DY259871

Overview
NameDY259871
Unique NameDY259871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1150
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1337 contig Ccv1_Contig1337:1..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJ13_ARATH (Chaperone protein dnaJ 13 OS=Arabidopsis thaliana GN=ATJ13 PE=1 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.893e-76
Identity = 139/204 (68.14%), Postives = 164/204 (80.39%), Query Frame = 3
Query:  138 GPPNRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELGPKLNKVXXXXXXXXXXXXXXXXXXALAHFRPSGTILASFSLPQFLEGDGIMRGMAMSSEVQSQLSKNSILAFGGNLEVNDDSGGGAASVVLRHQLSSVSSIEFIASAGLRALVGIQTTR 749
            GPPNRELYALL+LSPEASDEEIRKAYRQWAQVYHPDK Q+P MKE+ATENFQRICEAYEILSDE KRLIYD+YGMEGL SGLELGP+L+K                    +AHF+P+G+IL + S+P FL GDGIMRGM M+S+VQSQLSK+  +A GGNL  N+ SGGG A+ +LR Q+S VSSIEF+AS GL++L+G+QTTR
Sbjct:   10 GPPNRELYALLNLSPEASDEEIRKAYRQWAQVYHPDKIQSPQMKEVATENFQRICEAYEILSDETKRLIYDLYGMEGLNSGLELGPRLSKADEIKEELERIKRRNEEAKKMAHFQPTGSILFNLSVPHFLVGDGIMRGMVMASQVQSQLSKDDAIAIGGNLAANEKSGGGVATAILRRQISPVSSIEFVASTGLQSLIGVQTTR 213          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DJC11_MOUSE (DnaJ homolog subfamily C member 11 OS=Mus musculus GN=Dnajc11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.404e-16
Identity = 64/225 (28.44%), Postives = 96/225 (42.67%), Query Frame = 3
Query:  147 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL-TSGLELGPKLNKVXXXXXXXXXXXXXXXXXXALAHFRPSGTILASFSLPQFLE----------GDGI----MRGMAMSSEVQSQLSKNSILAFGGNLEVNDDSGGGAASVVLRHQLSSV--SSIEFIASAGLRALVGIQTTR*LI--CF 764
            N + Y+LL++  EAS EE++ AYR+   +YHPDK++ P +K  A   F  + +AYE+LSD   R IYDIYG  GL   G E+  +                            P GTI          +          G G     +  M +S  +++ L+        G+L   + +GGG+ +  LR   S+     +EF A      L G++  R L   CF
Sbjct:   12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSGFPQIEINKMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCF 236          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DJC11_BOVIN (DnaJ homolog subfamily C member 11 OS=Bos taurus GN=DNAJC11 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 8.364e-16
Identity = 64/225 (28.44%), Postives = 97/225 (43.11%), Query Frame = 3
Query:  147 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL-TSGLELGPKLNKVXXXXXXXXXXXXXXXXXXALAHFRPSGTILASFSLPQFLE----------GDGI----MRGMAMSSEVQSQLSKNSILAFGGNLEVNDDSGGGAASVVLRHQLSSV--SSIEFIASAGLRALVGIQTTR*LI--CF 764
            N + Y+LL++  EAS EE++ AYR+   +YHPDK++ P +K  A   F  + +AYE+LSD   R IYDIYG  GL   G E+  +                            P GTI          +          G G     +  M +S  +++ L+ +      G+L   + +GGG+ +  LR   S+     +EF A      L G++  R L   CF
Sbjct:   12 NEDYYSLLNVRREASCEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYEEEYEDVSGSGFPQIEINKMHISQSIEAPLTASDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCF 236          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DJC11_PONAB (DnaJ homolog subfamily C member 11 OS=Pongo abelii GN=DNAJC11 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.178e-15
Identity = 65/230 (28.26%), Postives = 98/230 (42.61%), Query Frame = 3
Query:  147 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL-TSGLELGPKLNKVXXXXXXXXXXXXXXXXXXALAHFRPSGTI-------------------LASFSLPQFLEGDGIMRGMAMSSEVQSQLSKNSILAFGGNLEVNDDSGGGAASVVLRHQLSSV--SSIEFIASAGLRALVGIQTTR*LI--CF 764
            N + Y+LL++  EAS EE++ AYR+   +YHPDK++ P +K  A   F  + +AYE+LSD   R IYDIYG  GL   G E+  +                            P GTI                   ++  S PQ       +  M +S  +++ L+        G+L   + +GGG+ +  LR   S+     +EF A      L G++  R L   CF
Sbjct:   12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQI-----EINKMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCF 236          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DJC11_HUMAN (DnaJ homolog subfamily C member 11 OS=Homo sapiens GN=DNAJC11 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.178e-15
Identity = 65/230 (28.26%), Postives = 98/230 (42.61%), Query Frame = 3
Query:  147 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL-TSGLELGPKLNKVXXXXXXXXXXXXXXXXXXALAHFRPSGTI-------------------LASFSLPQFLEGDGIMRGMAMSSEVQSQLSKNSILAFGGNLEVNDDSGGGAASVVLRHQLSSV--SSIEFIASAGLRALVGIQTTR*LI--CF 764
