DY259863

Overview
NameDY259863
Unique NameDY259863
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1043
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.583e-37
Identity = 116/298 (38.93%), Postives = 169/298 (56.71%), Query Frame = 3
Query:   36 MALNLLSSLPAVCNFTRLSLPLSSKV----------NGFVPPITRVQYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN------KSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMLASV*SC--LPPGR---RRKQYLS*RYKVHHRISQRMGGQA*Y*QK***ISLYIIETCFGTSTNWKKPKFEARWFIHVYKSGPNMNPHL 866
            MAL LL+SLP + NF+R+  P+SSK           NG+   + R    M A+  S  P    I+RRSA+Y P+IW+ DYI+SL  +Y GE+  RQ+  LKEQV  ML   +KVV  +PL QL+LI+ L RLG+SYHFE+EIKR LD ++N +        ++LYATALKFR+LRQ+GY+   +E F+ F DE+GSFK +   ++ KGML+   +   L  G       +  S ++   +    +    A            ++        +W+ P+ EARWFI++Y+   ++NP L
Sbjct:    1 MALKLLTSLP-MYNFSRV--PVSSKDPILLVTSRTRNGY---LARPVQCMVANKVSTSP---DILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMML---HKVV--NPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVS-QEVFNSFKDERGSFK-ACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNKEKNLA-----------TLVNHSLEFPLHWRMPRLEARWFINIYRHNQDVNPIL 271          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.099e-36
Identity = 88/187 (47.06%), Postives = 114/187 (60.96%), Query Frame = 3
Query:   78 FTRLSLPLSSKVNGFVPPITRVQYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAML-QQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIH-----NKNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMLA 620
            FT  +  +++K +   P    +Q  +A S +S      TI+RRSA+Y P IWSFD+IQSL  KYKGE Y  +  KLKE+V  ML   +N +V      QL+LID L RLG+SYHFE+EI   L         NKN    LYATAL+FR+LR+YGY  P +E F+ F DE G FK S  +D+ KG+LA
Sbjct:   33 FTPKTSNITTKKSRSRPNCNPIQCSLAKSPSSDT---STIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLV------QLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIP-QEIFNDFKDETGKFKASIKNDDIKGVLA 209          

HSP 2 Score: 31.9574 bits (71), Expect = 1.099e-36
Identity = 27/86 (31.40%), Postives = 40/86 (46.51%), Query Frame = 1
Query:  661 SIFRDAIRFTTAYPKEWVAKHDIDKNDDEYLCTLLKHALELPLIGRSQNLRPGGSSMYTKVDQT*TPILLHLAKLH*KMGQPIPQK 918
            +I  +A  FTT Y K +V   D +   ++ +  L++HALE+PL  R+            +  Q     LL  AKL   M Q I Q+
Sbjct:  222 NILEEARVFTTEYLKRYVMMIDQNIILNDNMAILVRHALEMPLHWRTIRAEAKWFIEEYEKTQDKNGTLLEFAKLDFNMLQSIFQE 307          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.768e-29
Identity = 99/307 (32.25%), Postives = 156/307 (50.81%), Query Frame = 3
Query:  144 QYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN-----KSLYATALKFRILRQYGYNTPV-KESFSRFMDEKGSFKLSSHSDECKGML----ASV*SCLPPGRRRKQY-LS*RYKVHHRISQRMGGQA*Y*QK***ISLYIIETCFGTSTNWKKPKFEARWFIHVYKSGPNMNPHLAPPCQIALKNGPANTPKKNPKMLSRGGEKKNALGGKFQFLANNKLGEKFFLWPPG 1031
            +Y       S K  + T+ RRSA+Y P+IW  D++QSL+S Y  E+Y R+ E+L+ +V   ++       ++PL QL+LIDNL RLG+++ FE EI+  L+ I+N N +     ++LYAT+L+FR+LRQ+GY  PV +E F+ F D++G F      D+ KG+L    AS  S        + +  + ++     IS+ M       ++         +       +WK P  EARWFIH+Y+   + N  L    ++      A   ++  ++   G  K   LG K  F  N  +    FLW  G
Sbjct:   34 KYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKD-----VIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGY--PVSQEVFNGFKDDQGGF----ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKNMEEDVFVAEQ--------AKRALELPLHWKVPMLEARWFIHIYERREDKNHLLLELAKMEFNTLQAIYQEELKEI--SGWWKDTGLGEKLSFARNRLVAS--FLWSMG 317          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.863e-28
Identity = 102/291 (35.05%), Postives = 153/291 (52.58%), Query Frame = 3
Query:  201 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEI-----KRTLDRIHNKNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEK-GSFKLSSHSDECKGMLASV*SCLPPGRRRKQYLS*R-------YKVHHRISQRMGGQA*Y*QK***ISLYIIETCFGTSTNWKKPKFEARWFI-HVYKSGPNMNPHLAPPCQIALKNGPANTPKKNPKMLSRGGEKKNALGGKFQFLANNKLGEKFFLWPPG 1031
