DY259940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 1.171e-44 Identity = 104/257 (40.47%), Postives = 137/257 (53.31%), Query Frame = 1 Query: 208 QNENEYGNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVKEREELIERPXXXXXXXXXXXXXXXXXXXX----------------------------KECPYYMRSGSCQYGANCRFNHPDPTAVGGSDSPSGYG-NGGSVSSQAPAQASIGSWSSPMALN--EPAPFVPMMYSPTPGVPSHNYEWNGVSS----PPLSHHKGACSPPPRMSKTKTPGWRMAR*FLHPQRLVEGLPERP 873 Q E E G++ R YPVRPD++DC+FYM+TG+CK+GS+CKFNHPVRRK Q +E+V+ER+E +E P KECP+YMR+GSC++G++C+FNHPDPTA+GG DSP G NGGS S +AP+QAS SWSS +N APF+P M+ + GV +WNG + PP S S +T + + H Q VE PERP Sbjct: 83 QKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQ---YQH-QMSVEEFPERP 335
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.870e-42 Identity = 108/279 (38.71%), Postives = 142/279 (50.90%), Query Frame = 1 Query: 253 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKE-KVKEREE------LIERPXXXXXXXXXXXXXXXXXXXXKE----------------------CPYYMRSGSCQYGANCRFNHPDPTAVGGSDSPSGYGNG----GSVSSQAPAQASIGSWSSPMALNEPAPFVPMMYSPTPGVPSHNYEWNGVSSPPLSHHKGACSPPPR--MSKTKTPGWRMAR*FLHPQRLVEGLPERPGPGRMAGTS*ERETGSSNSNWQIP-SFPKNRNPHISP 981 YPVRP A+DC+FYM+TG+CKFGS+CKFNHP+ RK Q +++ KV+E+E+ LI+ + CPYYMR+GSC+YGA C+FNHPDPT +GG+DSPS GN G+ S +A QAS SWSSP +N +PF+P+M S T GV S N EWNG + S +G SP M+ + + + H Q E PERP S +TG + PKNR P + P Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRH-QMPAEEFPERPD---QPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPP 381
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.343e-18 Identity = 65/220 (29.55%), Postives = 89/220 (40.45%), Query Frame = 1 Query: 274 QDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVKEREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHPDPTAVGGSDSPSGYGNGGSVSSQ---APAQASIGSWSSPMALNE-PAPFVPMMYSPTPGV--PSHNY---EWNGVSSPPLS----------HHKGACSPPPRMSKTKTPGWRMAR*FLHPQRLVEGLPERPG 876 ++C +Y G CKFG CK+ H ++ ++ EKV KECPYYMR+GSC+Y NC+F+HPDP+ V D + NG + + +Q + W +NE PF+ S + G+ P Y EWNG PL+ H A P + PG H Q E PERPG Sbjct: 241 EECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVD-----------------LNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPG--------HQQVPSEEYPERPG 435
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.006e-16 Identity = 49/158 (31.01%), Postives = 72/158 (45.57%), Query Frame = 1 Query: 253 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVKEREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHPDPTAVGGSDSPSGYGNGGSVSSQAPAQASIGSWSSPMALNEP-APFVPMMYSPTPGVPSHNYE 723 YP RP DC +Y+KT CK+GS CKFNHP + + V+ ++ L ERP C +YM++G C++G +C+F+HP + S G +S+G S P A N P F P +Y + G+P + E Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHP----REEAAVSVETQDSLPERPSEPM------------------CTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIG--------------SSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGE 343 HSP 2 Score: 83.5741 bits (205), Expect = 2.544e-15 Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 253 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVKEREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHPDPTAV 552 YP RP +C +YMKTG CKFG CKF+HP R + +K+ ++ + CPYYM++G+C+YGA C+F+HP P V Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLS------------LAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEV 504
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.745e-16 Identity = 68/231 (29.44%), Postives = 102/231 (44.16%), Query Frame = 1 Query: 190 IVQNEIQNENEYGNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVK-EREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHP-DPTAVGGSDSPS--GYGNGGSVSSQA----PAQASIGS-------WSSPMALNEPAPFV-PMMYSP-TPGVPSHN---YEWNGVSSPPLSHHKGACSPPPRM---SKTKTPGW 813 I Q + N ++ + PYP P DC++Y++TG C+FG+ C+FNHP RK + ++K E E + +P EC YY+++G+C++GA CRF+HP D V G + + GY + S +A Q G+ S M L+ V P + SP TPG S+ W+ S P +G S P + PGW Sbjct: 6 IPQEAMWQMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGEFPERLGQP---------------------ECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSSSSYVPSPRWQGPSSYAPLILPQGVVSVPGW 215
