DY259925

Overview
NameDY259925
Unique NameDY259925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1070
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1358 contig Ccv1_Contig1358:1..1070. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 8.855e-65
Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNPGF 463
            YTAA  VWSVGCIFMELMNR+PLFPG DH+HQMRLL ELLGTPT++DLGF  NEDAKRYIRQLP  PRQ LA++F HV+P+AIDLVDRMLTFDP +RITV++AL H YLA+LHD  DEP+C +PFSF+FEQQ L EEQIK+MIYQEA+ LNP +
Sbjct:  216 YTAAIDVWSVGCIFMELMNRKPLFPGKDHVHQMRLLTELLGTPTESDLGFTHNEDAKRYIRQLPNFPRQPLAKLFSHVNPMAIDLVDRMLTFDPNRRITVEQALNHQYLAKLHDPNDEPICQKPFSFEFEQQPLDEEQIKEMIYQEAIALNPTY 369          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.372e-62
Identity = 112/154 (72.73%), Postives = 132/154 (85.71%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNPGF 463
            YTAA  VWSVGCIFMELM+R+PLFPG DH+HQ+RLL+EL+GTP +ADL FV NE+A+RYIRQLP+H RQS  + FPHVHPLAIDLV++MLTFDP +RITV+ ALAHPYLA LHD +DEPVC  PFSFDFEQ +L EEQ+KD+IYQE L  NP +
Sbjct:  245 YTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPNEADLDFV-NENARRYIRQLPRHARQSFPEKFPHVHPLAIDLVEKMLTFDPRQRITVEGALAHPYLASLHDISDEPVCSSPFSFDFEQHALSEEQMKDLIYQEGLAFNPDY 397          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 5.028e-60
Identity = 101/152 (66.45%), Postives = 133/152 (87.50%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNP 457
            Y+AA  VWSVGCIFMEL+NR+PLFPG DH+HQMRL+ E++GTPTD +LGF+RNEDA++Y+R LPQ+PR++ A +FP V P A+DL++RMLTF+P++RITV+EAL HPYL RLHD ADEP+C EPFSFDFEQ++L E+Q+K +I+ EA+ +NP
Sbjct:  214 YSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMFPRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHDIADEPICLEPFSFDFEQKALNEDQMKQLIFNEAIEMNP 365          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 5.028e-60
Identity = 101/152 (66.45%), Postives = 133/152 (87.50%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNP 457
            Y+AA  VWSVGCIFMEL+NR+PLFPG DH+HQMRL+ E++GTPTD +LGF+RNEDA++Y+R LPQ+PR++ A +FP V P A+DL++RMLTF+P++RITV+EAL HPYL RLHD ADEP+C EPFSFDFEQ++L E+Q+K +I+ EA+ +NP
Sbjct:  214 YSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMFPRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHDIADEPICLEPFSFDFEQKALNEDQMKQLIFNEAIEMNP 365          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 8.577e-60
Identity = 109/154 (70.78%), Postives = 132/154 (85.71%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNPGF 463
            YTAA  VWSVGCIFMELM+R+PLFPG DH+HQ+RLL+EL+GTP++ DLGF+ NE+AKRYIRQLP + RQS  + FPHVHP AIDLV++MLTFDP KRITV++ALAHPYL  LHD +DEPVC  PFSFDFEQ +L EEQ+K++IY+EAL  NP +
Sbjct:  233 YTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEDDLGFL-NENAKRYIRQLPPYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEY 385          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 8.577e-60
Identity = 109/154 (70.78%), Postives = 132/154 (85.71%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNPGF 463
            YTAA  VWSVGCIFMELM+R+PLFPG DH+HQ+RLL+EL+GTP++ADLGF+ NE+AKRYIRQLP + RQS  + FPHVHP AIDLV++MLTFDP +RITV+ ALAHPYL  LHD +DEPVC  PFSFDFEQ +L EEQ+K++IY+EAL  NP +
Sbjct:  240 YTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFL-NENAKRYIRQLPLYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRQRITVENALAHPYLTSLHDISDEPVCTTPFSFDFEQHALTEEQMKELIYREALAFNPEY 392          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.984e-57
Identity = 103/154 (66.88%), Postives = 131/154 (85.06%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNPGF 463
            YTAA  VWSVGCIFMELM+R+PLFPG DH+HQ+RLL+EL+GTP++A++ F+ NE+AKRYIRQLP + RQS  + FPHV+P AIDLV++MLTFDP +RITV++ALAHPYL  LHD +DEPVC  PF+FDFEQ +L EEQ+K++IY+E L  NP +
