DY259822

Overview
NameDY259822
Unique NameDY259822
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length987
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGH_ARATH (Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 6.121e-91
Identity = 140/203 (68.97%), Postives = 170/203 (83.74%), Query Frame = 1
Query:   73 LWIPIL-LCLFNELSFAEAESSTILLPSQQNNADSVSTTFSAHCPAPDPSLNYRPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPLIFNEPEEILFEKLELVNGILYTGGWAKNGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFPP 678
            +W+P++ L LF + S   A+++TILLPSQ     S S      C APDP+LNYRPVIGILSHPGDGASGRLSNAT+AS IAASYVK  ESGGARVIPLIFNEPEEILF+KLELVNG++ TGGWAK GLY++IV+KIF K+LE+ND G+HFP+YAICLGFELL+MI+S++R+I E  D  N AS+LQFV+N+NI+GT+FQRFPP
Sbjct:    5 VWLPLVALSLFKD-SIIMAKAATILLPSQTGFDISRSPV----CSAPDPNLNYRPVIGILSHPGDGASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQKLELVNGVILTGGWAKEGLYFEIVKKIFNKVLERNDAGEHFPIYAICLGFELLTMIISQNRDIFEKMDARNSASSLQFVENVNIQGTIFQRFPP 202          

HSP 2 Score: 74.3294 bits (181), Expect = 6.121e-91
Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 2
Query:  671 FPPELLKKLSTDCLVMQNHHYGLSPERMQANPELAKFFKILTTKHG*NK*RSMSSTSGSLNNYPVTPFPRASKKKCFLNGGPKANSPPQKDPLSG*THQAGKL 979
            FPPELLKKL TDCLVMQNH +G+SP+  + N  L+ FFKI+TT    N    +S+   +   YPVT F    +K  F  G  K   P  +D +    H A  L
Sbjct:  200 FPPELLKKLGTDCLVMQNHRFGISPQSFEGNIALSNFFKIVTTCVDDNGKVYVSTVQST--KYPVTGFQWHPEKNAFEWGSSKI--PHSEDAIQVTQHAANHL 298          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGH_SOYBN (Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.110e-67
Identity = 118/193 (61.14%), Postives = 138/193 (71.50%), Query Frame = 1
Query:   97 LFNELSFAEAESSTILLPSQQNNADSVSTTFSAHCPAPDPSLNYRPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPLIFNEPEEILFEKLELVNGILYTGGWAKNGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFP 675
            LF  L  A +    I LPSQ ++ DSVS      C A DPSLNY+PVIGIL+HPGDGASGRLSNAT  SYIAASYVKFVESGGARVIPLI+NE  E L +KL+LVNG+L+TGGWA +G Y D +  IFKK LE+ND GDHFPV A  LG  L+  IVSE  +ILE F  ++  S+L      N +G+LFQRFP
Sbjct:   15 LFTCLLSATSHDDHIFLPSQLHDDDSVS------CTATDPSLNYKPVIGILTHPGDGASGRLSNATGVSYIAASYVKFVESGGARVIPLIYNESPENLNKKLDLVNGVLFTGGWAVSGPYLDTLGNIFKKALERNDAGDHFPVIAFNLGGNLVIRIVSEQTDILEPFTASSLPSSLVLWNEANAKGSLFQRFP 201          

HSP 2 Score: 58.151 bits (139), Expect = 2.110e-67
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 2
Query:  671 FPPELLKKLSTDCLVMQNHHYGLSPERMQANPELAKFFKILTTKHG*NK*RSMSSTSGSLNNYPVT 868
            FP +LL +L TDCLV+ NH Y +SP ++Q N +L+ FF+IL T    +    +S+  G    YPVT
Sbjct:  200 FPSDLLTQLKTDCLVLHNHRYAISPRKLQYNTKLSDFFEILATSGDRDGKTFVSTARG--RKYPVT 263          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGHA_DICDI (Gamma-glutamyl hydrolase A OS=Dictyostelium discoideum GN=gghA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.275e-26
Identity = 49/140 (35.00%), Postives = 89/140 (63.57%), Query Frame = 1
Query:  220 LNYRPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPLIFNEPEEILFEKLELVNGILYTGG---WAKNGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQF 630
            +N RP+IGIL+ P DG          + YIAASYVK++ES GARV+P++++   + L E +  +NG+ + GG   +    +Y D ++ I+ +++E N+ GD+FP++  C+GF+ L+++ +++ N+L +++  N    L F
Sbjct:   26 INNRPIIGILTQPTDGDM----TTFGSQYIAASYVKYIESAGARVVPILYDIDIKSLTELMGSINGVFFPGGGVDFNNQTVYTDTIQSIWSQVVEFNNNGDYFPLWGTCMGFQELALLSADNFNLLSSYNSENYTVPLNF 161          

