DY259794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.304e-53 Identity = 70/86 (81.40%), Postives = 76/86 (88.37%), Query Frame = 1 Query: 1 DLTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 DLTN RFLVPE +FQPADLGMNQAGLAECIVRA+NSCH YL VLY+SIILTGGSTLFP+ ERLE ELRPLVPD + VKITTQE+ Sbjct: 294 DLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQED 379 HSP 2 Score: 85.8853 bits (211), Expect = 2.304e-53 Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 345 PLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFFH 470 P+LGVWRGGSLLASSPDF++MCVTKAEYEE GSARCRRRFFH Sbjct: 380 PILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFFH 421
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.854e-51 Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 4 LTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 LTN RFLVPEM+F P DLGMNQAGLAECIVRA+ +CHP+L VL+E IILTGGSTLFPRF ERLE+ELRPLVPDDYQVKI QE+ Sbjct: 303 LTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQED 387 HSP 2 Score: 78.1814 bits (191), Expect = 7.854e-51 Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 3 Query: 327 IFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFFH 470 I P+LG WRGGSLLA PDF++MC+TK+EYEE GS RCRRRFFH Sbjct: 382 IIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFFH 429
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.854e-51 Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 4 LTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 LTN RFLVPEM+F P DLGMNQAGLAECIVRA+ +CHP+L VL+E IILTGGSTLFPRF ERLE+ELRPLVPDDYQVKI QE+ Sbjct: 303 LTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQED 387 HSP 2 Score: 78.1814 bits (191), Expect = 7.854e-51 Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 3 Query: 327 IFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFFH 470 I P+LG WRGGSLLA PDF++MC+TK+EYEE GS RCRRRFFH Sbjct: 382 IIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFFH 429
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_DICDI (Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.539e-26 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 4 LTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKI 243 L N RF VPE++F P+D+GMNQAGLAE IV+++N + LH LY +IIL GGSTLFP ERLE ELR L P+ Y + I Sbjct: 365 LVNERFTVPELLFNPSDIGMNQAGLAESIVQSINCTNSNLHIPLYSNIILLGGSTLFPGLKERLELELRKLAPEQYNINI 444 HSP 2 Score: 41.2022 bits (95), Expect = 6.539e-26 Identity = 19/48 (39.58%), Postives = 26/48 (54.17%), Query Frame = 3 Query: 324 NIFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 NIF P+L GG LA PD+ ++K +YEE G C ++FF Sbjct: 443 NIFQPQDPILSPLYGGIRLAQQPDYLKYSISKQDYEEYGYNYCNKKFF 490
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 9.176e-21 Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 4 LTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQE 255 L N RF VPE++F P+D+G+ + G+ E IV ++ + + +++I+LTGG++LFP F ER+ E+R L P DY V + E Sbjct: 270 LANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRCLTPTDYDVSVVLPE 353 HSP 2 Score: 45.4394 bits (106), Expect = 9.176e-21 Identity = 17/47 (36.17%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 324 NIFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRF 464 ++ + +P+ W GG L++ + DF+ M VT+ +YEENG + C +F Sbjct: 348 SVVLPENPITYSWEGGKLISENDDFEDMVVTREDYEENGHSVCEEKF 394
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.194e-20 Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 4 LTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQE 255 L N RF VPE++F P+D+G+ + G+ E IV ++ + + +++I+LTGG++LFP F +R+ E+R L P DY V + E Sbjct: 270 LANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVVLPE 353 HSP 2 Score: 46.2098 bits (108), Expect = 1.194e-20 Identity = 17/47 (36.17%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 324 NIFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRF 464 ++ + +P+ W GG L++ + DF+ M VT+ +YEENG + C +F Sbjct: 348 SVVLPENPITYAWEGGKLISENDDFEDMVVTREDYEENGHSVCEEKF 394
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.417e-20 Identity = 35/84 (41.67%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 4 LTNVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQE 255 LTN RF VPE++F P+D+G+ + G+ E IV ++ + + +++I+LTGG+TLFP F +R+ E+R L P DY V + E Sbjct: 270 LTNERFAVPEILFHPSDIGIQEMGIPEAIVDSIQNLPEEMQPHFFKNIVLTGGNTLFPGFRDRVYSEVRCLTPTDYDVSVVLPE 353 HSP 2 Score: 41.2022 bits (95), Expect = 3.417e-20 Identity = 15/47 (31.91%), Postives = 29/47 (61.70%), Query Frame = 3 Query: 324 NIFVLSSPLLGVWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRF 464 ++ + +P+ W GG L++ + DF+ + VT+ +YEE+G C +F Sbjct: 348 SVVLPENPITYSWEGGKLISENDDFEDLVVTREDYEEHGHNICEEKF 394
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT3_DICDI (Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 8.009e-19 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE +FQP+ LGM AG+ E ++ C + LY +++L+GGST+FP A+R+ +EL L P ++KI E Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYSNVVLSGGSTMFPGIADRMNKELTALAPSTMKIKIIAPPE 335 HSP 2 Score: 43.1282 bits (100), Expect = 8.009e-19 Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS P FQ M ++K EY+E+G + R+ F Sbjct: 340 VWIGGSILASLPTFQQMWISKEEYDESGPSIVHRKCF 376
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_FUCVE (Actin OS=Fucus vesiculosus PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.290e-18 Identity = 30/83 (36.14%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE++FQP+ +GM +G+ +C + + C + LY +I+L+GG+T+FP ER+ +EL L P ++K+ E Sbjct: 253 NERFRCPEVLFQPSFIGMESSGIHDCTFKTIMKCDVDIRKDLYGNIVLSGGTTMFPGIGERMTKELTALAPSTMKIKVVAPPE 335 HSP 2 Score: 41.9726 bits (97), Expect = 2.290e-18 Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++KAEY+E+G + R+ F Sbjct: 340 VWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 376
BLAST of DY259794 vs. ExPASy Swiss-Prot
Match: ACT_FUCDI (Actin OS=Fucus distichus PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.290e-18 Identity = 30/83 (36.14%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 10 NVRFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 258 N RF PE++FQP+ +GM +G+ +C + + C + LY +I+L+GG+T+FP ER+ +EL L P ++K+ E Sbjct: 252 NERFRCPEVLFQPSFIGMESSGIHDCTFKTIMKCDVDIRKDLYGNIVLSGGTTMFPGIGERMTKELTALAPSTMKIKVVAPPE 334 HSP 2 Score: 41.9726 bits (97), Expect = 2.290e-18 Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 357 VWRGGSLLASSPDFQAMCVTKAEYEENGSARCRRRFF 467 VW GGS+LAS FQ M ++KAEY+E+G + R+ F Sbjct: 339 VWIGGSILASLSTFQQMWISKAEYDESGPSIVHRKCF 375 The following BLAST results are available for this feature:
BLAST of DY259794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259794 ID=DY259794; Name=DY259794; organism=Citrus clementina; type=EST; length=1076bpback to top |