DY259937

Overview
NameDY259937
Unique NameDY259937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1073
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15174 contig Ccv1_Contig15174:23..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_ARATH (Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana GN=PCM PE=2 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 3.163e-62
Identity = 113/180 (62.78%), Postives = 144/180 (80.00%), Query Frame = 2
Query:  179 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            M+++WS S +NKNKAMVE+LQ++G++TS +V++ ME +DR  FV D +  YVDSPM+IGYN TISAPHMHA CLQLLE++LKPGM  LD+GSGTGYLTACFA+MVG +GRA+GVEH+PELVASS++NIE SAA+P LK+GS ++HVGDG++G     P        A P+ P ALID LK
Sbjct:    1 MKQFWSPSSINKNKAMVENLQNHGIVTSDEVAKAMEAVDRGVFVTDRSSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAASPFLKEGSLAVHVGDGRQGWAEFAPYDAIHVGAAAPEIPEALIDQLK 180          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_WHEAT (Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum GN=PCM PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 2.050e-61
Identity = 115/198 (58.08%), Postives = 148/198 (74.75%), Query Frame = 2
Query:  179 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLKTRKPNGDS--PLAKYSPE 766
            M ++W+   + KN A+VE+L+ YGV+ + KV+EVMETIDRA FVP+G  PY DSPM IGYNATISAPHMHATCL+LL++ L+PGMHALD+GSG+GYLTACFA+MVGP+GRAVG+EH+PELV +S +N+E+SAAA L+K GS S HV DG+ G P+  P        A P+ P  L++ L   KP G    P+  YS +
Sbjct:    1 MAQFWAEGSLEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTPYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAAALMKDGSLSFHVSDGRLGWPDAAPYDAIHVGAAAPEIPRPLLEQL---KPGGRMVIPVGTYSQD 195          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_CHICK (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 8.117e-34
Identity = 81/176 (46.02%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I S KV EVM   DR  +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACF+ MVGP+G+ VG++H+ ELV  SI N++K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKSDKVFEVMLATDRCHYAKYN--PYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDPT-LLSSGRVKLIVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PIG (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus scrofa GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 3.085e-33
Identity = 80/176 (45.45%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++H+ ELV  SI N+ K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPM-LLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_BOVIN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos taurus GN=PCMT1 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 4.029e-33
Identity = 80/176 (45.45%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++H+ ELV  SI N+ K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPM-LLSSGRVQLVVGDGRMGYAAEAPYDAIHVGAAAPVVPQALIDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_DANRE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio rerio GN=pcmt PE=2 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 1.531e-32
Identity = 78/176 (44.32%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + +  +V +L+  G+I S +V EVM   DR+ F      PY+DSP +IGY ATISAPHMHA  L+LL ++L  G  ALD+GSG+G L+ CF+ MVGP G+ +G++H+ ELV  SI N++K   + L+  G   L VGDG+ G     P        A P  P AL+D LK
Sbjct:    3 WKSGGAS-HAELVNNLRKNGIIKSDRVYEVMLATDRSHF--SRCNPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPS-LITSGRIKLIVGDGRMGFTEEAPYDAIHVGAAAPTVPQALLDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_RAT (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus GN=Pcmt1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.999e-32
Identity = 79/176 (44.89%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++H+ ELV  SI N++K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPM-LLSSGRVRLVVGDGRMGFAEEAPYDAIHVGAAAPVVPQALIDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_MOUSE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.999e-32
Identity = 79/176 (44.89%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++H+ ELV  SI N++K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDPM-LLSSGRVRLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PONAB (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo abelii GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 4.454e-32
Identity = 79/176 (44.89%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++H+ ELV  SI N+ K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLK 174          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_MACFA (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca fascicularis GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 4.454e-32
Identity = 79/176 (44.89%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++H+ ELV  SI N+ K     LL  G   L VGDG+ G     P        A P  P ALID LK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAECN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLK 174          
The following BLAST results are available for this feature:
BLAST of DY259937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PIMT_ARATH3.163e-6262.78Protein-L-isoaspartate O-methyltransferase OS=Arab... [more]
PIMT_WHEAT2.050e-6158.08Protein-L-isoaspartate O-methyltransferase OS=Trit... [more]
PIMT_CHICK8.117e-3446.02Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_PIG3.085e-3345.45Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_BOVIN4.029e-3345.45Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DANRE1.531e-3244.32Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_RAT1.999e-3244.89Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_MOUSE1.999e-3244.89Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_PONAB4.454e-3244.89Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_MACFA4.454e-3244.89Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259937 ID=DY259937; Name=DY259937; organism=Citrus clementina; type=EST; length=1073bp
TTATTATATGCCTGGTTTAAAGCACATATTATCAACCTTCACTCTTATCC
CTCACCGTCATCGCTGTTCTTACTTACCATCACCGTCACCGTCACTTGTC
TCTTTGTCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTT
CCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGCGATACTGGAGTGGAA
GTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATTATGGA
GTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGATCGGGC
TTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAA
TAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACATGCCTT
CAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGATATTGG
TTCTGGAACTGGATATTTGACAGCATGCTTTGCCTTGATGGTTGGACCAC
AAGGTCGTGCTGTGGGTGTCGAGCACCTTCCTGAGTTGGTGGCTTCCTCA
ATCCAGAATATTGAAAAAAGTGCAGCGGCTCCTTTGCTGAAAAAAGGTTC
TCCCTCATTGCATGTTGGTGATGGAAAAAAAGGTGGGCCCAATTTGCCCC
CCATGAAGCAATACATTGGCCGAACCGCACCCCCCCAAAATCCCCCGGCC
CTTATTGACCCCCTTAAAACCCGGAAGCCAAATGGTGACTCCCCGTTGGC
AAAATACTCCCCGGAATCGAATGGGGTTAACAAAAACCCCAAAGGGCCCC
CCTAACCCTCGGGAGGAAACCCCCCGTCCTTTACCTCCCCCCCTACCCAC
TCCGGGAGCACCCTCTGGGGGGCGCGGGGGAGGGCTATAATTCCCTTTCC
CCCCTAAACAAGGTGCGCGACCCCTTTAGCCATCAAACACAACGCTTGCC
AATGGGGCAAACAAAAACCACCCCACCCATCCACCCTACACATGGGGGCG
GTTTATTCTTCCCCCTCATATAATTTCCCGATCGGAGTCGGGTGTCGCAC
ACCCCCCCACCCCTCCCCCCCCC
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