DY259934

Overview
NameDY259934
Unique NameDY259934
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length896
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DEGP9_ARATH (Protease Do-like 9 OS=Arabidopsis thaliana GN=DEGP9 PE=2 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 8.539e-100
Identity = 179/219 (81.74%), Postives = 202/219 (92.24%), Query Frame = 3
Query:    6 VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGDPQT*E 662
            VLKPSDIILSFDG++IANDGTVPFRHGERIGFSYL+SQKYTGDSA+VKVLRN E+ EFNIKL+ HKRLIPAHI+G+PPSY+I+AGFVFT V+ PYLRSEYGK+YEFDAPVKLL+K LHAMAQSVDEQ+VVVSQVLV+DINIGYEEIVNTQV+A NGKPV+NLK LA MVE+ EDE++KF+L+Y QIVVL TKTAKEAT DIL THCIPSAMS D +T E
Sbjct:  372 VLKPSDIILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLRNKEILEFNIKLAIHKRLIPAHISGKPPSYFIVAGFVFTTVSVPYLRSEYGKEYEFDAPVKLLEKHLHAMAQSVDEQLVVVSQVLVSDINIGYEEIVNTQVVAFNGKPVKNLKGLAGMVENCEDEYMKFNLDYDQIVVLDTKTAKEATLDILTTHCIPSAMSDDLKTEE 590          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DGP10_ARATH (Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana GN=DEGP10 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.883e-47
Identity = 103/226 (45.58%), Postives = 148/226 (65.49%), Query Frame = 3
Query:    6 VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQ-QIVVLKTKTAKEATSDILATHCIPSAMSGDPQT*ENIEEKV 680
            +LK  D++L+FDG+ IANDGTVPFR+ ERI F +LVS K   ++A+VKVLR  + HEF+I L   + L+P H   + PSYYI AGFVF  +T PYL  EYG+D+   +P  L  + L  + +   +Q+V+VSQVL+ DIN GYE +   QV  +NG  V NL+ L  ++E+   E L+ DL+ + +++VL  ++AK ATS IL  H I SA+S D    +N+E ++
Sbjct:  356 ILKKDDVLLAFDGVPIANDGTVPFRNRERITFDHLVSMKKPDETALVKVLREGKEHEFSITLRPLQPLVPVHQFDQLPSYYIFAGFVFVPLTQPYLH-EYGEDWYNTSPRTLCHRALKDLPKKAGQQLVIVSQVLMDDINTGYERLAELQVNKVNGVEVNNLRHLCQLIENCNTEKLRIDLDDESRVIVLNYQSAKIATSLILKRHRIASAISSDLLIEQNLETEL 580          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DEGP2_ARATH (Protease Do-like 2, chloroplastic OS=Arabidopsis thaliana GN=DEGP2 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 4.032e-41
Identity = 88/214 (41.12%), Postives = 133/214 (62.15%), Query Frame = 3
Query:    6 VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGD 647
            VLK  D+I+SFD + +  +GTVPFR  ERI F YL+SQK+ GD A + ++R  E  +  + L     L+P HI+G  PSY I+AG VFT ++ P +  E     E    +KLL K  +++A+   EQIV++SQVL  ++NIGYE++ N QVL  NG P++N+  LA +++  +D++L F+ E   + VL+ + +  A+  IL  + IPS  S D
Sbjct:  361 VLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEE----CEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSAD 570          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DEGP3_ARATH (Putative protease Do-like 3, mitochondrial OS=Arabidopsis thaliana GN=DEGP3 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.364e-35
Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 3
Query:    6 VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGDPQ 653
