DY259881

Overview
NameDY259881
Unique NameDY259881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length891
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT61_ARATH (VAMP-like protein YKT61 OS=Arabidopsis thaliana GN=YKT61 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.097e-71
Identity = 121/146 (82.88%), Postives = 134/146 (91.78%), Query Frame = 1
Query:    1 PDLSDPVVLATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNMNGLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGESWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            P+ SDPV+L+ A DVSHFGYFQRSSV EF++FV RTV  RTPP QRQSVQHEEYKVH+YN NGLCA+GFMDDHYPVRS+FSLLNQVLDEYQK+FGESWR+A+ D+ QPWPYL EALNK+QDPAEADKLLKIQRELDETKIILHKTI
Sbjct:   13 PEASDPVILSNASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQSVQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGESWRSAKEDSNQPWPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTI 158          

HSP 2 Score: 29.6462 bits (65), Expect = 7.097e-71
Identity = 17/37 (45.95%), Postives = 17/37 (45.95%), Query Frame = 2
Query:  431 KLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            K  DSVLARG               A  MFYK AKKT
Sbjct:  156 KTIDSVLARGEKLDSLVEKSSDLSMASQMFYKQAKKT 192          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT62_ARATH (VAMP-like protein YKT62 OS=Arabidopsis thaliana GN=YKT62 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.531e-58
Identity = 105/148 (70.95%), Postives = 127/148 (85.81%), Query Frame = 1
Query:    1 PDLSDPVVLATAMDVSHFGYFQ--RSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNMNGLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGESWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            P+  +PV+LA   D+S FG F   RS+  EFI+F+ARTV +RTPPGQRQSV+HEEYKVH+YN+NGLCA+GFMDDHYPVRS+FSLLNQVLD YQK++G++WR    ++ QPWPYL EA +K++DPAEADKLLKIQRELDETKIILHKTI
Sbjct:   13 PETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQRQSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRF--ENSSQPWPYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTI 158          

HSP 2 Score: 27.7202 bits (60), Expect = 1.531e-58
Identity = 16/37 (43.24%), Postives = 16/37 (43.24%), Query Frame = 2
Query:  431 KLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            K  D VLARG               A  MFYK AKKT
Sbjct:  156 KTIDGVLARGEKLDSLVEKSSELSLASKMFYKQAKKT 192          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_CANGA (Synaptobrevin homolog YKT6 OS=Candida glabrata GN=YKT6 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.444e-29
Identity = 66/141 (46.81%), Postives = 92/141 (65.25%), Query Frame = 1
Query:   25 LATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSY-NMNGLCAMGFMDDHYPVRSSFSLLNQVLDEYQ-KNFGESWRTAQADNMQ-PWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            L    D+S FG+F+R+SV +F+ F A TV  RT  GQRQSV+   Y  H Y    G+C +   D  YPVR +++LLN+VLDEY   +  + W++  A N       L+  ++KYQDPA+AD ++K+Q+ELDETKI+LHKTI
Sbjct:   24 LTEVKDLSQFGFFERNSVGQFMTFFAETVATRTTAGQRQSVEEGNYIGHVYARSEGICGVLITDKDYPVRPAYTLLNKVLDEYLVAHPADQWKSITATNDSLKMAELSTYISKYQDPAQADAIMKVQQELDETKIVLHKTI 164          

HSP 2 Score: 25.409 bits (54), Expect = 2.444e-29
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 2
Query:  431 KLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            K  ++VL RG              A+  MFYK AKKT
Sbjct:  162 KTIENVLQRGEKLDNLVDKSESLTASSKMFYKQAKKT 198          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_SCHPO (Synaptobrevin homolog ykt6 OS=Schizosaccharomyces pombe GN=ykt6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.696e-29
Identity = 66/141 (46.81%), Postives = 94/141 (66.67%), Query Frame = 1
Query:   22 VLATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYN-MNGLCAMGFMDDHYPVRSSFSLLNQVLDEY-QKNFGESWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            +L TA D+S F +FQRSS+ EF+ F  +TV +RT PGQRQ V+   Y  H YN  +GLC +   D  YP+R +++LLN++LDE+  KN    W +        +P L+  L+KYQDP +AD ++++Q+ELDETK +LHKTI
Sbjct:   18 LLCTASDLSSFSFFQRSSIGEFMNFFTKTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWESGAV--TLSFPELDTYLSKYQDPKQADTIMRVQQELDETKDVLHKTI 156          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_ASHGO (Synaptobrevin homolog YKT6 OS=Ashbya gossypii GN=YKT6 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.031e-29
Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = 1
Query:   25 LATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNMN-GLCAMGFMDDHYPVRSSFSLLNQVLDEY-QKNFGESWR-TAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            L +A D+S FG+F+R+ V++F+ F   TV  RT  GQRQS++   Y  H Y+ + GLC +   D  YPVR +++LLN+VLDEY   +    WR  AQ  +      L   L KYQDP++AD ++++Q+ELDETKI+LHKTI
Sbjct:   19 LCSAKDLSQFGFFERNGVSQFMTFFGETVAGRTGAGQRQSIEEGNYVGHVYSRSEGLCGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPAEWRDIAQTSDQLKLRELEMYLAKYQDPSQADSIMRVQQELDETKIVLHKTI 159          