            RRSA+YGP IWSFD++QSL  +YKGESY  +L KL++ V  ML     +   + L QL+LID + RLG+SY FE+EI     ++  +   N N N  LYATAL+FR+LRQYG+  P +E F+ F + K G FK ++ S++  G L    +    G++ +  L           K +  +S               ISL ++         W+  + EA+WFI  +Y+   +MNP L    ++   N   +T ++  K+LSR   K + LG K  F+ +  +  + FLW  G
Sbjct:   77 RRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRML-----IGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVP-QEIFNNFKNHKTGEFK-ANISNDIMGALGLYEASF-HGKKGESILEEARIFTTKCLKKYKLMSSSNNNNMTL------ISL-LVNHALEMPLQWRITRSEAKWFIEEIYERKQDMNPTLLEFAKLDF-NMLQSTYQEELKVLSRWW-KDSKLGEKLPFVRDRLV--ECFLWQVG 348          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.920e-24
Identity = 92/289 (31.83%), Postives = 140/289 (48.44%), Query Frame = 3
Query:   36 MALNLLSSLPAVCNFTRLSLPLSSKVNGFVPPITRVQYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNT---NKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMLA--SV*SCLPPGR------RRKQYLS*RYKVHH---RISQRMGGQA*Y*QK***ISLYIIETCFGTSTNWKKPKFEARWFIHVYKSGPNMNP 860
            +++N+   L ++ NF R   P  +       P  R++     +++S++      IRRS DY P++W F+YIQSL++ YK + +  +  +L  QV  +L+     V ++ + QL+LID+L  LG+SY F+DEIK+ L  IHN+     N  LY TAL FRILRQ+G+N   ++ F  F  EK S   ++ + + KGML        L  G       RR    S R K       I + +                 I        +W+    EARWF+  Y   P+MNP
Sbjct:    4 ISINIAMPLNSLHNFERK--PSKAWSTSCTAPAARLR-----ASSSLQQEKPHQIRRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLK-----VKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHNEPRYFHNNDLYFTALGFRILRQHGFNVS-EDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLELARRFSTRSLREKFDEGGDEIDEDLSSW--------------IRHSLDLPLHWRVQGLEARWFLDAYARRPDMNP 265          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 3.066e-22
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 3
Query:  162 STTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDN-KVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN-KSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSD 599
            ++ ++   ++ I+R  AD+ P++W   ++         E YA+++E LKEQ   ML     K+ D      L+LID + RLG+SYHFE EI   LD+I+N+N+N   L  +AL+FR+LRQ+G+N    E FS+F DE G FK S  SD
Sbjct:    2 ASAAVANYEEEIVRPVADFSPSLWGDQFLSFSIKNQVAEKYAKEIEALKEQTRNMLLATGMKLADT-----LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCNDLCTSALQFRLLRQHGFNIS-PEIFSKFQDENGKFKESLASD 143          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.920e-22
Identity = 59/144 (40.97%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  129 PITRVQYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNK-----------SLYATALKFRILRQYGYN 527
            P  + Q      T S  P    + RRSA+Y P++W  +Y+ SL + Y  E    ++  LK++VS ML +   +     L QL+LID L RLGVSYHFE EIK+TL  +H KN               LYATAL+FR+LRQ+G++
Sbjct:    2 PKRQAQRRFTRKTDSKTPSQPLVSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGL-----LEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRNRWGDLYATALEFRLLRQHGFS 140          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.747e-20
Identity = 72/233 (30.90%), Postives = 114/233 (48.93%), Query Frame = 3
Query:  201 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDR---IHNKNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMLASV*SCLPPGRRRK----------QYLS*RYKVHHRISQRMGGQA*Y*QK***ISLYIIETCFGTSTNWKKPKFEARWFIHVYKSGPNMNP 860
            RR+  Y PT+W F  IQ  DS+YK E +  +   +  QV+ +LQ+     ++D + +L+LID+L RLG+S HF+ EI   L+     +N+     LY+TAL+F++LRQY ++   +E F  F ++KG+    S  D+ +G+L    +     +  +          ++L  R  V   I+                 L  IE      T+W+     AR FI  YK  P+MNP
Sbjct:   57 RRTGGYQPTLWDFSTIQLFDSEYKEEKHLMRAAGMIAQVNMLLQE-----EVDSIQRLELIDDLRRLGISCHFDREIVEILNSKYYTNNEIDESDLYSTALRFKLLRQYDFSVS-QEVFDCFKNDKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLHLARDFATKFLHKRVLVDKDIN----------------LLSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNP 267          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.392e-20
