DY259864

Overview
NameDY259864
Unique NameDY259864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length941
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.296e-53
Identity = 115/242 (47.52%), Postives = 156/242 (64.46%), Query Frame = 2
Query:    5 ILFLILASATSLPSEHSIIGHDFNEFVS------EERVFELFQRWKDKHGKAYKHTE--EAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYL-KKIQKPIGKAIGNAKSNLHKTVQ-SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            ILFL + + +S   + SII +D    VS      E  V  +++ W  KHGKA       E +RRF  FK+NL +V E       + +GL +FAD++N+E+R  YL  K++K      G  +++L    +   E P S+DWRK+G V  VKDQG CGSCW+FST GA+EGIN +VTGDLI+LSEQELVDCDT+ + GC+GG MDYAFE++I +GGI  + DYPY GVDGTC+  R+  K V++
Sbjct:   10 ILFLAMVAVSSAV-DMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKK-----GERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTI 245          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.213e-51
Identity = 99/235 (42.13%), Postives = 149/235 (63.40%), Query Frame = 2
Query:    5 ILFLILASAT---SLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            +L  I ASA    +   + SI+G+      + +++ ELF+ W  +H KAYK  EE   RF  F+ NL ++ ++ N    + +GLN+FAD+++EEF+  YL   +    +    + +  ++ +   + P S+DWRK+G V PVKDQG CGSCW+FST  A+EGIN + TG+L SLSEQEL+DCDTT + GC+GG MDYAF+++I+ GG+H E DYPY   +G C   +   + V++
Sbjct:   13 LLVAISASALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDIT--DLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTI 245          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.213e-51
Identity = 115/280 (41.07%), Postives = 165/280 (58.93%), Query Frame = 2
Query:    2 VILFLILASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHV----VGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSLMVIKT*SPP*CSAMRR--RSLPIRPCLVGSAIVFPPLSHGTFT 820
            ++L L LA+A     + SI+ +      SEE    L+  WK +HGK+Y    E ERR+  F++NL Y+ E        V    +GLN+FAD++NEE+R+ YL    KP  +      S+ +    +   P S+DWR +G V  +KDQG CGSCW+FS   A+EGIN +VTGDLISLSEQELVDCDT+ + GC+GG MDYAF+++IN+GGI  E DYPY G D  C+  R+  K V++   +  +P   +++++   + P+   +      F   S G FT
Sbjct:   12 LLLLLSLAAA-----DMSIVSYGER---SEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRE---RKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFT 280          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 7.861e-51
Identity = 102/240 (42.50%), Postives = 153/240 (63.75%), Query Frame = 2
Query:    2 VILFLILASATSLP------SEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEA-PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            ++ F +  SA SL        ++SI+G+   +  S +++ ELF+ W     KAY+  EE   RF  FK+NL+++ E       + +GLN+FAD+S+EEF+++YL      + +     +S      +  EA P S+DWRK+G V  VK+QGSCGSCW+FST  A+EGIN +VTG+L +LSEQEL+DCDTT + GC+GG MDYAFE+++ +GG+  E DYPY   +GTC   + + + V++
Sbjct:    9 ILCFALALSAASLSLSFASSHDYSIVGYSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRR--DEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTI 246          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.482e-49
Identity = 99/226 (43.81%), Postives = 141/226 (62.39%), Query Frame = 2
Query:   20 LASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNN---PGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCE-APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPK 685
            L+S++S+ +  SI+  D  +F ++++V  LFQ WK +HG+ Y + EE  +R   FKNN  Y+ +   N   P  H +GLNKFAD++ +EF + YL+   K + + I  A   + K   SC+  P+S DWRK+G++T VK QG CG  W+FS TGAIE  +A+ TGDL+SLSEQELVDC   S G   G+   +FEWV+ HGGI  + DYPY   +G C   + + K
Sbjct:   14 LSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA-PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDK 238          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.639e-48
Identity = 98/245 (40.00%), Postives = 161/245 (65.71%), Query Frame = 2
Query:    2 VILFLILASAT---SLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTE----EAERRFRNFKNNLEYVV--EKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHK---TVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            ++L+++++ A+   S+ ++H  +  D  ++ ++E V  ++ +W  +HGK   +      + ++RF  FK+NL ++    + N    + +GL KF D++N+E+R++YL    +P  + I  AK+   K    V   E P ++DWR++G V P+KDQG+CGSCW+FSTT A+EGIN +VTG+LISLSEQELVDCD + + GC+GG MDYAF++++ +GG++ E DYPY G  G CN+  +  + VS+
Sbjct:   11 LLLYVVVSLASGDESIINDHLQLPSD-GKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEP-ARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSI 253          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.418e-46
Identity = 95/222 (42.79%), Postives = 130/222 (58.56%), Query Frame = 2