HSP 2 Score: 35.8094 bits (81), Expect = 5.275e-26
Identity = 13/39 (33.33%), Postives = 25/39 (64.10%), Query Frame = 2
Query:  683 LLKKLSTDCLVMQNHHYGLSPERMQANPELAKFFKILTT 799
            +++ L+++ + M NH +GLSP+  Q    +  FF +L+T
Sbjct:  178 IMQSLASEPITMNNHQFGLSPQTYQQTSSINTFFDVLST 216          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGH_MOUSE (Gamma-glutamyl hydrolase OS=Mus musculus GN=Ggh PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.334e-23
Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  229 RPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPLIFNEPEEILFEKLELVNGILYTGGWAK--NGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFP 675
            RP+IG++     G   +L N     YIAASYVK++ES GARV+P+  +  +    E    +NG+L  GG A   +  Y  + +  F K LE  D G HFPV+  CLGFE LS++VS + N+L + D  ++   L F +    +  +F+ FP
Sbjct:   33 RPIIGVVMQECFGKMAKLGNY----YIAASYVKYIESAGARVVPIRPDLSDAEYEELFRSINGVLLPGGGANLTDSGYSRVAKIFFSKALESFDNGGHFPVWGTCLGFEELSVLVSGE-NLLTSTDTKSKKLPLNFTEGAR-KNKMFKHFP 177          

HSP 2 Score: 39.6614 bits (91), Expect = 1.334e-23
Identity = 28/72 (38.89%), Postives = 34/72 (47.22%), Query Frame = 2
Query:  650 KEHCSKDFPPELLKKLSTDCLVMQNHHYGLSPERMQANPELAKFFKILTTKHG*NK*RSMSSTSGSLNNYPV 865
            K    K FP ELL  L+ + L    H + LS +    N +L KFF ILTT     K   +SS  G    YPV
Sbjct:  169 KNKMFKHFPTELLDSLALENLTANFHKWSLSVKNFTENEKLKKFFNILTTNTD-GKTEFISSMEGF--KYPV 237          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGH_RAT (Gamma-glutamyl hydrolase OS=Rattus norvegicus GN=Ggh PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.750e-20
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 1
Query:  229 RPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIP--LIFNEPE-EILFEKLELVNGILYTGGWAK--NGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFP 675
            RP+IGI+     G   +L       YIAASYVKF+ES GARV+P  L  N+ + E LF     +NG+L  GG A   +  Y  + +  F K LE  D GD+FPV+  CLG E LS++VS D N+L   + ++    L F ++ + +  +F+  P
Sbjct:   33 RPIIGIIMQECYGNMTKLGRF----YIAASYVKFIESAGARVVPIRLDLNDAQYETLFRS---INGVLLPGGGANLTHSGYSRVAKIFFTKALESFDNGDYFPVWGTCLGLEELSVLVSND-NLLTLTNTSSVKLPLNFTRD-SKQSRMFRNLP 177          

HSP 2 Score: 35.4242 bits (80), Expect = 2.750e-20
Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = 2
Query:  665 KDFPPELLKKLSTDCLVMQNHHYGLSPERMQANPELAKFFKILT 796
            ++ P ELL  L+++ L    H + LS +    N +L KFF ILT
Sbjct:  174 RNLPEELLNSLASENLTANFHKWSLSVKNFTENEKLKKFFNILT 217          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGH_HUMAN (Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.577e-20
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 1
Query:  229 RPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPLIFNEPE---EILFEKLELVNGILYTGGWA--KNGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFP 675
            +P+IGIL         ++       YIAASYVK++ES GARV+P+  +  E   EILF+    +NGIL+ GG    +   Y  + +  +   ++  D GD+FPV+  CLGFE LS+++S +  +L   D  + A  L F     +   +FQ FP
Sbjct:   33 KPIIGILMQK---CRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKS---INGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGE-CLLTATDTVDVAMPLNFTGG-QLHSRMFQNFP 178          

