DY259935

Overview
NameDY259935
Unique NameDY259935
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1022
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: EP1G_DAUCA (Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.421e-73
Identity = 123/174 (70.69%), Postives = 143/174 (82.18%), Query Frame = 2
Query:   68 VPANETFKFVNEGEFGPYINEYDANYRMISIFNSPFQVGFYNTTPNAYTLALRLGVQRSEPNYRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTANKGVVGFKLLPNGNMVLHDSKGNFIWQSFDYPTDTLLVGQSLRVGGVTKLVSRLSIKENVDGPYSFAME 589
            VPANETFKFVNEGE G YI+EY  +YR +  F SPFQ+ FYN TP A+TLALR+G++R+E   RWVWEANRG PV ENAT + G DGNLVLA ++G V WQ++TANKGVVG K+LPNGNMVL+DSKG F+WQSFD PTDTLLVGQSL++G VTKLVSR S  ENV+GPYS  ME
Sbjct:   26 VPANETFKFVNEGELGQYISEYFGDYRPLDPFTSPFQLCFYNQTPTAFTLALRMGLRRTESLMRWVWEANRGNPVDENATLTFGPDGNLVLARSNGQVAWQTSTANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQSLKMGAVTKLVSRASPGENVNGPYSLVME 199          

HSP 2 Score: 39.6614 bits (91), Expect = 3.421e-73
Identity = 32/103 (31.07%), Postives = 46/103 (44.66%), Query Frame = 3
Query:  585 WSLINSP----LYYKSSNAPRPVVYFIFP-----GQFSGLKNGTFNAAPETDEA*-----LNN*I*ILIPGRSPFGKAKINANISFPRLE*KENPKTLPYSDK 851
            +SL+  P    LYYK + +P+P+ Y+ F       +   L+N TF    E D+       L       + G S   + K N  +SF RLE   N K   Y+DK
Sbjct:  194 YSLVMEPKGLHLYYKPTTSPKPIRYYSFSLFTKLNKNESLQNVTFEFENENDQGFAFLLSLKYGTSNSLGGASILNRIKYNTTLSFLRLEIDGNVKIYTYNDK 296          
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  173 FQVGFYNTTPNAYTLALRLGVQRSEPNYR-WVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFAMESNKFP 604
            F++GF+ TT ++      LG+   +  YR +VW ANR  P+  +      +  NLVL +     VW +N      +  V  +LL NGN V+ DS  N    F+WQSFDYPTDTLL    +G  L+ G    L S  S  +   G YS+ +E  + P
Sbjct:   56 FELGFFKTTSSSRWY---LGIWYKKFPYRTYVWVANRDNPLSNDIGTLKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLP 208          
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.839e-15
Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  173 FQVGFYNTTPNAYTLALRLGVQRSEP--NYRWVWEANRGKPVR-ENATFSLGTDGNLVLAEADGTVVWQSNTAN-KGVVGFKLLPNGNMVLHDSKGNFIWQSFDYPTDTLLVGQSLRVGGVTKLV 535
            F  GFY    +A+T ++      +    N   VW AN  +PV    +  +L  DGN+VL + DG  VW+++  N  GV   +LL  GN+V+ DS GN +WQSFD PTDT L  Q   +   T+LV
Sbjct:   55 FSSGFYEVYTHAFTFSVWYSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQ--LITAATRLV 177          
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.081e-14
Identity = 59/159 (37.11%), Postives = 82/159 (51.57%), Query Frame = 2
Query:  167 SPFQVGFYNTTPNAYTLALRLGVQRSEPNYR-WVWEANRGKPVRENATFSLGTDGN-LVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFAMESNKFP 604
            S F+VGF+ T    Y     LG+   + + R +VW ANR  P+  NA  +L   GN LVL +     VW +N      +  V  +LL NGN V+ DS  N    ++WQSFDYPTDTLL    +G +L+ G    L S  S  +   G +S+ +E+   P
Sbjct:   55 SIFEVGFFRTNSRWY-----LGMWYKKVSDRTYVWVANRDNPL-SNAIGTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLP 207          
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.135e-12
Identity = 59/172 (34.30%), Postives = 88/172 (51.16%), Query Frame = 2
Query:  137 ANYRMISIFNSPFQVGFYNTTPNAYTLALRLGVQR-SEPNYRWVWEANRGKPVRENATFSLGT----DGNLVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFAMESNKFP 604
            +N R +    +  ++GF+ T P++    L +  ++ SE  Y  VW ANR  P+    + S+GT    + NLVL +     +W +N      +  V  +LL NGN VL DS  N    F+WQSFDYPTDTLL    +G  LR G    L S  S  +   G +S+ +++ + P
