DY259957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: AB27B_ARATH (ABC transporter B family member 27 OS=Arabidopsis thaliana GN=ABCB27 PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.814e-65 Identity = 129/192 (67.19%), Postives = 161/192 (83.85%), Query Frame = 3 Query: 219 RAPLLDHGGRRKRNDASENGNVTDLEHGDAVPAANVGFGRVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNLSTAFIGLGF 794 R PLL + + + + SENG + DLEHG V AANVGFGRV ALAKPDAGKL+I T+ALLI S +++L+PKFGG IIDIVS D +TPEQ+ E+L AVR+ ++ I LIV++GS+CTALRAWLF+SASERVVA LRK+LF HL++QEIAFYDVT+TG+L ++LSEDT IKNAATTNLSEAL+N++TA IG+GF Sbjct: 22 RDPLLQNQEDKPKANGSENG-LNDLEHG-VVEAANVGFGRVFALAKPDAGKLVIGTIALLIGSTTNLLVPKFGGMIIDIVSRDVKTPEQQTESLIAVRNAVVIILLIVVIGSICTALRAWLFNSASERVVARLRKDLFRHLMHQEIAFYDVTKTGELLSRLSEDTQIIKNAATTNLSEALRNVTTALIGVGF 211
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: ABCB1_DICDI (ABC transporter B family member 1 OS=Dictyostelium discoideum GN=abcB1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 7.980e-21 Identity = 49/138 (35.51%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLS 749 R++ L++P+ ++ A VAL+ +S++S+ +P F G I+ +V+ + + S+ L++ +I ++GS+ T +R+WLF A ++ VA +R+NLFS ++NQEI ++D RTG+L ++LS D+ I+N+ T N+S Sbjct: 338 RLIQLSRPELPIILAAMVALVFSSLTSLAMPYFFGSIVQVVA--------TTHSFNNLNSSTLALVVIFVIGSISTLVRSWLFYLAGQKFVARIRRNLFSSIVNQEIGYFDQCRTGELLSRLSSDSQVIQNSVTVNIS 467
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: ABCBA_MOUSE (ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus musculus GN=Abcb10 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.379e-19 Identity = 53/152 (34.87%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNLSTAFIGLG 791 ++L L +P+ G+L A L ++SV ++ P F G+IID++ T E ++L + + + +FL G+ +R +L S+ + +V LR +LFS ++ QE+AF+D TRTG+L N+LS DT + + T NLS+ L+ + A +G+G Sbjct: 124 KLLGLVRPERGRLSAAVGFLAVSSVITMSAPFFLGRIIDVIY--TNPSEGYGDSLTRLCAVLTCVFLC---GAAANGIRVYLMQSSGQSIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVG 270
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.078e-17 Identity = 54/151 (35.76%), Postives = 90/151 (59.60%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNLSTAFIGL 788 ++L LA P+ +L A L ++SV S+ P F GKIID++ T ++ L + + ++FL G+ A+R +L ++ +R+V LR +LFS ++ QE+AF+D TRTG+L N+LS DT + + T NLS+ L+ + A +G+ Sbjct: 159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIY--TNPTVDYSDNLTRLCLGLSAVFLC---GAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGI 304
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: TAP2_RAT (Antigen peptide transporter 2 OS=Rattus norvegicus GN=Tap2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.105e-13 Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNL 767 R+L L+KPD LI+A + L +A + IP + G++IDI+ GD + A S I + L + S+ R F A R+ +R+ LFS L+ Q++AF+ T+TG+L ++LS DT + + N + L++L Sbjct: 140 RLLRLSKPDLPFLIVAFIFLAMAVWWEMFIPHYSGRVIDILGGDFDPD--------AFASAIFFMCLFSVGSSLSAGCRGGSFLFAESRINLRIREQLFSSLLRQDLAFFQETKTGELNSRLSSDTSLMSQWLSLNANILLRSL 275
