DY259796

Overview
NameDY259796
Unique NameDY259796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1184
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1311 contig Ccv1_Contig1311:1..1184. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.568e-73
Identity = 141/168 (83.93%), Postives = 143/168 (85.12%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK FVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY+  ATDPTFLY A ALKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.917e-71
Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPS               KVVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+ ATDPTFLY A  LKE+ C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.794e-69
Identity = 128/168 (76.19%), Postives = 139/168 (82.74%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP  DKK F+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+E ATDPTFLY+A ALKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 4.419e-68
Identity = 130/168 (77.38%), Postives = 139/168 (82.74%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK FVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD CLVFAYYK+ A DPTFLY A ALKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.286e-67
Identity = 128/168 (76.19%), Postives = 138/168 (82.14%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPY+EIENGILWEV+GKWVVQGA+DVDIGANPS               KVVDIVDTFRLQEQP FDKK FVT+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+ ATDPTFLY +  LKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.679e-67
Identity = 126/168 (75.00%), Postives = 137/168 (81.55%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPS               +VVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYYKE + DP FLY+A  LKE+ C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 6.381e-67
Identity = 126/168 (75.00%), Postives = 136/168 (80.95%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQPAFDKK FVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYYK+ + DPTFLY+A  LKE+ C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 4.136e-66
Identity = 125/168 (74.40%), Postives = 135/168 (80.36%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKE +T+PTFLY A  LKEV C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 2.053e-65
Identity = 129/170 (75.88%), Postives = 138/170 (81.18%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXX--KVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            MLVYQDLL+GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPS                 KVVDIVDTFRLQEQP FDKK FVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKE ATDP F+Y A  LKEV C
Sbjct:    1 MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of DY259796 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 4.573e-65
Identity = 125/168 (74.40%), Postives = 137/168 (81.55%), Query Frame = 1
Query:   46 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKERATDPTFLYMADALKEVTC 549
            M+VYQDLL+GDELLSDSFPYKE+ NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKK F+ ++KR+IK L  KLSEERQ  FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+ ATDPTFLY AD LKEV C
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167          
The following BLAST results are available for this feature:
BLAST of DY259796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
TCTP_HEVBR1.568e-7383.93Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV1.917e-7179.17Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA1.794e-6976.19Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN4.419e-6877.38Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ1.286e-6776.19Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC1.679e-6775.00Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU6.381e-6775.00Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH4.136e-6674.40Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN2.053e-6575.88Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ4.573e-6574.40Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YD14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259796 ID=DY259796; Name=DY259796; organism=Citrus clementina; type=EST; length=1184bp
CGTTGATTGTTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGTT
GGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGATTCTTTTC
CCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTGG
GTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCGA
AGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTCG
ACATTGTCGACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAAGAAG
CCGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCAAGCT
GAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCGACCA
AGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTTGGGGAGAGC
ATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGGAACGTGCGAC
CGACCCAACATTTTTGTATATGGCTGATGCATTGAAGGAGGTGACGTGCT
AAGCTGCGGCTTCGAAAACGAAGTGCCTGGCTGATATTCCAATTTTAATT
TATCGCCCCGGTCTATTTCACGCACCTATTGCGGCGGTTTACTCCAAAAC
CAGTCCCTGCCCATTTTCACGATATAATTCGAAACCACAAATAACGTAAT
AGTTCCTCCCCATATCCTTTATTACACAACACATGCCTTCACTCGGTTGC
CCCCGCCGTTCGCCTAACCCAATCTCCTCGTTTTTTTTATTTTCCATAGA
CTGTAAATCATCCCTCTTCCCGCCAAACCTCCATACCTGCCTCGCCCCCC
CATCGCCTGAAGTTGCGTTTTCTTCATGTGCCCTTCACCTGGAATCATAT
CTATAGGAACCTTCTACAGCCTTCCCCAGTCCTCGGCACCCGTTCCCTCT
GTCCACCCGCCCCCTATATAACACAATCAACAAGAATATACTTATTGCTA
CTCCCTTTATGTATCATTCTTATATTGTCTTCCATTTTTCCTCTCTCCTT
AATGTTTATTTTATTGTTTTTTTTGTCCTTATTAGATGTTTTGGTTTTTA
CAGTCGACTATGTTCAACCCTTCACGTGTTTTTTGATCTTTCGGTAATGA
CCTATGAGGCTGTCCGTCTCGTCCCGCCCCTGCT
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