Sbjct:   43 SNSRTLVSPGNVLELGFFRT-PSSSRWYLGMWYKKLSERTY--VWVANRDNPL----SCSIGTLKISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLP 207          
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.756e-12
Identity = 59/169 (34.91%), Postives = 85/169 (50.30%), Query Frame = 2
Query:  137 ANYRMISIFNSPFQVGFYNTTPNAYTLALRLGVQRSEPNYR-WVWEANRGKPVRENATFSLGTDGN-LVLAEADGTVVWQSNTANKGV---VGFKLLPNGNMVLHDSKGN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFAMESNKFP 604
            +N  ++S  N+ F++GF+ T  ++      LG+   +   R +VW ANR  P+  NA  +L   GN LVL       VW +N         V  +LL NGN V+ DS  N    ++WQSFDYPTDTLL    +G  L+ G    L S  S  +   G +S+ +E+   P
Sbjct:   45 SNRTLVSPGNN-FELGFFRTNSSSRWY---LGIWYKKLLDRTYVWVANRDNPL-SNAIGTLKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLP 208          
BLAST of DY259935 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.867e-11
Identity = 55/159 (34.59%), Postives = 77/159 (48.43%), Query Frame = 2
Query:  173 FQVGFYNTTPNAY---TLALRLGV--QRSEPNYRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTANKG--VVGFKLLPNGNMVLHDSK----GNFIWQSFDYPTDTLL----VGQSLRVGGVTK-LVSRLSIKENVDGPYSFAMESNKF 601
            F++GF+ TT       T    LG+  + +  +  +VW ANR   +  +      +  +LVL +   T VW +N        V  +LL NGN VL DSK      F+WQSFDYP DTLL    +G++    G  K L S  S  +   G YSF +E+  F
Sbjct:   53 FELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETEGF 211          
The following BLAST results are available for this feature:
BLAST of DY259935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
EP1G_DAUCA3.421e-7370.69Epidermis-specific secreted glycoprotein EP1 OS=Da... [more]
SLSG3_BRAOL4.596e-1535.90S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
KPRO_MAIZE7.839e-1539.20Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
SRK6_BRAOE5.081e-1437.11Putative serine/threonine-protein kinase receptor ... [more]
SLSG2_BRAOA2.135e-1234.30S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG6_BRAOL4.756e-1234.91S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG1_BRAOA6.867e-1134.59S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YL02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259935 ID=DY259935; Name=DY259935; organism=Citrus clementina; type=EST; length=1022bp
ATCTTCTTCAGCAATATTCTCCCTCTTGTTCTACTTCTCACTCATTTTCT
CCATTTCTAGTGCCCAAGTTCCTGCCAACGAAACATTTAAGTTTGTGAAT
GAAGGAGAATTTGGTCCATACATTAATGAATACGATGCAAATTACAGAAT
GATAAGTATCTTCAACTCTCCATTCCAGGTTGGCTTTTACAACACAACAC
CAAATGCTTACACCCTTGCTCTCCGCTTGGGCGTGCAGCGAAGCGAACCA
AATTACCGCTGGGTCTGGGAAGCAAACCGGGGCAAACCGGTTCGCGAAAA
CGCCACCTTTTCTTTGGGAACCGACGGAAACCTTGTCTTGGCTGAGGCGG
ACGGCACTGTCGTCTGGCAATCCAACACAGCCAACAAAGGTGTTGTAGGG
TTCAAGTTGCTTCCAAATGGCAACATGGTGCTTCATGACTCAAAGGGCAA
CTTTATCTGGCAGAGTTTTGATTACCCGACTGATACTCTCTTGGTGGGCC
AGTCACTTCGCGTCGGTGGGGTCACCAAGCTCGTAAGCAGACTTTCCATT
AAAGAAAACGTCGACGGCCCTTACAGCTTTGCAATGGAGTCTAATAAATT
CCCCACTTTATTATAAAAGCAGCAATGCTCCCCGGCCTGTTGTTTACTTC
ATTTTCCCTGGCCAATTTAGTGGCTTAAAGAATGGTACGTTCAATGCCGC
CCCCGAAACTGATGAAGCTTAACTTAACAACTGAATCTAAATTCTCATCC
CGGGGCGGTCCCCTTTCGGCAAGGCCAAAATAAACGCCAACATATCCTTC
CCCCGGTTAGAATAAAAGGAAAACCCCAAAACCCTCCCTTACTCCGACAA
GGGGTGAATCCCAACCAACAAAAATCCCTTTCCCCCCTCTTCAAAAAAAA
AATCCATTTTTAAAAACCGAATCCCCCCCCGCCCAAAAAAACGCCCCCAA
TTTTGGTGGCCGTGGCACCCAAACCTATTGCCTTTCCCTTCCCCAAACCA
AACGGGTCCTTCCTTCGCGCCC
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