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: MDL1_YEAST (ATP-dependent permease MDL1, mitochondrial OS=Saccharomyces cerevisiae GN=MDL1 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 3.590e-13 Identity = 44/156 (28.21%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFL----IVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNLSTAFIGLG 791 R+ L+KP++ + +A + +LI+S S+ +P GK++D+ S E+ +++ T F + I+G+V A R + ER+VA LR ++Q+ F D R GDL ++LS D + + T N+S+ + + F+G G Sbjct: 91 RLFVLSKPESKYIGLALLLILISSSVSMAVPSVIGKLLDLASESDGEDEEGSKSNKLYGFTKKQFFTALGAVFIIGAVANASRIIILKVTGERLVARLRTRTMKAALDQDATFLDTNRVGDLISRLSSDASIVAKSVTQNVSDGTRAIIQGFVGFG 246
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: TAP2_HUMAN (Antigen peptide transporter 2 OS=Homo sapiens GN=TAP2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.689e-13 Identity = 45/144 (31.25%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNL 767 R+L L++PD L+ A L++A + LIP + G++IDI+ GD + A S I + L S+ R F+ R+ +R+ LFS L+ Q++ F+ T+TG+L ++LS DT + N N + L++L Sbjct: 140 RLLKLSRPDLPLLVAAFFFLVLAVLGETLIPHYSGRVIDILGGDFDPH--------AFASAIFFMCLFSFGSSLSAGCRGGCFTYTMSRINLRIREQLFSSLLRQDLGFFQETKTGELNSRLSSDTTLMSNWLPLNANVLLRSL 275
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: TAP2_MOUSE (Antigen peptide transporter 2 OS=Mus musculus GN=Tap2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.969e-12 Identity = 48/153 (31.37%), Postives = 77/153 (50.33%), Query Frame = 3 Query: 336 RVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKNLSTAFIGLGF 794 R+L L++PD LI A L++A LIP++ G++IDI+ GD + A S I + L + S R F R+ +R+ LFS L+ Q++ F+ T+TG+L ++LS DT + N + L++L +GL F Sbjct: 139 RLLKLSRPDLPFLIAAFFFLVVAVWGETLIPRYSGRVIDILGGDFDPD--------AFASAIFFMCLFSVGSSFSAGCRGGSFLFTMSRINLRIREQLFSSLLRQDLGFFQETKTGELNSRLSSDTSLMSRWLPFNANILLRSL-VKVVGLYF 282
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.771e-12 Identity = 46/172 (26.74%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 261 DASENGNVTDLEHGD----AVPAANVGFGRVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKN 764 +A E GN + HG+ A A+ ++L+ KPD L+ A+ L++A++ +P + G+ ID + +++ + ++ + L+ I S+ +R +F+ R+ LR LF L++QE +F+D RTGDL ++L+ DT + + + N++ L+N Sbjct: 145 EALEPGN--EGFHGEGGAPAEQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDSIVIQ--------KSMDQFTTAVVVVCLLAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRN 306
BLAST of DY259957 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.771e-12 Identity = 46/172 (26.74%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 261 DASENGNVTDLEHGD----AVPAANVGFGRVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWLFSSASERVVAPLRKNLFSHLINQEIAFYDVTRTGDLPNQLSEDTPNIKNAATTNLSEALKN 764 +A E GN + HG+ A A+ ++L+ KPD L+ A+ L++A++ +P + G+ ID + +++ + ++ + L+ I S+ +R +F+ R+ LR LF L++QE +F+D RTGDL ++L+ DT + + + N++ L+N Sbjct: 145 EALEPGN--EGFHGEGGAPAEQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDSIVIQ--------KSMDQFTTAVVVVCLLAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRN 306 The following BLAST results are available for this feature:
BLAST of DY259957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259957 ID=DY259957; Name=DY259957; organism=Citrus clementina; type=EST; length=1082bpback to top |