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.340e-15 Identity = 53/182 (29.12%), Postives = 83/182 (45.60%), Query Frame = 1 Query: 250 PYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSS--KEKVKER------EELIE---------------RPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHPDP-----TAVGGSDSPSG---YGNGGSVSSQAPAQASIGSWSSPMALNEPAPFVPMMYSPTPG 702 PYP RP +DC FY++TG C +GS+C++NHP + KE++ ER E ++ + K CPYY+R+G+C++G C+F+HP P TA G S P+ Y +G ++ S + G+ P P +VP++ SP+ G Sbjct: 43 PYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMS------TYGTLPRPQV---PQSYVPILVSPSQG 215
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 5.669e-15 Identity = 57/202 (28.22%), Postives = 85/202 (42.08%), Query Frame = 1 Query: 190 IVQNEIQNENEYGNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVK-EREELIERP-------------------------XXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHPDPTAVGGSDSPSGYGNGGSVSSQAPAQASIGSWSSPMALNEPAPFVPMMYSPTPGVPSHN 717 +V E + G M PYP R DC++YM+TG C+FG CKFNHP RK + ++K E + I +P KEC YY+R+G C++G+ C+F+HP P+ + S Y G SV+S P+Q + + L+ A F+ +P P H+ Sbjct: 33 VVDEEAMWQMNLGEAMEAG-PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTS--PSQHTYPGAVTNWPLSRSASFI-----ASPRWPGHS 226
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.649e-14 Identity = 52/191 (27.23%), Postives = 85/191 (44.50%), Query Frame = 1 Query: 181 SNLIVQNEIQNENEYGNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVK-EREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHP-DPTAVGGSDSPSGYG---NGGSVSSQAPAQASIGSWSSPMALNEPAPFVPMMYSPTPGVPSHNYEWNGVS 738 S L+ Q+ + N ++ + YP RP DC++Y++TG C+FGS C+FNHP R+ + +++ E E I +P EC YY+++G+C++G C+F+HP + + G S + G V + + N P P M PT G +Y W+ S Sbjct: 13 SPLMNQDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYPERIGQP---------------------ECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSG--QQSYPWSRAS 180
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 8.185e-14 Identity = 62/261 (23.75%), Postives = 102/261 (39.08%), Query Frame = 1 Query: 250 PYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVK-EREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHP-DPTAVGGSDSPSGYGNGGSVSSQAPA------QASIGSWS--------SPMALNEPAPFVPMMYSPTPGVPSHNYEWNGVSSPPLSHHKGACSPPPRMSK-------------TKTPGWRMAR*FLHPQRLVEGLPERPGPGRMAGTS*ERETGSSNSNWQIP 945 PYP R DCT+Y++TG C+FG +C+FNHP R + ++K E E + +P EC YY+++G+C++G C+F+HP + + G + G S + A Q G+ + MA + +P P ++S P + + P +G+ P PR + P W + P E + PG + GTS + + + N P Sbjct: 76 PYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGEYPERMGQP---------------------ECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFP-----RGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSP 310 HSP 2 Score: 73.559 bits (179), Expect = 2.633e-12 Identity = 42/126 (33.33%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 235 MRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVKEREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHPDPTAVGGSDSPSGYGNGGSVSSQAP 612 +++ +P RPD +C +YMKTG CKFG+ CKF+HP R ++ + + V L RP + C +Y R G C++GANC+F+HP P G GS S+ P Sbjct: 323 LQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHP-RVRSMPTPDCVLSPVGLPLRP------------------GEELCKFYSRYGICKFGANCKFDHPTMA------PPMGVYAYGSASTNVP 423
BLAST of DY259940 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.396e-13 Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 226 GNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQSSKEKVKEREELIERPXXXXXXXXXXXXXXXXXXXXKECPYYMRSGSCQYGANCRFNHP 537 G + +P RP DC++Y+K G+CKFG +C +NHP R + +K K E+ RP +C YY++ GSC++G NCRFNHP Sbjct: 32 GKTKKVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDK-KPAEQFPRRP------------------GEPDCSYYVKFGSCKFGMNCRFNHP 116 The following BLAST results are available for this feature:
BLAST of DY259940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259940 ID=DY259940; Name=DY259940; organism=Citrus clementina; type=EST; length=1182bpback to top |