DY259834

Overview
NameDY259834
Unique NameDY259834
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1022
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259834 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.788e-12
Identity = 79/270 (29.26%), Postives = 116/270 (42.96%), Query Frame = 1
Query:    7 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGIPAATGDFLESHEVINWTFNS 762
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VG   +TG ++++H +++WTFNS
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272          
BLAST of DY259834 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.360e-11
Identity = 70/241 (29.05%), Postives = 103/241 (42.74%), Query Frame = 1
Query:   79 ISFSFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGIPAATG---DFLESHEVINWTFNS 762
            ISFSF  F   + DN TL     I  SG L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE DT  N                  + N + S+      L +G+   V I Y+     L V   Y     +  + + +++  ++P  V VG+  ATG   D  E+H+V +W+F +
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235          
The following BLAST results are available for this feature:
BLAST of DY259834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LEC2_CLALU2.788e-1229.26Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LEC_ERYCG2.360e-1129.05Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YF14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259834 ID=DY259834; Name=DY259834; organism=Citrus clementina; type=EST; length=1022bp
CAAAAAATGATTTTCTTACTACTCCTCTCCGTTTTTCTTCGCGGAGCTTC
TTCATCAATCCTTTCCGAAGACACACCTATTAGCTTCTCATTTCCCTCAT
TCGCCAAAGACAGTTGTGACAATAAGACCCTCATTTGCTACGGAGCGATT
GAAAGTTCCGGCGCCTTAAGCATCACACCAGGCCCTCCACCAAACCTGCC
GATCAGAAAGGTTGGACGGGTTTTATACGGCAAGCCTCTGAGTTTACAGC
GATCTTTTATTGATACCACCATCACCATTAAGATCTCACGCCATCAGAAT
TACACTGATCGTGCCGGAGATGGCATGACGTTCATTTTTGCAAGCGATAA
AAACGGTCCATCAGCAAAGGGCGTCGGCGAATATCTTGGACTGCAGTCTT
CACCAGGCGATAAATTTCCTCCATTAGCCGTGGAGCTGGACACATGCCTG
AACAAGAACCTGAATGATCCAGATGATAACCATATTGGCATCGACATAAA
CGGAATCGAATCAAATCCAGTTAATAGTCTGCTTGACGTTGATCTCAAAA
GTGGACGAGCAATCCAGGTTCGAATTTATTACAATCCAGACTTTGGACAA
CTCTCTGTTTATGCGGCATATTCGGGGGAAACACTTGTGAAGGTGGTTGA
AAAACCCATTAACCTGTCAGATATAATTCCCACGCCCGTCTATGTTGGAA
TCCCAGCAGCTACGGGGGACTTTTTAGAAAGCCATGAGGTTATAAATTGG
ACCTTCAACTCCTTCCCCGTGGCCGCTTCTCTCCAGGGAAAAAACCTGGT
GATGCCAAAATAATTCAAAACCGTCCTTGGAAAACGCAGGTCCCTAAATT
ATAATCCAATAATAATTAATATCCCCAAAAAGGTGGCCGGGGTCCTTGGC
TTAAAATATTTGAAAAAAAGGAAACCGGCGATAAGGGATTAATACCGTTT
GCCCGGCTGGCTGAAAAGGTACCGGTAGGGGCTTAGGGAAAAAAGGCCCC
AAAATTTGCGCTTCAAATGGAT
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