DY259969

Overview
NameDY259969
Unique NameDY259969
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length963
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14862 contig Ccv1_Contig14862:2..964. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY259969 vs. ExPASy Swiss-Prot
Match: PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.573e-12
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1 
Query:   67 VIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQVQFD 339
            +IK E W  LYSGLK +L+G  AS  +YYY+Y L K+      ++ + + + +  +G    L +AALAG  NVL T PIWV+ TR+Q+  D
Sbjct:   78 IIKEENWRTLYSGLKSALIGIGASSFVYYYWYTLLKS------ISLKLKNKQE--LGTIENLAIAALAGCANVLTTLPIWVVNTRLQINSD 160
The following BLAST results are available for this feature:
BLAST of DY259969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PM34_DICDI2.573e-1242.86Mitochondrial substrate carrier family protein Q O... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YM21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259969 ID=DY259969; Name=DY259969; organism=Citrus clementina; type=EST; length=963bp
GCTAAGAAAGGTTTCCCGAATTGCCCTGCTGCTGCTTCTAGCAGCACGCT
TCGTCAGATCCTTGAGGTCATCAAAACTGAAGGTTGGGGGGGCCTTTACA
GCGGTCTTAAACCTTCTCTTGTCGGAACTGCTGCTTCTCAGGGTATTTAC
TACTACTTTTATCAGCTTTTCAAAAATAAGGCTGAGGCCTTTGTGGTTGC
GCGTGAAGCCAGAGGACGCGGGGATGGTTCTGTTGGCATGTTTTCTTGGC
TTATTGTTGCAGCCCTTGCTGGGTCATTGAATGTATTGCTCACAAACCCA
ATATGGGTTCTTGTGACCCGAATGCAGGTGCAATTTGATGTCCTAACCAC
ACACACTTTTTTCTTCCTTTAGTTTTCTTATTTGGTGAATGGCATGTTAC
TTTGACCATTCAAGACGCATACTCAAGCAGAAAGAAAAATCATGGAGGGA
AAGAGGGAAGCTCTTGTGAAGGAAGCTTTAGAAAGTTCAACTGGTTCAAC
TTTGCAAGACAAATTGGCTGAACTTGATTTAATAAAACCTCGTCCGTATG
GAACTTTCCCTGCGGCACGTGAGGTTTTAAATGAAACAGGAGTTGCTGGG
TTTTGGAAAAGGCATAATCCTAAACTTTATTATGATAAGCCCACAAATTG
AAAAATATGTGGAATAAAAATGACATTTATTCGTAAGCTCAACACAGGAA
AAGAACTCCCCTTGTTACTGTGCAAACACCCCAATCCGTTTACTGATAGA
AGATGGTGATTCGAGGTCTAAACGTCCAACCAAGCCTCGCACCACATAGT
TCAATAAACACAACACCCTTACACGCCTTCCTATCCTAGTACAACAATTA
ATACATAAACTACTATTTCTATTATATCCATTATCGCTCCTCAAACCCGC
GACAAACACACCAACAACTGCCCGGCAAACCTGATTTCACCCAGCCTACA
GACCATAAGATAA
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