DY259840

Overview
NameDY259840
Unique NameDY259840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length858
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1327 contig Ccv1_Contig1327:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: AHP6_ARATH (Histidine-containing phosphotransfer protein 6 OS=Arabidopsis thaliana GN=AHP6 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.585e-40
Identity = 75/100 (75.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query:  328 SSPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELFK 627
            +SPNFV +V+NIYF ESEKLLRNLR LLMD+EFSDYKK+G+HLNQ++GSSSSIGA+RV NVCVAFR+ASE +NR GCLR LE++EHEY YL N  HELF+
Sbjct:   40 TSPNFVYDVINIYFDESEKLLRNLRLLLMDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYHYLKNMMHELFQ 139          

HSP 2 Score: 29.6462 bits (65), Expect = 1.585e-40
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  621 FQIEAQRELAAGVRYP 668
            FQ+E QR LAAGVRYP
Sbjct:  138 FQLEQQRILAAGVRYP 153          
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: AHP1_ARATH (Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 46/100 (46.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  328 SSPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELFK 627
            S+P+FVS+VV ++F +S+++L +L SL +D++  D+KK+  H++Q+ GSSSSIGA+RV N CV FR+  EQ N   C R L+ ++ EY  + N+   LFK
Sbjct:   37 SNPDFVSQVVTLFFQDSDRILNDL-SLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNRLETLFK 135          
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: AHP5_ARATH (Histidine-containing phosphotransfer protein 5 OS=Arabidopsis thaliana GN=AHP5 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16
Identity = 39/98 (39.80%), Postives = 66/98 (67.35%), Query Frame = 1
Query:  331 SPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELF 624
            +P+FV+EVV+++F +  KL+  +   L   +  D+K++   ++Q+ GSSSS+GA+RV NVC++F+   +  NR GCLR L+ +++EY  L  K  +LF
Sbjct:   41 TPDFVAEVVSLFFDDCSKLINTMSISLERPDNVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEYKMLKTKLQDLF 138          
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: AHP2_ARATH (Histidine-containing phosphotransfer protein 2 OS=Arabidopsis thaliana GN=AHP2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 39/98 (39.80%), Postives = 63/98 (64.29%), Query Frame = 1
Query:  331 SPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELF 624
            SP+FVSEV++++F +  KL+ N+   L      D+ ++G  ++Q+ GSSSS+GAKRV  +CV+F+   E  N  GC+R L+ ++ EY  L  K  ++F
Sbjct:   40 SPDFVSEVLSLFFEDCVKLISNMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKTKLQDMF 137          
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: AHP3_ARATH (Histidine-containing phosphotransfer protein 3 OS=Arabidopsis thaliana GN=AHP3 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query:  331 SPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELF 624
            SP+FV+EVV ++F + EKL+ N+   L      D+K +G  ++Q+ GSSSS+GAKRV  +CV  +   +  N  GC+R L+ ++ EY  L  K  +LF
Sbjct:   40 SPDFVAEVVTLFFEDCEKLISNMARALDQTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYKTLKAKLQDLF 137          
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: AHP4_ARATH (Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:  328 SSPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELFK 627
            ++PNFV EV  +YF +S +L+ N+   L    F D+ +L  +++Q  GSS+SIGA +V   C  FR      N  GCLR  + L+ E+  L  K    F+
Sbjct:   26 ANPNFVEEVSALYFKDSARLINNIDQALERGSF-DFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQ 124          
BLAST of DY259840 vs. ExPASy Swiss-Prot
Match: HP1_ORYSJ (Histidine-containing phosphotransfer protein 1 OS=Oryza sativa subsp. japonica GN=HP1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 31/99 (31.31%), Postives = 65/99 (65.66%), Query Frame = 1
Query:  331 SPNFVSEVVNIYFHESEKLLRNLRSLLMDKEFSDYKKLGIHLNQMMGSSSSIGAKRVSNVCVAFRAASEQNNRAGCLRALELLEHEYCYLNNKFHELFK 627
            +P FVSEVV ++  ++++++  + +LL ++   ++ K+  +++Q+ GSS+S+GA++V   C+ FR   +  +R GCL AL ++ +++  L NKF  + +
Sbjct:   39 TPGFVSEVVTLFCDDADRIINEIATLL-EQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRNDFYDLRNKFQTMLQ 136          
The following BLAST results are available for this feature:
BLAST of DY259840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
AHP6_ARATH1.585e-4075.00Histidine-containing phosphotransfer protein 6 OS=... [more]
AHP1_ARATH2.375e-1946.00Histidine-containing phosphotransfer protein 1 OS=... [more]
AHP5_ARATH1.103e-1639.80Histidine-containing phosphotransfer protein 5 OS=... [more]
AHP2_ARATH1.220e-1539.80Histidine-containing phosphotransfer protein 2 OS=... [more]
AHP3_ARATH2.081e-1540.82Histidine-containing phosphotransfer protein 3 OS=... [more]
AHP4_ARATH3.673e-1237.00Histidine-containing phosphotransfer protein 4 OS=... [more]
HP1_ORYSJ1.396e-1131.31Histidine-containing phosphotransfer protein 1 OS=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YF23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259840 ID=DY259840; Name=DY259840; organism=Citrus clementina; type=EST; length=858bp
GACACAAAACCCCTTTCCCTGAAACAAGTTAAGTGAAAAGCAAAATCTAT
AAACAAATTAATAGCCAAGTTTTGAAGAATTAGACAAAACGGGTCTTCCT
TTGTGGATGCTTGGCTTGGATCCGGATCGGTTGCGAGCCGATATGAACCG
TTTGCTCGCTTTACTCTTCCACCAGGTAATTCTGATCATCGTGCGTAATC
TTGANTTTTGCTTTCTTTGTTTTGTTGTTTTGGTTGCTGCTGCTGAAAGT
CTACTGCTGCAAATGATCATCAAATGTAGGGAGTGTTGGATGAGCAGTTC
TTGCAACTGCAGCAACTTCAAGATGAGAGCTCCCCTAACTTTGTTTCTGA
AGTTGTCAACATTTACTTCCATGAATCAGAGAAGCTTTTGAGGAATCTCA
GATCGCTACTGATGGATAAAGAGTTTTCAGATTACAAGAAATTGGGAATC
CATTTGAATCAGATGATGGGTAGCAGCTCAAGCATTGGTGCCAAACGAGT
CAGCAACGTTTGCGTTGCCTTTCGAGCCGCTTCTGAACAGAATAACCGTG
CTGGGTGCTTGAGAGCTTTAGAGCTGCTAGAACATGAGTACTGCTACCTC
AACAACAAATTCCATGAACTTTTCAAATAGAAGCACAGAGAGAACTGGCA
GCTGGAGTTCGATATCCATGGCCATGTAGAACAAATTAAAATAACAAGAA
CTAACTCTGGCTGCCTGCTGAACAAGCTAACAAGCTCCCCCGGATTCCCT
TTTGTTCAATGGTCTTGCCTAAAACCCCGGCAAGCCCCCCTCCTGCCCCC
AAAAGAGGGAACTACAGAAAACCGATAATCTATCACGGCGTCACGCCCCC
CCCCTTTA
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