Identity = 88/279 (31.54%), Postives = 132/279 (47.31%), Query Frame = 3
Query:   75 NFTRLSLPLSSKVNGFVPPITRVQYPMAASTT------SIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKN--------TNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMLASV*SCLPPGRRRKQYLS*RYKVHHRISQRM---GGQA*Y*QK***ISLYIIETCFGTSTNWKKPKFEARWFIHVYKSGPNMNP 860
            N + LS PL+   N    P   +  P  A T       S K  +   IRRS +Y P +W  +YIQSL++ Y  E +  +  +L  QV  +L++      ++P+ QL+LI +L  LG+S  F+DEIK  L  I+N++            LY TAL FR+LRQ+G+N   ++ F+ F +EKG    +S + + KGML    +     R+ +  L    +   +  Q+    GG            L  I        +W+    EARWFI  Y   P+MNP
Sbjct:    7 NVSILSKPLNCLHNLERRPSKALLVPCTAPTARLRASCSSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKE-----KMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNIS-QDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLL-RKGEDTLELAREFATKCLQKKLDEGGNEIDEN-----LLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNP 273          
BLAST of DY259863 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.056e-18
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  114 NGFVPPITRVQYPMAASTTSIKPVDQ--TIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKN-TN---KSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSF 578
            N     + R Q       T   P ++  T+ RRSA+Y P+ W   ++ S+++K+  +   R+ + LKE+V  ML  + K      L QL+ ID+L +LGVSYHFE EI   L   + K+ TN     L+ATAL+FR+ RQ+G+N   ++ F  FM+  G F
Sbjct:   15 NALRKTLRRPQSSTCIIVTETTPCNKSPTVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVRKMLNDEQKTY----LDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRTNIQESDLHATALEFRLFRQHGFNVS-EDVFDVFMENCGKF 170          
The following BLAST results are available for this feature:
BLAST of DY259863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
MYRS_QUEIL2.583e-3738.93Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA1.099e-3647.06(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
RLC1_CITLI5.768e-2932.25(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
TPS1_CANSA2.863e-2835.05(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
SSS_SALOF1.920e-2431.83(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]
5EAS_TOBAC3.066e-2240.54Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
OCIS_ARATH8.920e-2240.97(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
SCS_SALOF3.747e-2030.901,8-cineole synthase, chloroplastic OS=Salvia offi... [more]
BPPS_SALOF6.392e-2031.54(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
MYRS1_ARATH2.056e-1836.65Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259863 ID=DY259863; Name=DY259863; organism=Citrus clementina; type=EST; length=1043bp
CCATATATAGAATCCTTGAAATTATATTCTAAGTCATGGCTCTTAATCTG
CTATCTTCACTACCTGCGGTATGCAATTTCACCAGATTATCATTACCATT
ATCAAGCAAAGTTAATGGCTTTGTTCCTCCTATTACTCGAGTCCAATATC
CCATGGCTGCATCCACTACTTCTATTAAGCCTGTCGATCAAACCATTATT
AGGCGATCTGCCGATTACGGGCCAACCATTTGGAGTTTTGATTATATTCA
ATCACTTGACAGTAAATATAAGGGAGAATCGTATGCCAGACAATTGGAAA
AGCTGAAGGAACAAGTAAGCGCGATGCTACAGCAGGATAATAAAGTGGTG
GATTTGGATCCTTTACATCAACTTGACCTCATCGATAATCTGCACAGACT
TGGAGTATCTTATCACTTTGAGGATGAAATAAAAAGAACTTTGGATAGGA
TACACAACAAGAATACTAATAAAAGTTTATATGCCACAGCACTCAAATTT
AGAATCCTAAGGCAATATGGTTACAATACACCTGTAAAAGAAAGTTTTTC
ACGTTTCATGGATGAGAAGGGGAGCTTTAAGTTATCAAGCCACAGTGACG
AATGCAAAGGAATGTTAGCCTCTGTATGAAGCTGCCTACCTCCTGGTAGA
AGAAGAAAGCAGTATCTTTCGTGACGCTATAAGGTTCACCACCGCATATC
CCAAAGAATGGGTGGCCAAGCATGATATTGACAAAAATGATGATGAATAT
CTTTGTACATTATTGAAACATGCTTTGGAACTTCCACTAATTGGAAGAAG
CCAAAATTTGAGGCCAGGTGGTTCATCCATGTATACAAAAGTGGACCAAA
CATGAACCCCCATCTTGCTCCACCTTGCCAAATTGCACTAAAAAATGGGC
CAGCCAATACCCCAAAAAAGAATCCCAAAATGTTGTCCCGGGGGGGGGAA
AAAAAAAACGCCCTTGGGGGAAAATTTCAATTTTTGGCAAACAACAAATT
AGGGGAAAAATTTTTTCTCTGGCCCCCGGGGGGGAAATTATTC
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