HSP 2 Score: 26.9498 bits (58), Expect = 7.031e-29
Identity = 15/37 (40.54%), Postives = 17/37 (45.95%), Query Frame = 2
Query:  431 KLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            K  +SVL RG              A+  MFYK AKKT
Sbjct:  157 KTIESVLQRGEKLDNLVDKSESLSASSRMFYKQAKKT 193          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_YEAST (Synaptobrevin homolog YKT6 OS=Saccharomyces cerevisiae GN=YKT6 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.630e-28
Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 1
Query:   25 LATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSY-NMNGLCAMGFMDDHYPVRSSFSLLNQVLDEY-QKNFGESWR-TAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            L+   D+S FG+F+RSSV +F+ F A TV  RT  GQRQS++   Y  H Y    G+C +   D  YPVR +++LLN++LDEY   +  E W    + ++      L+  ++KYQDP++AD ++K+Q+ELDETKI+LHKTI
Sbjct:   19 LSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGQRQSIEEGNYIGHVYARSEGICGVLITDKEYPVRPAYTLLNKILDEYLVAHPKEEWADVTETNDALKMKQLDTYISKYQDPSQADAIMKVQQELDETKIVLHKTI 159          

HSP 2 Score: 23.8682 bits (50), Expect = 2.630e-28
Identity = 13/37 (35.14%), Postives = 17/37 (45.95%), Query Frame = 2
Query:  431 KLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            K  ++VL RG              A+  MFYK AKK+
Sbjct:  157 KTIENVLQRGEKLDNLVDKSESLTASSKMFYKQAKKS 193          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_YARLI (Synaptobrevin homolog YKT6 OS=Yarrowia lipolytica GN=YKT6 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.084e-28
Identity = 66/149 (44.30%), Postives = 99/149 (66.44%), Query Frame = 1
Query:    1 PDLSDPVVLATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSY-NMNGLCAMGFMDDHYPVRSSFSLLNQVLDEY-QKNFGESWRTA-QADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            P+  + V LA+A D+S + +F+RS+V +   F+A TV  RT PGQRQSV+  +Y  H+Y   +GL  +   D  YPVR +++LLN+VL+EY  K+    W  A +A +    P L + + +YQDP +AD ++++Q+ELDETKI+LHKTI
Sbjct:   11 PNKPEAVQLASASDLSSYSWFERSTVGQAFTFLAETVIPRTEPGQRQSVEENDYVGHAYLRSDGLGGVIITDQEYPVRVAYTLLNKVLEEYLTKHPKAEWENAKEASSKLAMPELEDYVKRYQDPHQADAIMRVQQELDETKIVLHKTI 159          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_DEBHA (Synaptobrevin homolog YKT6 OS=Debaryomyces hansenii GN=YKT6 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.171e-27
Identity = 59/141 (41.84%), Postives = 91/141 (64.54%), Query Frame = 1
Query:   25 LATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNMN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGES-WRTAQADNMQ-PWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            L +A D+S F +F+R+ V++F+ F + TV +RT  GQRQS++   Y  H+Y  + GL  +   D  YPVR +++L+N++L+EY     +  W    A N    +  L   + KYQDP++AD ++K+Q+ELDETKI+LHKTI
Sbjct:   19 LTSARDLSQFSFFERNGVSQFMTFFSETVSQRTQAGQRQSIEEGNYIGHTYTRSEGLACVIITDKEYPVRPAYTLINKILEEYLSLHPQKDWANISATNASFNYDNLEHYIKKYQDPSQADSIMKVQQELDETKIVLHKTI 159          

HSP 2 Score: 25.7942 bits (55), Expect = 2.171e-27
Identity = 14/37 (37.84%), Postives = 17/37 (45.95%), Query Frame = 2
Query:  431 KLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            K  +SVL RG              ++  MFYK AKKT
Sbjct:  157 KTIESVLQRGEKLDSLVDKSEALSSSSRMFYKQAKKT 193          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_KLULA (Synaptobrevin homolog YKT6 OS=Kluyveromyces lactis GN=YKT6 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.171e-27
Identity = 62/141 (43.97%), Postives = 91/141 (64.54%), Query Frame = 1
Query:   25 LATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSY-NMNGLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWR-TAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            L++  D+S FG+F+R+SV +F+ F + TV  RT  GQRQSV+   Y  H Y    G+C +   D  YPVR +++LLN+VLDEY        W+   ++D+      L+  + KYQDP++AD ++++Q+ELDETKI LHKTI
Sbjct:   19 LSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTI 159          

