DY259824

Overview
NameDY259824
Unique NameDY259824
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1001
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1321 contig Ccv1_Contig1321:1..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.096e-45
Identity = 100/150 (66.67%), Postives = 113/150 (75.33%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MSSTFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.096e-45
Identity = 100/150 (66.67%), Postives = 113/150 (75.33%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MSSTFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.441e-45
Identity = 99/150 (66.00%), Postives = 113/150 (75.33%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            M+STFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.212e-44
Identity = 98/150 (65.33%), Postives = 111/150 (74.00%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            M STFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+ KSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MPSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.212e-44
Identity = 98/148 (66.22%), Postives = 111/148 (75.00%), Query Frame = 2 
Query:  131 STFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            STFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    2 STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 148
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.582e-44
Identity = 98/150 (65.33%), Postives = 111/150 (74.00%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MSS FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AK YYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.582e-44
Identity = 98/150 (65.33%), Postives = 111/150 (74.00%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MSS FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AK YYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.067e-44
Identity = 97/150 (64.67%), Postives = 112/150 (74.67%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MS+ F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.067e-44
Identity = 97/150 (64.67%), Postives = 112/150 (74.67%), Query Frame = 2 
Query:  125 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            MS+ F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 149
[Close]
BLAST of DY259824 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.699e-44
Identity = 98/149 (65.77%), Postives = 111/149 (74.50%), Query Frame = 2 
Query:  128 SSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPRAKSYYLFDGYAHLSSGLACGPAGLYVGRVRELFVMPVLRLSSKSPPLFMYIAVNVSFVLKGLNFYGI 574
            SS FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII+TGINP+AKSYYLFDGYAHLSSGLACG AGL  G    +     +R +++ P LF+ + + + F  + L  YG+
Sbjct:    3 SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFA-EALALYGL 150
The following BLAST results are available for this feature:
BLAST of DY259824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_KALDA1.096e-4566.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI1.096e-4566.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH2.441e-4566.00V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_TOBAC1.212e-4465.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_ARATH1.212e-4466.22V-type proton ATPase 16 kDa proteolipid subunit c1... [more]
VATL_ORYSJ1.582e-4465.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI1.582e-4465.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MESCR2.067e-4464.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU2.067e-4464.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH2.699e-4465.77V-type proton ATPase 16 kDa proteolipid subunit c4... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259824 ID=DY259824; Name=DY259824; organism=Citrus clementina; type=EST; length=1001bp
CTCACGAGAGACAATTTAATCAAAGCTAATCGGGAGCAGAATTCTGTGCT
ATCCGGGAATTACTTAAAACTTGCGATTACGACTACTCAGATCTTCGTAG
CAAACAGGCAAAATCATCATCGCCATGTCATCGACTTTCTCCGGCGACGA
AACTGCTCCCTTCTTCGGCTTCCTTGGAGCAGCGGCCGCTCTCGTCTTCT
CCTGTATGGGTGCTGCCTATGGGACAGCAAAGAGTGGGGTTGGAGTGGCT
TCAATGGGTGTCATGAGGCCGGAGCTTGTTATGAAATCGATTGTTCCAGT
GGTTATGGCTGGAGTTTTGGGTATTTATGGGTTGATTATTGCTGTTATTA
TTACTACTGGGATCAACCCTAGAGCTAAGTCTTATTATTTGTTTGATGGG
TATGCACATTTGTCTTCGGGGCTTGCTTGTGGTCCGGCCGGACTCTACGT
CGGTAGGGTTCGGGAATTGTTCGTGATGCCTGTTCTACGCCTCTCGTCTA
AAAGCCCACCTCTGTTTATGTACATAGCTGTGAATGTTTCTTTTGTGCTC
AAAGGCCTTAATTTCTACGGTATTTAGGAAATCAATCCGAGGTATCCACT
TGTAAAGATGAACTGCTTGTAAGAAACAAACACCAAGCCTACAGGGACCC
ACCTGTCCGACTCATTCCCCCCACTCTAGTTCCGCAATTCTGTCTCTTTG
CGCATATTCGGCAATCTGAAGCAATTGGCCCAACACGGCGGTTGCCGAGC
CGCCGCGGCCCTGGCCTACCGCGCCCATTCCATCACTCACCTAGAGTACA
CTCCACCTTCACACCTTTCCCTCGTTAACCATCTAAATCTTTAAAAATAT
CACTTACACATCAGTAAATTTGGGATGGGTACTTCACTAGAACTGTTCTC
TATCCATCCATCTCTCTTTTTAACTTCCCTCTCATCTTATGGTTTTCTAG
CCTATCCTGTAAGTCTACATATGATACTGCGATTCCATATTCAATCGCGA
T
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