DY259819

Overview
NameDY259819
Unique NameDY259819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY259819_ssr401 microsatellite DY259819_ssr401:401..410. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14797 contig Ccv1_Contig14797:2..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 7.395e-39
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYK+EDEEHKKKVEAKNALENYA+NMRNT+QDEKIG KL  ADKKKIED+I+QAIQWL+ N LAEADEFED+MKELESIC+PIIAKMYQ
Sbjct:  525 VQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQ 618          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 8.177e-38
Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYK+EDEEHKKKVEAKNALENYA+NMRNT++DEKIG KL  ADKKK+ED+I++AIQWLD N L EADEFED+MKELES+C+PIIAKMYQ
Sbjct:  525 VQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQ 618          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.379e-37
Identity = 82/124 (66.13%), Postives = 89/124 (71.77%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQXXXXXXXXXXXXXXXXXXXXXXXXKIEEVD 373
            VQ   KYKAEDEE KKKVEAKN+LENYA+NMRNTV+DEKIGSKL   DKKKIEDA+DQAI WL+SN LAE DEFED+MKELE IC+PIIAKMYQ                        KIEEVD
Sbjct:  527 VQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDDAPPSGGSSAGPKIEEVD 650          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 75/94 (79.79%), Postives = 85/94 (90.43%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYK+EDEEHKKKVE+KNALENYA+NMRN V+DEKIG+KL  ADKKKIE+AID +IQWLD N LAEADEF+D+MKELESIC+PIIAKMYQ
Sbjct:  525 VQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQ 618          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.181e-36
Identity = 74/94 (78.72%), Postives = 84/94 (89.36%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYK+EDEEHKKKVEAKNALENYA+NMRNT++DEKI SKL   D+ KIEDAI+QAIQWLD N LAEA+EFED+MKELES+C+PIIAKMYQ
Sbjct:  525 VQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQ 618          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.014e-36
Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYK+EDEE KKKVEAKNALENYA+NMRNT++D+KI S+L  ADKK+IEDAID+AI+WLD+N LAEADEFED+MKELESIC+PIIAKMYQ
Sbjct:  525 VQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQ 618          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.995e-36
Identity = 72/94 (76.60%), Postives = 84/94 (89.36%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            VQ   KYK+EDEEHKKKV+AKNALENYA+NMRNT++DEKIG KL   DKKKIED+I+ AI+WL++N LAE DEFED+MKELESIC+PIIAKMYQ
Sbjct:  525 VQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQ 618          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.215e-34
Identity = 71/93 (76.34%), Postives = 80/93 (86.02%), Query Frame = 2
Query:    2 VQHL*KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMY 280
            VQ   KYKAEDEE KKKV+AKNALENYA+NMRNT++D+KI SKL   DKKKIEDA+D AI WLDSN LAE +EFED+MKELE IC+PIIAKMY
Sbjct:  521 VQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMY 613          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.920e-33
Identity = 65/89 (73.03%), Postives = 78/89 (87.64%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            +YKAEDEE KKKVEAKN+LENYA+NMRNT++DEKIG KL P +K+KIE A++ AIQWL+ N +AE DEFED+ KELE IC+PIIAKMYQ
Sbjct:  529 RYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQ 617          
BLAST of DY259819 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.548e-31
Identity = 62/89 (69.66%), Postives = 78/89 (87.64%), Query Frame = 2
Query:   17 KYKAEDEEHKKKVEAKNALENYAFNMRNTVQDEKIGSKLDPADKKKIEDAIDQAIQWLDSNPLAEADEFEDQMKELESICDPIIAKMYQ 283
            KYKAEDEE KKKVEAKNALENYA+NMRNT++D+KI  KLD  DK+KIE A+++AI+WL+ N LAE DE ED++KELE +C+PIIA++YQ
Sbjct:  532 KYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQ 620          
The following BLAST results are available for this feature:
BLAST of DY259819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP71_ARATH7.395e-3982.98Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH8.177e-3878.72Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC2.379e-3766.13Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7E_SPIOL4.058e-3779.79Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC1.181e-3678.72Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY2.014e-3678.72Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH9.995e-3676.60Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_MAIZE3.215e-3476.34Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN7.920e-3373.03Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA2.548e-3169.66Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259819 ID=DY259819; Name=DY259819; organism=Citrus clementina; type=EST; length=983bp
GGTTCAACACCTTTAGAAGTACAAAGCTGAAGACGAGGAGCACAAGAAGA
AGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTTCAATATGAGGAAC
ACTGTCCAGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAA
GAAGATTGAGGATGCCATTGATCAGGCAATTCAATGGCTTGATAGCAACC
CGCTGGCTGAGGCCGATGAATTTGAAGACCAGATGAAGGAGCTTGAGAGC
ATCTGCGATCCCATCATTGCCAAGATGTATCAAGGTGCTGGTGGTGATAT
GGGCGGTGGCATGGATGATGATGCTCCTCCAGCTGGAGGCAGTGCGGCCG
GTCCCAAGATTGAGGAAGTTGACCACGCTACCCGTTGCAGGATGTAGCGC
CACACACACACGAGTCCGCAACGCCATCCCCCGCGGAGCTCAAACTAGGA
CATCAAAACTCCTGGCCCCAGACCCAAAATCCACGGTCCCACTCGCCAGC
GGAAGCCAGGACCCCATTGACCCAGGTCATTCCCTAAACAAGAAGCCCCA
CCGCGCATACATACTCCCTAAAGCGGCGGACAATTCTACCCCGCAACCAC
CGACAGCTGGCAGAATCGACGACCTAACGAGCAGAGGCCAATTTCTGCTC
GGCCGTGACGTAGGTCTTGAACTTATGACCGTTCACCTCAATCGCCGTGC
CACTATGTTCAAATCCCCCGCACGCACCCGACCAGTCCTCCCCCCACATG
CAACACCTCCTCCCACTCCCCAACCATTCTACTTTCCTCTATGCATCTGG
TTCTCCTCATTTCGTTTTCCCCATTCCTCCCGCATACCCAAATACCCCTC
CTCGAATTGCACCCACACACGAACCGACCTGCTACACCACCGGCCCTACG
CCCGCACGACCCTGTTCATCTAGCTATTTCTTCCTACCTCATTCCTACAT
TCTGACCTGCACGGCCCAGTCGGGCTCTCATCC
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