Query:   47 EHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSLMVIKT 712
            + SI+G+  ++  S ER+ +LF  W   H K Y++ +E   RF  FK+NL Y+ E       + +GLN+FAD+SN+EF E Y+  +   I   I  +         +   P ++DWRK+G VTPV+ QGSCGSCW+FS    +EGIN + TG L+ LSEQELVDC+  S GC GGY  YA E+V  + GIH  S YPY    GTC     + K V   ++KT
Sbjct:   27 DFSIVGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSL---IDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTC-----RAKQVGGPIVKT 239          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.779e-45
Identity = 98/228 (42.98%), Postives = 141/228 (61.84%), Query Frame = 2
Query:    2 VILFLILASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHV-VGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVD-GTCNTPR 673
            ++  L+L+S+  + +E  I  +       E  V  ++++W  ++ K Y    E ERRF+ FK+NL++V E  + P     VGL +FAD++NEEFR IYL+K  +   +   + K+  +   +    P  +DWR  G V  VKDQG+CGSCW+FS  GA+EGIN + TG+LISLSEQELVDCD    + GCDGG M+YAFE+++ +GGI  + DYPY   D G CN  +
Sbjct:   15 ILSVLLLSSSLGVATETEIERN-------ETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKME---RTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADK 232          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.418e-45
Identity = 101/234 (43.16%), Postives = 139/234 (59.40%), Query Frame = 2
Query:    8 LFLILASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSN---LHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT-TSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            + L L+ A  L    S   H+  E  SEE ++ L++RW+  H  + +   E ++RF  FK+N  +V         + + LNKFADM+N EFR  Y     K      G  + N   +++ V +   P+S+DWRK+G VT VKDQG CGSCW+FST  A+EGIN + T  L+SLSEQELVDCDT  + GC+GG MDYAFE++   GGI  E++YPY   DGTC+  +     VS+
Sbjct:    5 ILLALSLALVLAITESFDFHE-KELESEESLWGLYERWRSHHTVS-RSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDT--VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSI 234          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.199e-44
Identity = 85/206 (41.26%), Postives = 136/206 (66.02%), Query Frame = 2
Query:  107 LFQRWKDKHGKAYKHTE----EAERRFRNFKNNLEYV-VEKKNNPGG-HVVGLNKFADMSNEEFREIYLKKIQKPIGKAIG--NAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            ++ RW  +HGK+  ++     + + RF  FK+NL ++ +  +NN    + +GL  FA+++N+E+R +YL    +P+ +     N        V   E P ++DWR++G V  +KDQG+CGSCW+FST  A+EGIN +VTG+L+SLSEQELVDCD + + GC+GG MDYAF++++ +GG++ E DYPY G +G CN+  +  + V++
Sbjct:    3 IYLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTI 208          
The following BLAST results are available for this feature:
BLAST of DY259864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
RD21A_ARATH1.296e-5347.52Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
XCP1_ARATH1.213e-5142.13Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
ORYA_ORYSJ1.213e-5141.07Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
XCP2_ARATH7.861e-5142.50Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
P34_SOYBN1.482e-4943.81P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
GCP1_ARATH1.639e-4840.00Germination-specific cysteine protease 1 OS=Arabid... [more]
PAPA3_CARPA3.418e-4642.79Caricain OS=Carica papaya PE=1 SV=2[more]
CPR1_ARATH3.779e-4542.98Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSEP_RICCO8.418e-4543.16Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP4_BRANA3.199e-4441.26Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259864 ID=DY259864; Name=DY259864; organism=Citrus clementina; type=EST; length=941bp
GGTTATTCTTTTCTTGATTTTGGCTTCGGCTACTAGCCTCCCTAGTGAAC
ACTCCATCATTGGTCATGACTTTAATGAGTTTGTTTCAGAGGAGCGGGTA
TTCGAGTTATTTCAACGATGGAAAGATAAGCATGGCAAGGCGTACAAGCA
TACAGAAGAGGCAGAAAGGAGGTTCAGAAATTTTAAGAATAACTTGGAGT
ATGTTGTTGAAAAGAAAAATAATCCTGGTGGGCATGTTGTTGGGTTGAAC
AAGTTTGCTGACATGAGCAATGAGGAGTTTCGAGAAATTTATTTGAAAAA
GATTCAAAAGCCTATTGGCAAAGCGATTGGTAATGCAAAGAGTAACTTGC
ACAAGACGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAA
AGGGGAATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTG
GTCGTTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTG
GAGACCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACA
AGCTGTGGATGTGATGGAGGCTACATGGATTATGCATTTGAATGGGTTAT
TAACCACGGTGGAATCCACCCAGAATCTGATTATCCTTACCCCGGTGTCG
ATGGTACCTGCAATACCCCAAGGAGGAAACCCAAATTTGTATCATTGATG
GTTATAAAGACGTAGAGCCCCCCATAGTGCTCTGCCATGCGCCGCCGTTC
CCTCCCGATTCGCCCTTGCTTGGTTGGCTCCGCCATCGTTTTTCCCCCTT
TATCCCATGGGACCTTCACCCGGGGCCGGTCCCCCCCCCCCCTTTACCTC
GCCCAGCCGGTTTTCTCTCTCCGCCCTGTCCTTCAAAACGGGAGCAAATC
TTTGCATCTGCACACAATCCATGGGGACACACCTCCGGGGA
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