            VLK  DIIL+ DG+ I ND +V FR  ERI F +LVS K   ++A++KVLR  + +EFN  L +   L+P     +  SYYI  G VF  +T PY+ S             + +  L  M +   EQ+V++SQ+L  DIN GY    + QV  +NG  V NLK L  +VE    E ++ DLE  +++ L  K+AK+ TS IL +  IPSA+S D Q
Sbjct:  338 VLKKDDIILAIDGVPIGNDSSVHFRKKERITFKHLVSMKKPCETALLKVLREGKEYEFNSSLKSVPPLVPKRQYDKSASYYIFGGLVFLPLTKPYIDSSC-----------VSESALGKMPKKAGEQVVIISQILEDDINTGYSIFEDFQVKKVNGVQVHNLKHLYKLVEECCTETVRMDLEKDKVITLDYKSAKKVTSKILKSLKIPSAVSEDLQ 542          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DEGP4_ARATH (Protease Do-like 4, mitochondrial OS=Arabidopsis thaliana GN=DEGP4 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.641e-34
Identity = 87/215 (40.47%), Postives = 123/215 (57.21%), Query Frame = 3
Query:    9 LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGDPQ 653
            L+  DIIL+ D + I ND  V FR+ ERI F++ VS K   ++ +++VLR+ + HEF+I +     L+P H   + PSYYI AGFVF  +T PY+ S             + +  +  M +   EQ+     VL  DIN GY +  N +V+ +NG  V+NLK L ++VE+   E L+ DLE +++VVL    AKEATS IL  H IPSA   D Q
Sbjct:  317 LRKDDIILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDGKEHEFHIMVKPVPPLVPGHQYDKLPSYYIFAGFVFVPLTQPYIDS-----------TLICNCAIKYMPEKAGEQL-----VLADDINAGYTDFKNLKVIKVNGVQVENLKHLTELVETCWTEDLRLDLENEKVVVLNYANAKEATSLILELHRIPSANEYDYQ 515          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DGP11_ARATH (Putative protease Do-like 11, mitochondrial OS=Arabidopsis thaliana GN=DEGP11 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.182e-30
Identity = 82/219 (37.44%), Postives = 115/219 (52.51%), Query Frame = 3
Query:    6 VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNT-----QVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGD 647
            +L+  DIIL+ DG+ I ND  VPF++  RI FSYLVS K  G+ A+VKVLRN + +E+NI L   K           PSYYI  GFVF  +T  YL SE+ +                          V +S+ L  DIN GY+ +        QV  +NG  V+NLK L +++E    E L+ + +  +++VL  ++AK+AT  IL  H I S +S D
Sbjct:  342 ILRKDDIILAIDGVPIGNDEKVPFQNKRRIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKPNFTVQQFYNVPSYYIFGGFVFVPLTKTYLDSEHHQ--------------------------VKISERLADDINEGYQSLYGAQLWWEQVEKVNGVEVKNLKHLCELIEECSTEDLRLEFKNHKVLVLNYESAKKATLQILERHKIKSVISKD 534          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DGP13_ARATH (Putative protease Do-like 13 OS=Arabidopsis thaliana GN=DEGP13 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.711e-29
Identity = 80/218 (36.70%), Postives = 118/218 (54.13%), Query Frame = 3
Query:    3 HVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGDPQT 656
            ++LK  D+ILS DG+ I NDGTV   + ER     LVS K  G++ ++K+LR  ++HEFNI L   +RL+PA      PSYYI AGFVF  +   + +   G                        EQIVV+S+VL   IN+ Y    + +V ++N   V+NLK L +++E    + L+ +L   ++++L  + AK +TS IL  H +P AMS D  T
