DY259854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35 Identity = 75/120 (62.50%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWD-YSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKAPAT 357 RDFG TQFGSGWAWL Y+ P P E D L+V+K+PNAVNPLVW Y PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSW++VS RLE AKA T Sbjct: 128 RDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDE-DNKLVVLKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 246
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.217e-31 Identity = 68/116 (58.62%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 348 RDFG TQFGSGWAWL YK ++K L +VKTPNA NPLV Y+PLLTIDVWEHAYYLDFQNRRPDYIS+FM+KLVSWE+VS RL++A A Sbjct: 103 RDFGSYDAFVKEFKAAAATQFGSGWAWLAYKP----------------EEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 122.479 bits (306), Expect = 1.487e-27 Identity = 65/116 (56.03%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 348 RDF TQFG+GWAWL Y ++ L VVKTPNAVNPLV PLLTIDVWEHAYYLDFQNRRPDYI FM LVSWE+VS RLE+AKA Sbjct: 112 RDFTSYEKFYEEFNAAAATQFGAGWAWLAYS------------------NEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.761e-20 Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 4 DFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 342 DFG TQFGSGWAWLV + +L V KT NA NP+ +PLLT+DVWEHAYYLD+QNRRPDYI+ F+ KLV+W+ V+ L +A Sbjct: 105 DFGSFDAFVEAFKQAGATQFGSGWAWLVLD------------------NGTLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVAANLAAA 199
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.923e-20 Identity = 49/93 (52.69%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 55 TQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 333 TQFGSGWAWLV + +L V KTPNA NPLV PLLT+DVWEHAYYLDFQN RP +I F+D LV+W+ V++ L Sbjct: 123 TQFGSGWAWLV------------------DDGGTLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLDNLVNWDFVAQNL 197
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20 Identity = 51/115 (44.35%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 4 DFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 348 DFG TQFGSGWAWLV + +L + KT NA P+ +PLLTIDVWEHAYYLD+QNRRPDYIS F++KL +W+ S +A A Sbjct: 105 DFGSFENFVTEFKQAAATQFGSGWAWLVLD------------------NGTLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANYAAAIA 201
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.663e-19 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 58 QFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 333 QFGSGWAWLV + D +L + KT N VNPL + + LL DVWEH+YY+DF+N+RP Y++ F+DKLV+WE+V+ R+ Sbjct: 126 QFGSGWAWLV-----------------KDSDGALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWENVASRM 200
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.395e-17 Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 333 +DFG QFGSGWAWL+Y D L ++KT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 115 KDFGSFEEFCEQFKQEAVGQFGSGWAWLIYH------------------DNRLQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.822e-17 Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 1 Query: 1 RDFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 333 +DFG QFGSGWAWLVY D L ++KT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 115 KDFGSFEGFCEQFKQEAVGQFGSGWAWLVYH------------------DNRLQIIKTANAGTPIANGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of DY259854 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.380e-17 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 1 Query: 4 DFGXXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 333 DFG QFGSGWAWLVY + L +VKT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++WE V L Sbjct: 116 DFGSFEEFCEQFKAEATGQFGSGWAWLVYH------------------NNRLQIVKTANAGTPIANGMQPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWEFVENNL 207 The following BLAST results are available for this feature:
BLAST of DY259854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259854 ID=DY259854; Name=DY259854; organism=Citrus clementina; type=EST; length=574bpback to top |