HSP 2 Score: 27.7202 bits (60), Expect = 2.171e-27
Identity = 15/42 (35.71%), Postives = 20/42 (47.62%), Query Frame = 2
Query:  416 RLSFIKLSDSVLARGXXXXXXXXXXXXXXAAPHMFYKHAKKT 541
            +++  K  ++VL RG              AA  MFYK AKKT
Sbjct:  152 KITLHKTIENVLQRGEKLDNLVDKSESLSAASRMFYKQAKKT 193          
BLAST of DY259881 vs. ExPASy Swiss-Prot
Match: YKT6_BOVIN (Synaptobrevin homolog YKT6 OS=Bos taurus GN=YKT6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.808e-25
Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = 1
Query:   10 SDPVVLATAMDVSHFGYFQRSSVNEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNMN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTI 438
            S  V+L  A DVS F +FQRSSV EF+ F ++ + +R+  G R SV+ +EY  H Y  N  L  +   D  YP R +F+LL +VLDE+ K      W T   D ++ +  L+  L++YQ+P EAD + K+Q ELDETKIILH T+
Sbjct:   14 SKTVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVKEQEYLCHVYVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPTGSPDTIR-YSGLDSQLSRYQNPREADPMTKVQAELDETKIILHNTM 157          
The following BLAST results are available for this feature:
BLAST of DY259881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
YKT61_ARATH7.097e-7182.88VAMP-like protein YKT61 OS=Arabidopsis thaliana GN... [more]
YKT62_ARATH1.531e-5870.95VAMP-like protein YKT62 OS=Arabidopsis thaliana GN... [more]
YKT6_CANGA2.444e-2946.81Synaptobrevin homolog YKT6 OS=Candida glabrata GN=... [more]
YKT6_SCHPO2.696e-2946.81Synaptobrevin homolog ykt6 OS=Schizosaccharomyces ... [more]
YKT6_ASHGO7.031e-2946.10Synaptobrevin homolog YKT6 OS=Ashbya gossypii GN=Y... [more]
YKT6_YEAST2.630e-2844.68Synaptobrevin homolog YKT6 OS=Saccharomyces cerevi... [more]
YKT6_YARLI5.084e-2844.30Synaptobrevin homolog YKT6 OS=Yarrowia lipolytica ... [more]
YKT6_DEBHA2.171e-2741.84Synaptobrevin homolog YKT6 OS=Debaryomyces hanseni... [more]
YKT6_KLULA2.171e-2743.97Synaptobrevin homolog YKT6 OS=Kluyveromyces lactis... [more]
YKT6_BOVIN1.808e-2544.14Synaptobrevin homolog YKT6 OS=Bos taurus GN=YKT6 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259881 ID=DY259881; Name=DY259881; organism=Citrus clementina; type=EST; length=891bp
CCGGACCTATCGGATCCGGTTGTGTTAGCGACCGCCATGGACGTTAGCCA
TTTCGGTTACTTTCAACGATCCAGCGTTAATGAGTTCATCCTCTTCGTCG
CTCGCACTGTCGGTAAACGGACTCCGCCCGGCCAGCGCCAGTCCGTCCAA
CACGAAGAGTACAAGGTGCATTCTTATAACATGAATGGACTTTGCGCAAT
GGGATTCATGGATGATCATTATCCAGTGCGAAGCTCATTCTCTCTTCTCA
ACCAGGTGCTAGATGAGTATCAGAAAAATTTTGGTGAATCATGGAGGACT
GCACAGGCAGACAACATGCAACCGTGGCCTTATCTAAATGAAGCTTTGAA
CAAATATCAGGACCCAGCGGAGGCTGATAAGCTGTTGAAAATTCAGAGGG
AATTGGATGAAACAAAGATTATCCTTCATAAAACTATCCGATAGTGTACT
TGCACGGGGTGAAAAGCTGGACAGTTTACTTGAGAAGAGTTCAGATCTCA
GTGCCGCTCCCCATATGTTCTACAAGCATGCCAAAAAAACTAAACCTATG
TCGCACCCATCCCGCTCAATCCTTTCGGTGCCTCCATCTCTCCTGTAATG
ACATTCATTTGATTTAAAGTTGAAGCCCTTGGACAACATCAGGGTATCCT
TTCCATGTGTCGCACCCACTCACACCCCCTGGCAGGGATATTTGTTGTTT
ATCACAACACATGATATCGCATACCACGAATAGCCATCTATACGGACTAC
CTACCAGCAATTTCCTCCCCCCCATCCATCCCCTAACCTCAACCCGTCTC
TTTTCTCTCACTTTTAGTATCTGCATCTGTCCTCCCCACCTCACTTCCAT
TAACTCAATTATAGACAGCACTCCTCGACCGCACCCATATC
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