Sbjct:  238 YTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEAEMEFL-NENAKRYIRQLPLYRRQSFVEKFPHVNPAAIDLVEKMLTFDPRRRITVEDALAHPYLTSLHDISDEPVCMTPFNFDFEQHALTEEQMKELIYREGLAFNPEY 390          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.977e-56
Identity = 103/154 (66.88%), Postives = 129/154 (83.77%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNPGF 463
            YTAA  VWSVGCIFMELM+R+PLFPG DH+HQ+RLL+EL+GTP++ +L F+ NE+AKRYIRQLP +PRQS+   FP VHPLAIDL+++MLTFDP +RITV +ALAHPYL  LHD +DEP C  PF+FDFE  +L EEQ+K++IY+EAL  NP +
Sbjct:  241 YTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEEELEFL-NENAKRYIRQLPPYPRQSITDKFPTVHPLAIDLIEKMLTFDPRRRITVLDALAHPYLNSLHDISDEPECTIPFNFDFENHALSEEQMKELIYREALAFNPEY 393          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.915e-51
Identity = 93/152 (61.18%), Postives = 120/152 (78.95%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNP 457
            YTAA  +WSVGCI  E++ R PLFPG D++HQ+RL+ EL+G+P D+ LGF+R+++A+RY+R LPQ+P+Q     FP +   A+DL++RML FDP KRITVDEAL HPYLA LH+  DEPVCP PFSFDFEQ SL EE IK++I++EAL  NP
Sbjct:  239 YTAAIDIWSVGCILGEIVTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRSLPQYPKQQFRARFPTMSSGAMDLLERMLVFDPSKRITVDEALCHPYLASLHEIYDEPVCPAPFSFDFEQPSLTEEDIKEIIWREALKFNP 390          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 3.267e-51
Identity = 91/152 (59.87%), Postives = 121/152 (79.61%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNP 457
            YTAA  +WSVGCI  E M R PLFPG D++HQ+RL+ EL+G+P D+ LGF+R+++A+RY+RQLPQ+PRQ+ A  FP++   A+DL+++ML FDP +RITVDEAL HPYLA LHD  +EPVC  PF+FDFEQ +L EE IK++IY+E +  NP
Sbjct:  221 YTAAIDIWSVGCILGETMTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYPRQNFAARFPNMSAGAVDLLEKMLVFDPSRRITVDEALCHPYLAPLHDINEEPVCVRPFNFDFEQPTLTEENIKELIYRETVKFNP 372          
The following BLAST results are available for this feature:
BLAST of DY259925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
MPK3_ARATH8.855e-6575.32Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK1_ORYSJ5.372e-6272.73Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MPK5_ORYSJ5.028e-6066.45Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI5.028e-6066.45Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MMK1_MEDSA8.577e-6070.78Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MAPK_PEA8.577e-6070.78Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
NTF4_TOBAC3.984e-5766.88Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MPK6_ARATH1.977e-5666.88Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MPK2_ORYSJ1.915e-5161.18Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
MPK4_ARATH3.267e-5159.87Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259925 ID=DY259925; Name=DY259925; organism=Citrus clementina; type=EST; length=1070bp
CTACACTGCTGCCCCTTATGTGTGGTCTGTTGGCTGTATATTTATGGAGC
TTATGAACAGAAGGCCTCTGTTCCCAGGAAACGATCACTTGCATCAGATG
CGCTTATTGATAGAGCTTCTTGGAACACCAACAGATGCTGATCTGGGGTT
TGTCCGTAATGAGGATGCAAAAAGATATATACGACAACTTCCCCAACATC
CTCGTCAGTCGTTAGCCCAAGTTTTTCCACATGTTCATCCACTGGCTATT
GATCTTGTAGACAGAATGCTTACATTTGATCCCATGAAGAGAATTACTGT
TGACGAAGCACTAGCCCATCCTTATCTTGCAAGATTACATGATGAAGCCG
ATGAACCGGTCTGCCCAGAGCCATTTTCTTTTGATTTTGAGCAACAAAGC
CTGGGAGAAGAGCAAATAAAGGACATGATTTATCAGGAGGCATTACCACT
CAATCCAGGATTTGCTTAATAAAATAAACAGCACTGGTGCTCCGTTTTAA
TATTCACTATTTGTTTGTAATTCCATTAATTCAAGTGTTGCTCGGATGAA
AAGATGACTTTGAAGCCTTGAACCACTGCAGTTTGGCCGACAAATGTTAT
TTTTTCCCCTGCTGTACTATCACTCCTGCTGAAAATAATTAAATTCTCGA
ATTCTAATTTTTTTTGTTCCCCCTACCCTATTTCCACACAAAAAAACAAA
AATAATAACCCCACCTCTCCTTGCACCACTTTCGGCCTACACAGAAACCC
TTTGTTAATTATTTTTGTTTGCACCAATACAGTGACATACTTCCCCCAAC
TCCTCATCTTTCACTTGGCCACCTTCCTATATCCCCCCCTTCATGTATTG
ATAATTAATCTGTCTCCTCTGCTTTCGCCGTGCGCCCTACATCTCCCGCT
TTCCCCACACTCTCCCGACCACTACACACCTCTCATTCTACCTCACTCTC
TCTTTTCTCTCCATACCGATAATCCATTCCATCACCTATTCCAACTTCTC
CACCAACTCTCTTCCTCATCCGGCCATCTCACTTACTCGCCTTGACCTAT
GTTATATTTCCTATATCCTT
back to top