DY259861

Overview
NameDY259861
Unique NameDY259861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 2.708e-73
Identity = 130/202 (64.36%), Postives = 153/202 (75.74%), Query Frame = 2
Query:   53 LQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGI 658
            + VPR+KLG+QGLEVS  G GCM +S  Y  P  E + I +I HA   G+TF DT+D YGP+TNE+LLGKAL+   RE +++ATKFG V        + G P YVR+ CE S +RL V+ IDLYYQHR+D  VPIE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQLEWSLW+RD E +I+P CRELGIGI
Sbjct:    6 VSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFG-VSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGI 206          

HSP 2 Score: 34.6538 bits (78), Expect = 2.708e-73
Identity = 19/41 (46.34%), Postives = 24/41 (58.54%), Query Frame = 3
Query:  660 VPYCPLGREFF-GGKAVVESVAFDSFLKFFLRFTGKNRDKN 779
            V Y PLGR FF  G  +V+S++   F K   RF  +N DKN
Sbjct:  207 VAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQPENLDKN 247          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.208e-72
Identity = 139/206 (67.48%), Postives = 159/206 (77.18%), Query Frame = 2
Query:   56 QVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVI-----VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGI 658
            +VPR+KLG+QGLEVS  G GCM +S  Y  P  E D I +I HA + GIT  DT+D YGP+TNEILLGKALK   RE + +ATKFG V LG          V G P YVR+ CEASL+RLD++ IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQLEWSLW+RD+E EI+P CRELGIGI
Sbjct:    7 KVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIV-LGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGI 211          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.043e-36
Identity = 87/207 (42.03%), Postives = 127/207 (61.35%), Query Frame = 2
Query:   53 LQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPR-ENIQVATKFGFVELGFTSVI-VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE---IVPLCRELGIGI 658
            + +P  K+G     V  +GFGCM L   Y  P SEE   +++ HA   G TF+D++D YG   NE  +G+  K+  R + I +ATKFG+ +   T  + +   P+Y+    + SL+RL ++ IDLYY HR     PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I I
Sbjct:    1 MSIPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITI 204          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.875e-27
Identity = 73/210 (34.76%), Postives = 113/210 (53.81%), Query Frame = 2
Query:   65 RVKLGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFV---------ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGI 652
            ++ LGT  + +S++G G  ++ GG  +N  L  +  I  I  A   GI   DTA  Y    +E+++G+ALK+LPRE + V TK G V         ++G   +    +PE +R    ASL+RL ++YID+Y  H         PI ET+  + +L  EGKI+ IG +    D IR       +  +Q ++S+  R +ENE++PLCR+ GI
Sbjct:    3 KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGI 212          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26
Identity = 73/199 (36.68%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLSGGYNSP-LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664
            LG   L+V ++GFG  ++ G    P L++E G  +++ A   G+ F DTA  YG   +E L+G+ ++E   R  + +ATK    E+   S+ +  + E++RS  E SL+RL  +YIDLYY H  D   P+ E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI   P
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVD-GSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIP 204          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.447e-25
Identity = 77/215 (35.81%), Postives = 119/215 (55.35%), Query Frame = 2
Query:   26 AASMAEDKKLQVPRVKLGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664
            AAS A D   Q   VK+G   + V+++GFG M ++G   ++ P  +E  I+ +K      I F DTAD YGP  +E LL +AL   P + + +ATK G V  G       G P+++R     S+RRL V+ IDL+  HR+D  VP ++   E+  + +EG I+++GLSE + D I+ A    P+ +VQ  ++L  R  E +++  C + GI   P
Sbjct:    5 AASSAVDAS-QAGTVKVGD--MVVNRMGFGAMRVTGDGIWDEPKDKEACIATLKRLPELNINFIDTADSYGPEVSENLLREAL--YPYKGLIIATKGGLVRTGPNEWHPCGAPKFLRQEVLMSMRRLGVKQIDLWQLHRIDPKVPRKDQFSEIAAMKKEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRKNE-KVLEYCEQKGIAFIP 213          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.447e-25
Identity = 73/198 (36.87%), Postives = 116/198 (58.59%), Query Frame = 2
Query:   86 GLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYG---PYTNEILLGKALKELPRE--NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGI 658