            N + Y+LL++  EAS EE++ AYR+   +YHPDK++ P +K  A   F  + +AYE+LSD   R IYDIYG  GL   G E+  +                            P GTI                   ++  S PQ       +  M +S  +++ L+        G+L   + +GGG+ +  LR   S+     +EF A      L G++  R L   CF
Sbjct:   12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQI-----EINKMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCF 236          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 1.022e-13
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            ++ Y +L L  +ASD+EI+KAYR+ A  YHPDK ++P     A E F+ I EAYE+LSD+ KR I+D YG +GL  G
Sbjct:    3 KDFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQ----AEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLKGG 75          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.627e-13
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            ++ Y +L +   ASDE+I+KAYR+ A  +HPDK ++P     A E F+ + EAYE+LSD  KR IYD +G EGL  G
Sbjct:    3 KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQ----AEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGG 75          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.627e-13
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            ++ Y +L +   ASDE+I+KAYR+ A  +HPDK ++P     A E F+ + EAYE+LSD  KR IYD +G EGL  G
Sbjct:    3 KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQ----AEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGG 75          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.627e-13
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL 371
            +E Y  L + P+ +++E++KAYR+ A  YHPDK Q P  K+ A   F+ I EAYE+LSD  KR +YD YG EG+
Sbjct:    5 KEYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPG-KDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGM 77          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.655e-13
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            ++ Y +L +   ASDE+I+KAYR+ A  +HPDK ++P     A E F+ + EAYE+LSD  KR IYD +G EGL  G
Sbjct:    3 KDYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQ----AEERFKEVAEAYEVLSDPKKREIYDQFGEEGLKGG 75          
The following BLAST results are available for this feature:
BLAST of DY259871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
DNJ13_ARATH1.893e-7668.14Chaperone protein dnaJ 13 OS=Arabidopsis thaliana ... [more]
DJC11_MOUSE6.404e-1628.44DnaJ homolog subfamily C member 11 OS=Mus musculus... [more]
DJC11_BOVIN8.364e-1628.44DnaJ homolog subfamily C member 11 OS=Bos taurus G... [more]
DJC11_PONAB3.178e-1528.26DnaJ homolog subfamily C member 11 OS=Pongo abelii... [more]
DJC11_HUMAN3.178e-1528.26DnaJ homolog subfamily C member 11 OS=Homo sapiens... [more]
DNAJ1_DROME1.022e-1350.65DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJB4_PONAB6.627e-1348.05DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN6.627e-1348.05DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJA1_DICDI6.627e-1348.65DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB4_BOVIN8.655e-1348.05DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259871 ID=DY259871; Name=DY259871; organism=Citrus clementina; type=EST; length=1150bp
GGAGTAATGCATCTCTCTCTTCTAACATGTTGGATGTCGAAGAACGAACT
GAGTTCACTTTTTCTTTGAGATTCTGAGGACCCAAGAGAGAAAAAAAAAA
AAGAAGAAAAAAGTCAAAGATGAGGGAAGCAAAGGACGGGCCGCCAAACA
GGGAATTGTATGCACTGTTGCATCTTTCGCCGGAAGCCTCCGATGAAGAA
ATCAGAAAAGCTTATCGCCAGTGGGCCCAAGTCTATCACCCTGATAAATA
TCAAGCTCCTCATATGAAGGAAATTGCTACAGAGAACTTTCAGAGGATAT
GTGAAGCGTACGAAATATTATCAGATGAGAATAAGCGGCTGATATATGAT
ATATATGGTATGGAAGGATTGACTTCTGGGTTGGAACTTGGTCCAAAGCT
AAATAAAGTGGAAGAGTTAAAGGAAGAGCTTGAAAGGCTACGGCAGAGGA
AGGAACAAGAGAAGGCTTTAGCACATTTTCGTCCTTCTGGGACGATACTG
GCCAGCTTCTCTTTGCCACAGTTTCTAGAGGGTGATGGCATAATGAGAGG
GATGGCTATGAGTAGTGAAGTTCAGTCTCAACTATCTAAAAACAGTATTC
TTGCTTTTGGTGGAAATTTGGAAGTAAATGATGATTCTGGTGGTGGAGCT
GCTTCAGTTGTGCTTAGGCATCAGTTGTCCTCTGTCTCATCTATAGAATT
TATAGCTTCAGCTGGTTTACGGGCACTGGTTGGAATACAAACCACCCGGT
AGCTCATTTGTTTTGATGTGTCCTTTTGACTATTTGGCCTATAAACTTTG
TTCCCTTTTATTTTCTCATTTTATAGTCCCCCTACCATCACATTCCACCG
GCAAAAATGGCCGTTGGCCATGTCTTTGAAAAATGGCCCCCTTAATCCTT
TCCAAAAACCGGGACCCCGCCAGATCCCCCGAACCAACGAAAGGGGAAAA
AACCGCCCCTTGGTGGGGTAAAAAGCCTACCATTTCCGGTTGGGGGGGCA
AAAAAAAAAAAGAAAAAAAGGTCTCGCCGGGGGGGGAAGACCTTTAAAAA
TGGGGCCCAAATTTTCTTTTTGGGGGCCATCCCCCCTCCTTTTATATCCC
CCCGGGGTTTTTCCCAAAAAAACCCCCGGGGGGGCCGAAATACAGGGGGG
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