DY259879

Overview
NameDY259879
Unique NameDY259879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10303 contig Ccv1_Contig10303:706..1620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.217e-24
Identity = 59/81 (72.84%), Postives = 59/81 (72.84%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 244
            HKE   FEGPWT NPLIFDNSYFTELLTG KDGLLQLPSDKALL D VFRPLVEK               HLKLSELGFAE
Sbjct:  169 HKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAE 249          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24
Identity = 56/81 (69.14%), Postives = 59/81 (72.84%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 244
            HKE   FEGPWTRNPL FDNSYFTELL+G K+GLLQLPSDKALL DP FRPLVEK               HLKLSELGFA+
Sbjct:  169 HKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFAD 249          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.680e-23
Identity = 55/81 (67.90%), Postives = 58/81 (71.60%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 244
            HKE   FEGPWTRNPL FDNSYFTELL+G K+GLLQLPSDKALL DP F PLVEK               HLKLSELGFA+
Sbjct:  169 HKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFAD 249          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.488e-22
Identity = 54/81 (66.67%), Postives = 58/81 (71.60%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 244
            HKE   FEG WT NPLIFDNSYFTEL++G K+GLLQLPSDKAL+ DP FRPLVEK               HLKLSELGFAE
Sbjct:  170 HKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 53/81 (65.43%), Postives = 58/81 (71.60%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 244
            HK+   FEG WT NPLIFDNSYF ELL+G K+GLLQL SDKALLDDPVFRPLVEK               H+KLSELGFA+
Sbjct:  169 HKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFAD 249          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 244
            HKE   FEG WT NPLIFDNSYF E+L+G K+GLLQLP+DKALLDDP+F P VEK               HLKLSELGFA+
Sbjct:  169 HKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.211e-17
Identity = 48/87 (55.17%), Postives = 52/87 (59.77%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEP*IYPS 262
            HKE   FEGPWT++PL FDNSYF ELL G   GLLQL +DKALLDDP F P V+                H KLSELGF  P   PS
Sbjct:  164 HKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYAKDEDMFFKAYAISHKKLSELGFNPPRRIPS 250          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15
Identity = 43/79 (54.43%), Postives = 49/79 (62.03%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 238
            H E   F+GPWT+ PL FDNSYF ELL G  +GLL+LP+DK LL+DP FR LVE                H KLSELGF
Sbjct:  166 HPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.492e-14
Identity = 42/79 (53.16%), Postives = 48/79 (60.76%), Query Frame = 2
Query:    2 HKETF*FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 238
            H E   FEG WT+ PL FDNSYF ELL G  +GLL+LP+DKALL+DP FR  V+                H KLSELGF
Sbjct:  166 HPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 39/76 (51.32%), Postives = 47/76 (61.84%), Query Frame = 2
Query:   20 FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEP 247
            F+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE                H KLSELGF  P
Sbjct:  173 FDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGFTPP 248          
The following BLAST results are available for this feature:
BLAST of DY259879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APX1_PEA1.217e-2472.84L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ORYSJ7.891e-2469.14L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI6.680e-2367.90L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ1.488e-2266.67L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ARATH7.385e-2265.43L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH3.665e-2162.96L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX5_ARATH3.211e-1755.17L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
APX3_ARATH1.033e-1554.43L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ1.492e-1453.16Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ7.402e-1451.32Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259879 ID=DY259879; Name=DY259879; organism=Citrus clementina; type=EST; length=915bp
CCACAAGGAGACGTTTTGATTTGAGGGACCATGGACCCGCAACCCTCTCA
TTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTTTTAAGGATGGT
CTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCG
CCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATT
ATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAACCCTAA
ATTTACCCGAGTAAATAAATGGTTGGAATGATCGCCAACAACAGTGTGCC
TCTATTTTATGTTTTTTTAATTCTCACACAATTCGAATTTCAAGATGTTG
TCGGTGTAATTCCGTGCCCACGCTTCCTTGCTCTTCTGCATTCTTCTATC
TTCACACTCACCTCCCCCCACCCCCCATCACCCATTAACTGAGTCATTAC
CCCTAGTAATCCACCCCTACACCCCTCTCACACTCAACTGTCCCTAATCG
ATCTGAGCCTGAATCTATCCGTTATTTCCTCCCATCCCATCTCCACCCCT
CCCTCATGATCCCCCTCCTTCCTTCTTCTCTAACTTCCTCTCCCCCCCCC
TCACCTCCCATCAACCTCCTCCTTCTCCACCTCCCCCTCTGCCCTCCTCT
CCACTTCCCCACCCGCGCCGTGTTCGACTCTCCTACAACAAACACACTTC
ACCCACCACCCCAACCCACCGCCCCCTCCATCCCCTTCTCCCTCGACCCC
TCATACACCTCCTAAAACTACATCACATATATACTAATACTCACTCTCCC
CCAGACGTAATCTCAGGCCTACAGATAATGCTTTCACCCCCACCCTCCCC
CCCCACCTCACCCTCGCTGCTACCTCTCCGCTATTTGCTACCCACCTTCT
CCCCCTGACATTCCT
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