            G +V  +GFG M L+        +E+   ++ +A S+G  ++D  + YG   P +N  LL +  ++ P     + ++ K G   L F +++  G P++V    E  +  L   + +DL+   RVD +VPIE T+  +K  V+ GKI  +GLSE S +TI+RAHAV PI AV++E+SL++RDIE N I+ +CR+L I I
Sbjct:    6 GFKVGPIGFGLMGLTWKPKQT-PDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGG---LDFKTLVPDGNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPI 199          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.729e-24
Identity = 63/201 (31.34%), Postives = 110/201 (54.73%), Query Frame = 2
Query:   65 RVKLGTQGLEVSKLGFGCMSLSGGYNSP-LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISP 664
            + KLG   L+V  +G G  ++ G    P L+EE G  +++ A   G+T  DTA  YG   +E L+G+ L+E  RE++ +ATK    + G    +   +P++++   + SL+RL+ +YIDL+Y H  D   P +E +  + ++ + GKI+ IG+S  S + ++ A+    +  +Q E++L  R+ E    P  +E  I   P
Sbjct:    3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIP 202          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23
Identity = 76/218 (34.86%), Postives = 118/218 (54.13%), Query Frame = 2
Query:   74 LGTQGLEVSKLGFGCMSLS----GGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPR-ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGISPILSSWS*IFR 694
            LG   L VS+L  GCM+      G +   L EE    IIK A   GI FFDTA+ Y   ++E ++G+AL++  R E++ VATK  F  +G     +    + +RS  + SLRRL ++Y+D+   HR D + PIEET+  +  +V+ GK +YIG S       A    +++ H      ++Q  ++L  R+ E E++PLC + G+ + P    WS + R
Sbjct:    6 LGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKV-FHRVGDLPEGLSRA-QILRSI-DDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIP----WSPLAR 216          
BLAST of DY259861 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22
Identity = 64/187 (34.22%), Postives = 102/187 (54.55%), Query Frame = 2
Query:   86 GLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRE 643
            G+E S++G G  ++ G       E+  I  I+ A  +GIT  DTA  YG   +E ++GKA+KE   R+ + +ATK   ++     +        +    E SL+RL  +YIDLY  H  D  VPIEET   MK+L + GKI+ IG+S  S + +    AV P+  +Q  ++L+ R++E  ++P  ++
Sbjct:   10 GIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTA-LDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKD 195          
The following BLAST results are available for this feature:
BLAST of DY259861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
IN22_MAIZE2.708e-7364.36IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
A115_TOBAC1.208e-7267.48Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
YAKC_SCHPO9.043e-3642.03Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YDJG_ECOLI5.875e-2734.76Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YCCK_BACSU4.974e-2636.68Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
YH5B_SCHPO1.447e-2535.81Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
PLR1_SCHPO1.447e-2536.87Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
IOLS_BACSU2.729e-2431.34Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YAJO_ECOLI8.779e-2334.86Uncharacterized oxidoreductase yajO OS=Escherichia... [more]
GS69_BACSU4.357e-2234.22General stress protein 69 OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YG23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259861 ID=DY259861; Name=DY259861; organism=Citrus clementina; type=EST; length=923bp
CAAAAACAACCTTACCGAAATTCTAGCTGCAAGTATGGCAGAAGATAAGA
AACTCCAAGTTCCAAGAGTGAAACTTGGAACCCAAGGCCTTGAGGTTTCA
AAGCTGGGGTTTGGATGCATGAGCCTCAGTGGCGGCTATAATTCTCCACT
CTCTGAAGAGGATGGCATCTCAATAATAAAGCATGCTTTCAGTAAAGGAA
TCACTTTCTTTGACACTGCTGATAAATATGGACCATATACTAATGAAATT
CTTCTTGGAAAGGCGTTGAAGGAGTTACCTAGAGAAAACATACAAGTGGC
CACAAAGTTTGGGTTTGTAGAATTGGGATTTACTTCTGTGATCGTGAAGG
GCACCCCTGAGTATGTGCGCTCGTGTTGTGAAGCTAGTTTGAGGCGCCTT
GATGTGGAATATATTGATCTGTACTATCAACATAGAGTGGACACATCAGT
TCCCATAGAGGAAACCATTGGCGAAATGAAAAAGCTGGTGGAAGAGGGTA
AAATAAAGTACATAGGATTATCTGAGGCTAGCCCAGATACAATTAGGAGA
GCACATGCTGTTCATCCCATCACAGCTGTACAACTGGAATGGTCCCTTTG
GGCTCGGGACATTGAGAATGAGATAGTACCACTTTGCAGGGAGCTTGGCA
TTGGAATAAGTCCCATACTGTCCTCTTGGTCGTGAATTTTTCGGTGGTAA
AGCTGTTGTGGAAAGTGTGGCCTTTGATAGCTTTTTGAAATTTTTCCTCC
GGTTCACCGGAAAAAACCGGGACAAAAACAGAATATCTTTTTCCCCAAAA
AAACCTGGCCAAAAAATACAAAGCCCTCCTGTCAATTACCCTCGGAAGGG
TTCCCCCCCGGGGGAGATGCTCACCCTTTCCCGCGAAACCACAAACACAA
CCCGAACAACATATGGCTCCTTC
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