DY259926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.401e-62 Identity = 138/251 (54.98%), Postives = 167/251 (66.53%), Query Frame = 2 Query: 116 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNXXXXXXXXXDSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLXXXXXXXXXXXXXMCFHTPADISSSSLHFLGVFSNNPRDDHLTGKKGGMPGNLYLYDHAKNNSRAG 868 MTDEQ ETLRKQIA+Y TICE+LVEMHK+L+A QDLA GGR+G +Y DP+M+S G HK++ARQRWTPTPVQLQILE IFDQGTGTPSKQKIK+IT ELSQHGQI+E NVYNWFQNRRARSKRKQ H +SEVETEV++L +E + +PE+L + + +CF +P SS LH L V S NPRD+HL GK G+ + LYDH ++ +G Sbjct: 38 MTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLA--GGRMGGLYADPMMSSLG-HKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQ---------HGGGSSGNNNGESEVETEVEAL---NEKRVVRPESLLGLPDGNSNNNGLG-TTTATTTAPRPEDLCFQSPE--ISSDLHLLDVLS-NPRDEHLVGKM-GLAESYNLYDHVEDYGMSG 268
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.276e-55 Identity = 126/236 (53.39%), Postives = 152/236 (64.41%), Query Frame = 2 Query: 116 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNXXXXXXXXXDSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLXXXXXXXXXXXXXMCFHTPADISSSSLHFLGVFS------NNPRDDHLTGK 805 MTDEQ+E LRKQI++YATICEQLVEMH++L+A QD + AG RLGN+YCDPLM GG HKI+ARQRWTPTP+QLQILE+IFDQG GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRARSKRKQ + N +SE E + +S + K+ +P + + A + + + M + D SS S LG S +NPR DH GK Sbjct: 30 MTDEQMEVLRKQISIYATICEQLVEMHRALTAQQD-SIAGMRLGNLYCDPLMVPGG-HKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAALPNNNA------------ESEAEADEES-PTDKKPKSDRPLHQNIAMRDHNSERISEMHHFDTEHEQIRRMM--YASNDSSSRSSGSLGQMSFYDNVMSNPRIDHFLGK 248
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.049e-41 Identity = 81/132 (61.36%), Postives = 105/132 (79.55%), Query Frame = 2 Query: 116 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 511 MT+EQ+E LRKQIAVYA IC+QLV +H SLS++ L++ + Y DP+ S H+IS R RWTPT QLQILESI+D+G+GTP++++I+EI ELS+HGQI+ETNVYNWFQNRRARSKRKQ +++AN Sbjct: 31 MTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTAN 162
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana GN=WOX10 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.418e-38 Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 2 Query: 116 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 490 MTDEQ+ETLRKQIA+YA +C+QLV +H SLS+ L++ + Y DP++ S H +S R RWTPT QLQILE+I+ +G+GTP+ ++IKEIT+ELS+HGQI E NVY+WFQNRRARSKRKQ Sbjct: 15 MTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQ 139
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX7_ORYSJ (WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 5.997e-13 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 200 SLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 487 SL + +AGG ++ P + G + RW P P Q++ILE+IF+ G P + +I I ++L ++GQ+ + NV+ WFQNR++RSK K Sbjct: 33 SLLSGSSAGSAGGGGYSLKSSPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSKNK 128
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.023e-12 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 233 GGRLGNI------YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 490 GGR G PL + A RWTPT Q+ +LE ++ QG TP+ ++I++IT L +HG I NV+ WFQN +AR ++KQ Sbjct: 13 GGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.023e-12 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 233 GGRLGNI------YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 490 GGR G PL + A RWTPT Q+ +LE ++ QG TP+ ++I++IT L +HG I NV+ WFQN +AR ++KQ Sbjct: 13 GGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX8_ARATH (WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.336e-12 Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = 2 Query: 302 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 487 + RW P P Q++ILESIF+ GT P +++I+ I + L ++GQI + NV+ WFQNR++R+K K Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAKHK 114
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.887e-12 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 293 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 490 + RW PTP QL++LE ++ QGT TPS I++IT +L ++G+I NV+ WFQN +AR ++K+ Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136
BLAST of DY259926 vs. ExPASy Swiss-Prot
Match: WOX9_ARATH (WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.631e-12 Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 302 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 487 + RW P P Q++ILE+IF+ G P +++I+ I +L ++GQ+ + NV+ WFQNR++RSK K Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114 The following BLAST results are available for this feature:
BLAST of DY259926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259926 ID=DY259926; Name=DY259926; organism=Citrus clementina; type=EST; length=1067bpback to top |