DY259953

Overview
NameDY259953
Unique NameDY259953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 8.633e-48
Identity = 99/225 (44.00%), Postives = 140/225 (62.22%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHFQRN 702
            M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS   GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAG+++KL + + LGA     YK EDF     + T G GV++ILDC+G S++++N
Sbjct:    1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKN 225          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 3.085e-29
Identity = 83/219 (37.90%), Postives = 122/219 (55.71%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCL 678
            M+AI + + G PEVL+LQ +V  P  KD +VLIKV+A  +N  DT  R G++   K   PY PG + +G I +VG++VS +K GD+V       GGYAE        V  +P  +  K  AA      T +  +  ++ + PGES LVHG S G+G  A Q+ +  G++V  TA  EE   +  + GA     +K  D++ ++K+  G KGVDVI++ L
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNI-KPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEML 225          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.999e-28
Identity = 82/227 (36.12%), Postives = 119/227 (52.42%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHFQRN 702
            M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A PY PG + +G I SVG  VS +K GD+V C     GGYAE          P+P  +  +  AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAG+EE   +    GA     +K  +++ ++K   G KGVDVI++ L   +   +
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR-KPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKTSAGDKGVDVIIEMLANKNLSND 233          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.817e-28
Identity = 78/227 (34.36%), Postives = 122/227 (53.74%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHFQRN 702
            M+A+ + + G PEVL+LQ ++  P  KD + LIKV A  +N  +T  R G+Y   K   PY PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  AA      T +  +  ++H+  GES LVHG S G+G  A Q+ +  G++V  TAG EE   +    GA     ++  +++ ++K+  G KG+DVI++ L   +  ++
Sbjct:    8 MRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNKD 233          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.887e-27
Identity = 82/229 (35.81%), Postives = 121/229 (52.84%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETG--GKGVDVILDCLGTSHFQRN 702
            M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A PY PG + +G I SVG  VS +K GD+V C     GGYAE        + P+P  ++ +  AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAG+EE   +    GA     +K  +++ ++K   G   KGVDVI++ L   +   +
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR-KPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEMLANENLSND 235          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: VAT1_DANRE (Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.771e-27
Identity = 82/226 (36.28%), Postives = 122/226 (53.98%), Query Frame = 1
Query:   16 ESEGTMKAIVITQPGSPEVLQLQEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTS 687
            E   T +A+V+T  G  + ++LQ  +  P +K  EV+++V+   LN AD + R+G Y         PG+ECSG I +VG+ V+  KVGD+V  L   G + E V V +     +P G+S ++AAA P    T +  +F   HL P +S LVH  + G+G  A Q+ K    V VF TA +  K  V    G    I Y+T D+V  ++ +   KG+D++LD LG S
Sbjct:   66 EDTFTYRALVLTGYGGYDKVKLQVKKGKPALKSGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVLVLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVHMAAGGVGIAATQLCKTVNDVTVFGTA-SASKHEVISQGGVTHPIDYRTRDYVEEVR-KISPKGLDIVLDPLGGS 289          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.433e-26
Identity = 75/227 (33.04%), Postives = 122/227 (53.74%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHFQRN 702
            M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y   K   PY PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  AA      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG EE   +    GA     ++  +++ ++K+  G KG+D+I++ L   +  ++
Sbjct:    8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKD 233          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.433e-26
Identity = 77/218 (35.32%), Postives = 113/218 (51.83%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCL 678
            M+AI + + G PEVL++Q +V  P  KD +VLIKV A  +N  +T  R G+Y         PG + +G + S+G +VS +K GD+V       GGYAE        V  +P  +  +  AA      T    +F ++    GES LVHG S G+G  A Q+ +  G++V  TAG EE   V    GA     ++   ++  +K+  G KGVDVI++ L
Sbjct:    8 MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEVFNHRDAHYIDEIKKSIGEKGVDVIIEML 225          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_PIG (Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.192e-26
Identity = 77/219 (35.16%), Postives = 120/219 (54.79%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCL 678
            M AI + + G PEV++LQ +V  P  KD++VLIKV A  +N  DT  R G++   K   PY PGL+ +G + +VG++VS +K GD+V  +    GGYAE        V  +P  +  K  AA      T    +  ++ +  GE  L+HG S G+G  A Q+ +  G++V  TAG EE   +    GA     ++  +++ ++K+  G KG+DVI++ L
Sbjct:    8 MSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHNM-KPLLPYTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYAEYALAADDTVYMLPEKLDFKQGAAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQNIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVIIEML 225          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QOR_ECOLI (Quinone oxidoreductase OS=Escherichia coli (strain K12) GN=qor PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.584e-25
Identity = 74/216 (34.26%), Postives = 106/216 (49.07%), Query Frame = 1
Query:   58 GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHFQRN 702
            G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP   S   G E +G +  VG  V   K GD+V  A    G Y+    + A +   +P+ +S + AAA      TV+  +  T  + P E FL H  + G+G  A Q  K  G ++  T G  +K       GA   I Y+ ED V R+KE TGGK V V+ D +G   ++R+
Sbjct:   11 GGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGL-GTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERS 225          
The following BLAST results are available for this feature:
BLAST of DY259953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
QORX_HUMAN8.633e-4844.00Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
QOR_BOVIN3.085e-2937.90Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
QOR_RAT1.999e-2836.12Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_PONAB5.817e-2834.36Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
QOR_MOUSE2.887e-2735.81Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
VAT1_DANRE3.771e-2736.28Synaptic vesicle membrane protein VAT-1 homolog OS... [more]
QOR_HUMAN1.433e-2633.04Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]
QOR_CAVPO1.433e-2635.32Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
QOR_PIG3.192e-2635.16Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 ... [more]
QOR_ECOLI1.584e-2534.26Quinone oxidoreductase OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259953 ID=DY259953; Name=DY259953; organism=Citrus clementina; type=EST; length=977bp
TTTAATTCTACTCTGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAAC
TCAACCCGGTAGCCCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTC
AAATCAAAGACGACGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAAC
CGGGCCGACACTCTTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGC
CAGCCCTTACCCGGGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTA
AAAACGTCTCTAGATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGT
GGAGGAGGGTATGCTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCC
CGTTCCATCTGGTGTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGG
CTTGCACTGTTTGGTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGG
GAGTCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAATG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCCTT
TACAAGACTGAGGATTTTGTTGCACGAATGAAGGAAGAAACTGGGGGGAA
AGGTGTTGATGTAATTTTAGATTGCCTGGGAACCTCCCACTTTCAGCGTA
ACCCTCCACAGCCCTGAACATTGATGGGAGGCTTTTCCTAATTGGACCCC
GGGTGGGACCAAAACCGAATTAAATATAACTTCCCCTGTTGCCAAACGCC
CCCTTGTGCAAGCGGTGGGTTCGCGAACCTAAAATAAAAAAAACAAAACT
TTATTTTCCTCGGGGCGGTAAAAAATGTTTGGCCCCCCACTGCCCATGGG
GAACGGGGACCCTCGCCTCCCCCTCTCTCCCCCCCTGCGGAAACCCCCCC
AACTCCCCCCCTCCCGGCGCAGAACCC
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