DY259841

Overview
NameDY259841
Unique NameDY259841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length988
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.363e-29
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +D++RR+G  V VA +  +  V     V +  D  + D +    +D++ LPGG  GA NL ES V++ I+K+Q S   L AAICA P  AL +  +  G K T +P   +++      +  ESRV++DG ++TSRGPGT+ EF +A+VE L GKE AD+V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAADQVKAPLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.148e-29
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQL---APACAATVESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I  DV+RR+G  V VA +  +  V     V +  DA + D R +  +D+I LPGG  GA NL ES  ++ I+K Q S   L AAICA P  AL + G+  G K   +P   +++   A  C +  ESRV++DG ++TSRGPGT+ EF +A+VE L GKE A++V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPT-ALLAHGIGFGSKVITHPLAKDKMMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLI 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.011e-27
Identity = 73/184 (39.67%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +DV+RR+G  V VA +  +  V     V +  D  + D +    +D++ LPGG  GA NL ES +++ I+K+Q S   L AAICA P  AL +  +  G K T +P   +++      +  ESRV++DG ++TSRGPGT+ EF +A+VE L GK+ A++V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPT-ALLAHEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMANQVKAPLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.321e-27
Identity = 72/184 (39.13%), Postives = 109/184 (59.24%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDC-RDAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQL-APACAATVESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +DV+RR+G  V VA +  +  V     V +  D+ + D  +   +D++ LPGG+ GA NL ES  ++ ++K Q     L AAICA P  AL + G+  G   T +P   +++ A       E+RVQ+DG V+TSRGPGT+ EF + +VE+L G E A +V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPT-ALLAHGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQVKAPLI 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.725e-27
Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +DV+RR+G  V VA +  +  V     V +  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AAICA P  AL +  +  G K T +P   +++      T  E+RV++DG ++TSRGPGT+ EF +A+VE L GKE A +V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.725e-27
Identity = 73/184 (39.67%), Postives = 111/184 (60.33%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +DV+RR+G  V VA +  +  V     V +  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q     L AAICA P  AL +  +  G K T +P   +++      +  E+RV++DG ++TSRGPGT+ EF + +VE L GKE AD+V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVADQVKAPLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.253e-27
Identity = 73/184 (39.67%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +DV+RR+G  V +A +  +  V     V +  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AAICA P  AL +  +  G K T +P   +++      T  E+RV++DG ++TSRGPGT+ EF +A+VE L GKE A +V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.460e-26
Identity = 70/184 (38.04%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  142 KKVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQLRVDACHGVKVVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            K+ LV +A G+E +E +I +D++RR+G  V VA +  +  V     V +  D  + + +    +D++ LPGG  GA NL ES +++ I+K+Q +   L AAICA P  AL +  +  G K T +P   +++      +  ESRV++DG ++TSRGPGT+ EF +A+VE L GK+ A++V  PL+
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPT-ALLAHEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMANQVKAPLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 5.194e-24
Identity = 71/183 (38.80%), Postives = 109/183 (59.56%), Query Frame = 1
Query:  151 LVPVANGSEPIEALITIDVLRRSGADVAVASVETQ--LRVDACHGVKVVADALVSDCRDAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDG--KVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            LV +A GSE  EA+ TID+L R G  V  ASV +   L +    GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+    GR+ AAICA+PA  L    +      T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F + +++ L G+EKA EV+  L+
Sbjct:    6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLV 186          
BLAST of DY259841 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.501e-23
Identity = 70/185 (37.84%), Postives = 109/185 (58.92%), Query Frame = 1
Query:  145 KVLVPVANGSEPIEALITIDVLRRSGADVAVASVETQ--LRVDACHGVKVVADALVSDCRDAVFDLIALPGGMPGATNLKESEVLESIVKKQASDGRLYAAICASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDG--KVVTSRGPGTTMEFVVALVEQLYGKEKADEVSGPLL 687
            + LV +A GSE  EA+ TID+L R G  V  ASV +   L +    GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+    GR+ AAICA+ A  L    +      T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F + +++ L G+EKA EV+  L+
Sbjct:    4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLV 186          
The following BLAST results are available for this feature:
BLAST of DY259841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PARK7_MESAU5.363e-2940.76Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_CHICK9.148e-2942.47Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_MOUSE1.011e-2739.67Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_DANRE1.321e-2739.13Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_HUMAN1.725e-2740.22Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_BOVIN1.725e-2739.67Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_CERAE2.253e-2739.67Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_RAT1.460e-2638.04Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
THIJ_ECOLI5.194e-2438.80Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY7.501e-2337.84Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YF24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259841 ID=DY259841; Name=DY259841; organism=Citrus clementina; type=EST; length=988bp
TTAATAAGCGTTCGCCACGTCACTCCTCACTCTCTTCTTCGTCACTTTCC
TCTCACTCAACATTTTCTCCCCAAACAAATTCCTGCTTTGAAAAATCGCA
TTTTCTCCTTCACAGCAACAGCTACAATGTCTTCAACTTCCAAAAAGGTT
TTGGTGCCTGTTGCGAACGGGAGTGAGCCGATTGAGGCTTTGATAACGAT
CGATGTTTTGAGAAGGTCTGGAGCAGACGTCGCGGTTGCGTCTGTGGAGA
CACAGCTTCGTGTCGACGCGTGTCATGGTGTCAAGGTTGTCGCTGATGCT
CTGGTGTCTGACTGCCGCGACGCCGTTTTTGATCTTATAGCTCTTCCCGG
TGGCATGCCCGGTGCTACCAATCTGAAAGAATCTGAAGTATTAGAAAGCA
TTGTGAAGAAGCAGGCTTCAGATGGGCGTCTTTATGCTGCTATCTGTGCT
TCACCTGCTGTGGCGTTAGGGTCTTGGGGTCTGTTGAAGGGATTGAAGGC
TACTTGTTATCCATCATTTATGGAGCAATTAGCTCCTGCTTGTGCAGCAA
CTGTTGAATCAAGAGTACAGCAGGATGGTAAAGTTGTTACGAGTCGTGGA
CCGGGCACTACCATGGAGTTTGTCGTTGCACTTGTTGAGCAGTTGTATGG
GAAAGAGAAAGCTGATGAAGTTTCTGGGCCACTGTTGGAAGTTTCAGAGG
CTAATGTATTCAAGAAAATAAGTTCAGGGAAAGAGTATGACTTTTTGCAT
TAATGATTCATTAGATGAAATTGCATACCTGCTGGGTCCATCAAAGGGGG
GGAAAACAATGTTTTGATTTAATTAATGGGAACCCTGAAAAATGCATTTG
TTGAACTTCAATGTCCCCCCTGAAAAAATTCCTTTTAAAGGAAATTTCTT
TCTCTGGGTAATTTGAATTTAAATTTTCTGGTTCCCCAGGGCTTTCCCCC
TTTCCCGGCCCCCTTGGGCCCAAAGGGAAAGGGCTTGC
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