HSP 2 Score: 37.7354 bits (86), Expect = 3.577e-20
Identity = 18/45 (40.00%), Postives = 26/45 (57.78%), Query Frame = 2
Query:  665 KDFPPELLKKLSTDCLVMQNHHYGLSPERMQANPELAKFFKILTT 799
            ++FP ELL  L+ + L    H + LS +    N +L KFF +LTT
Sbjct:  175 QNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTT 219          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGHB_DICDI (Gamma-glutamyl hydrolase B OS=Dictyostelium discoideum GN=gghB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.618e-17
Identity = 53/156 (33.97%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  217 SLNYRPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPLIFNEPEEILFEKLELVNGILYTGG---WAKNGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFP 675
            ++N  PVIGIL+ P   +   ++     +Y+ ASYVK+VES GARV+P+ +N+ +E L    + +NGIL  GG   +     Y   +  I+  +L+ N  GD+FP++  CLG E +  + +E  ++L  F+  N +  L F  NI +E  + +  P
Sbjct:   22 TINNTPVIGILTQPFPSS---INIKYGDNYLMASYVKYVESAGARVVPIFYNQDDESLTTIFKQINGILLPGGDVDFKTEIQYVKTLTLIWDYVLDVNINGDYFPLWGTCLGLEEIVSLQAESFDVLTDFNAENYSIPLNF-SNIALESKIMKNCP 173          
BLAST of DY259822 vs. ExPASy Swiss-Prot
Match: GGH_BOVIN (Gamma-glutamyl hydrolase OS=Bos taurus GN=GGH PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.407e-15
Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  202 PAPDPSLNYRPVIGILSHPGDGASGRLSNATNASYIAASYVKFVESGGARVIPL---IFNEPEEILFEKLELVNGILYTGGWAK--NGLYYDIVEKIFKKILEKNDVGDHFPVYAICLGFELLSMIVSEDRNILETFDGANQASTLQFVKNINIEGTLFQRFP 675
            PAP P    +P+IGIL       + R   A    YIAASYVKF+ES GARV+P+   + NE  E LF+    +NG+L+ GG        Y  + +  +   ++    GD+FPV+  CLGFE L  +VS + ++L   D       L F +   ++  +FQ FP
Sbjct:   27 PAPTPK---KPIIGILMQKCHNKNMR---ALGKYYIAASYVKFLESAGARVVPVRLDLKNEEYEKLFKS---INGVLFPGGSVNLMRSGYARVAKMFYNLSIKSFGEGDYFPVWGTCLGFEELIYLVSGE-SLLTLTDTVGIKLPLNFSRG-TLQSRMFQNFP 178          
The following BLAST results are available for this feature:
BLAST of DY259822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GGH_ARATH6.121e-9168.97Gamma-glutamyl hydrolase OS=Arabidopsis thaliana G... [more]
GGH_SOYBN2.110e-6761.14Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1[more]
GGHA_DICDI5.275e-2635.00Gamma-glutamyl hydrolase A OS=Dictyostelium discoi... [more]
GGH_MOUSE1.334e-2337.75Gamma-glutamyl hydrolase OS=Mus musculus GN=Ggh PE... [more]
GGH_RAT2.750e-2038.96Gamma-glutamyl hydrolase OS=Rattus norvegicus GN=G... [more]
GGH_HUMAN3.577e-2035.71Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE... [more]
GGHB_DICDI1.618e-1733.97Gamma-glutamyl hydrolase B OS=Dictyostelium discoi... [more]
GGH_BOVIN4.407e-1536.20Gamma-glutamyl hydrolase OS=Bos taurus GN=GGH PE=2... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YE22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259822 ID=DY259822; Name=DY259822; organism=Citrus clementina; type=EST; length=987bp
TACGTTTGCTTTCTACCAAGTATTTTTCCCAAAATGCCCTCGTCTCCCAC
CAGGCGGAAGCCGCGGAACTGCCTCTGGATTCCGATTCTCCTGTGCCTAT
TCAACGAACTTTCTTTCGCTGAAGCCGAGTCGTCGACGATTCTTCTACCG
AGTCAACAGAACAATGCTGACTCAGTGAGTACTACCTTCTCTGCTCATTG
TCCTGCTCCCGATCCGAGTTTGAATTACCGGCCGGTGATCGGTATTCTAA
GTCATCCAGGCGACGGCGCTTCGGGGAGGCTGAGTAACGCCACCAACGCG
TCTTATATCGCCGCGTCGTACGTGAAGTTCGTTGAATCAGGAGGCGCTCG
TGTCATCCCTCTCATTTTCAATGAACCCGAAGAGATTCTTTTTGAGAAGC
TTGAATTGGTGAACGGTATACTGTATACTGGCGGTTGGGCTAAAAACGGT
TTGTACTACGATATTGTTGAAAAAATTTTCAAGAAAATTTTAGAGAAGAA
TGATGTGGGCGATCATTTTCCAGTATATGCCATTTGCTTAGGCTTTGAAC
TTTTATCAATGATCGTTAGCGAGGACAGAAACATTCTGGAAACATTTGAT
GGAGCAAATCAGGCATCTACCCTCCAATTCGTCAAAAACATTAATATTGA
AGGAACATTGTTCCAAAGATTTCCCCCCGGAGCTGCTTAAGAAGTTGAGT
ACGGATTGCCTGGTTATGCAAAACCACCATTATGGGCTTTCCCCCGAAAG
AATGCAAGCCAACCCGGAACTAGCTAAATTTTTTAAGATCTTGACCACCA
AGCATGGATGAAATAAATAAAGGTCTATGTCCTCGACCAGTGGCAGCCTT
AATAACTATCCTGTGACCCCCTTCCCAAGGGCATCCAAAAAAAAATGCTT
TTTGAATGGGGGGCCCAAAGCCAATTCCCCCCCACAAAAGGACCCCCTTT
CGGGGTGAACCCACCAAGCCGGAAAACTTTTTTTAAA
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