DY259941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259941 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.436e-68 Identity = 138/217 (63.59%), Postives = 160/217 (73.73%), Query Frame = 1 Query: 340 SGNTRKLDRRYSRIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFRFYSGGRFCYGFEEVLSPYREIVPNLKLAGPTSFAPVFELVMFYLEPSGGPVPCYIYNWLM----GRETERVKTLPGCLNPPGQKNS*MHLKNQASLPCPFVPFGEQKGP 978 S N ++L+R+YS+I+DDY SL+QVTEALARAGLESSNLIVGIDFTKSNEWTG RSFNR+SLH+IG NPYEQAI+IIG+TLA FDEDNLIPCYGFGDASTHDQDVF F S RFC GFEEVLS Y+EIVP LKLAGPTSFAP+ ++ M +E SGG Y+ L+ G+ T V T G L+P QK + + LP V G GP Sbjct: 86 SDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQ-----YHVLVIIADGQVTRSVDTENGQLSPQEQKTV-DAIVQASKLPLSIVLVGVGDGP 296
BLAST of DY259941 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.222e-65 Identity = 134/213 (62.91%), Postives = 157/213 (73.71%), Query Frame = 1 Query: 352 RKLDRRYSRIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFRFYSGGRFCYGFEEVLSPYREIVPNLKLAGPTSFAPVFELVMFYLEPSGGPVPCYIYNWLM----GRETERVKTLPGCLNPPGQKNS*MHLKNQASLPCPFVPFGEQKGP 978 +K DRRYS+I+D+Y SL QV+EAL RAGLESSNLIVGIDFTKSNEWTG +SFNR+SLH++ + NPYEQAI+IIG+TLA FDEDNLIPCYGFGDASTHDQDVF FY GRFC GFEEVL+ YREIVP LKLAGPTSFAP+ E+ M +E S G Y+ L+ G+ T V T G L+P QK +K ++LP V G GP Sbjct: 124 KKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQ-----YHVLVIIADGQVTRSVDTEHGRLSPQEQKTVDAIVK-ASTLPLSIVLVGVGDGP 330
BLAST of DY259941 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 2.844e-30 Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = 1 Query: 391 YKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDG-LNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFRF---YSGGRFCYGFEEVLSPYREIVPNLKLAGPTSFAPVFE 777 +K+LD + +A+ AGLE SNLI GID+TKSN + G+R+F++R LH I +NPY+Q I I+GKTL+ FD D IP YGFGD D +F Y + C GFEEVL Y E+ P ++++GPT+F P+ + Sbjct: 7299 FKTLDDIVKAIKHAGLEYSNLIFGIDYTKSNFYQGERTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVPLID 7431
BLAST of DY259941 vs. ExPASy Swiss-Prot
Match: CPNE1_HUMAN (Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.674e-12 Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 346 NTRKLDRRYSRIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGD-GLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDV-----FRFYSGGRFCYGFEEVLSPYREIVPNLKLAGPTSFAPVFELV 783 N+ + + R+ +Y LD V G N VG+DFT SN G S + SLHY+ G+N Y A+ +G + +D D L P +GFG D V F +C G + ++ YR+ +P ++L GPT+FAP+ V Sbjct: 257 NSGTIRVKICRVETEYSFLDYVM------GGCQINFTVGVDFTGSN---GDPS-SPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHV 398
BLAST of DY259941 vs. ExPASy Swiss-Prot
Match: CPNE1_MOUSE (Copine-1 OS=Mus musculus GN=Cpne1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.561e-12 Identity = 48/142 (33.80%), Postives = 69/142 (48.59%), Query Frame = 1 Query: 376 RIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGD-GLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDV-----FRFYSGGRFCYGFEEVLSPYREIVPNLKLAGPTSFAPVFELV 783 R+ +Y LD V G N VG+DFT SN G S + SLHY+ G+N Y A+ +G + +D D L P +GFG D V F +C G + ++ YR+ +P ++L GPT+FAP+ V Sbjct: 266 RVETEYSFLDYVM------GGCQINFTVGVDFTGSN---GDPS-SPDSLHYLSPTGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHV 397
BLAST of DY259941 vs. ExPASy Swiss-Prot
Match: CPNE3_PONAB (Copine-3 OS=Pongo abelii GN=CPNE3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.043e-11 Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 448 NLIVGIDFTKSNEWTGKRSFNRRSLHYIG-DGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDV-----FRFYSGGRFCYGFEEVLSPYREIVPNLKLAGPTSFAPVFELV 783 N VG+DFT SN+ RS + SLHYI +G+N Y A+ +G + +D D + P +GFG V F +C G + ++ YR +P +KL GPT+F+P+ V Sbjct: 291 NFTVGVDFTGSND--DPRSPD--SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPTNFSPIINHV 404 The following BLAST results are available for this feature:
BLAST of DY259941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259941 ID=DY259941; Name=DY259941; organism=Citrus clementina; type=EST; length=988bpback to top |