Sbjct:  281 NILKKYDVILSIDGVAIENDGTVIIPNRERTRLDDLVSLKQLGETILLKILREGKMHEFNITLRPVQRLVPAGQIDNNPSYYIFAGFVFVPLRKQHFKGSNG------------------------EQIVVISEVLADVINVEYYMYKHLKVNSVNKVKVENLKHLCELIEKCCTKDLRLELGDGRVIILDYQFAKSSTSLILERHRVPWAMSKDLMT 474          
BLAST of DY259934 vs. ExPASy Swiss-Prot
Match: DGP12_ARATH (Putative protease Do-like 12, mitochondrial OS=Arabidopsis thaliana GN=DEGP12 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.537e-27
Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 3
Query:    6 VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKTKTAKEATSDILATHCIPSAMSGD 647
            +L+  DIIL+ DG+ + ++         RI F++ +S K   ++ +VKVLR  + HE+NI L   K  I        PSYYI  GFVF  +T  Y+  +Y K                      DEQ V++SQV+  DIN GY    + QV  +NG  V+NLK L +++E    + L+ DLE  +++VL  ++AK+AT +IL  H I SA + +
Sbjct:  313 ILRKDDIILAIDGVPVLSEM-------RRISFNHFISMKKPDENILVKVLRKGKEHEYNISLKPVKPHIQVQQYYNLPSYYIFGGFVFVPLTKSYIDDKYYK--------------------ITDEQHVIISQVMPDDINKGYSNFKDLQVEKVNGVKVKNLKHLRELIEGCFSKDLRLDLENDKVMVLNYESAKKATFEILERHNIKSAWASE 499          
The following BLAST results are available for this feature:
BLAST of DY259934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
DEGP9_ARATH8.539e-10081.74Protease Do-like 9 OS=Arabidopsis thaliana GN=DEGP... [more]
DGP10_ARATH2.883e-4745.58Protease Do-like 10, mitochondrial OS=Arabidopsis ... [more]
DEGP2_ARATH4.032e-4141.12Protease Do-like 2, chloroplastic OS=Arabidopsis t... [more]
DEGP3_ARATH7.364e-3540.74Putative protease Do-like 3, mitochondrial OS=Arab... [more]
DEGP4_ARATH1.641e-3440.47Protease Do-like 4, mitochondrial OS=Arabidopsis t... [more]
DGP11_ARATH4.182e-3037.44Putative protease Do-like 11, mitochondrial OS=Ara... [more]
DGP13_ARATH2.711e-2936.70Putative protease Do-like 13 OS=Arabidopsis thalia... [more]
DGP12_ARATH2.537e-2735.05Putative protease Do-like 12, mitochondrial OS=Ara... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YL01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259934 ID=DY259934; Name=DY259934; organism=Citrus clementina; type=EST; length=896bp
CTCATGTTCTGAAGCCATCTGATATTATCCTTAGCTTTGATGGAATTGAT
ATTGCTAATGATGGAACAGTTCCATTCAGGCATGGGGAGCGTATAGGTTT
TAGTTATCTTGTTTCTCAGAAGTACACTGGAGATAGTGCTGTTGTAAAAG
TCCTCCGGAATTCAGAGGTTCATGAGTTCAACATAAAACTTTCAACTCAC
AAACGGCTAATCCCTGCACACATCAATGGCCGACCTCCTTCTTATTACAT
CATTGCAGGGTTTGTCTTTACAGCTGTGACTGCTCCATATCTGCGTTCTG
AGTATGGAAAGGATTATGAATTTGATGCTCCGGTCAAACTGTTGGACAAG
CTTTTGCACGCAATGGCACAATCAGTAGATGAACAAATTGTTGTTGTTTC
TCAGGTCCTTGTGGCTGACATTAATATTGGATACGAGGAGATTGTCAATA
CGCAGGTTCTTGCTCTCAATGGTAAGCCTGTGCAGAATCTGAAGAGCCTG
GCTGACATGGTGGAAAGCAGTGAAGATGAATTTCTAAAGTTTGATCTAGA
GTACCAACAGATAGTGGTCCTAAAAACTAAGACTGCCAAGGAAGCCACTT
CTGATATCCTTGCAACACATTGTATACCTTCCGCTATGTCCGGTGATCCC
CAAACTTGAGAGAATATTGAAGAGAAAGTTATTGCCTTAGGCCGACAACT
CTCCCGAACTTGGAGAGCCTGGGTACACTGCTGCAAGTTGCGCTTACGAA
TTCTCGACGGTCCACCTCAAAAACACAAAAGGTGTTCCCCCCCCCTTTGC
TCGGACCCACGCAAAATTTCCCCTACTCCACCTCTCGACACATATTAAAA
ATCAAATCCACTTATTCCCCACAGCACTCACTCCACAACTCCCGCT
back to top