DY259974

Overview
NameDY259974
Unique NameDY259974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length926
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN_DICDI (Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.226e-40
Identity = 88/229 (38.43%), Postives = 135/229 (58.95%), Query Frame = 2
Query:   71 DGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVI--GASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCK-EFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDE---SLVVHXXXXXXXXXXXXXXXXPLDVVKPR 739
            +G  F+  +I+G+ AG  EH  MYP+DT+KT +Q I  GA +        Q    +++  G  G +RG+ A+  GA P+HAV+FS+YEL K +F      ++ +   ++G  +T+ S+AV +PMD+VKQRLQL+ + YKG+ DC KR+ V+EGI  FY+ Y TT++MN P+  V+FA+YE++K+ +  +  N   +E    L+ H                P DVVK R
Sbjct:   12 EGGSFYVHLIAGAAAGFAEHCGMYPIDTIKTHIQAIKPGAMQ----TSSLQITKHIIQQHGITGLFRGLTAVAAGAAPSHAVHFSIYELLKFKFIGSDEDHHPIKVGIAGAIATMTSEAVASPMDVVKQRLQLQITDYKGLTDCTKRIWVKEGIRGFYSGYTTTLVMNVPYNIVYFASYESLKKIIQPWFNNKNPEERSYQLIDHLVAGGGAGMLAAAFTNPFDVVKTR 236          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN2_MOUSE (Mitoferrin-2 OS=Mus musculus GN=Slc25a28 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.551e-35
Identity = 87/243 (35.80%), Postives = 128/243 (52.67%), Query Frame = 2
Query:   17 FHPEISVNPSKTKE-TTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVP---NNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVK 733
            + P + ++P    E   +  G      M++G++AG +EH  MYP+D +KTRMQ +          V +A   +++ EG     RG+     GAGPAHA+YF+ YE  K+  S  +    N+ +A+  +G  +T+  DA + P ++VKQR+Q+ +SPY  V DCV+ V   EG GAFY SY T + MN PFQA+HF TYE ++     F+P    + S   H                PLDV K
Sbjct:   49 YQPPVRLDPESGPEYEALPAGATVTTHMVAGAVAGILEHCVMYPIDCVKTRMQSLQPDPAARYRNVLEALWRIMRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRSYTTQLTMNVPFQAIHFMTYEFLQE---HFNPQRRYNPS--SHVLCGACAGAVAAAATTPLDVCK 286          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN2_HUMAN (Mitoferrin-2 OS=Homo sapiens GN=SLC25A28 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.551e-35
Identity = 89/244 (36.48%), Postives = 127/244 (52.05%), Query Frame = 2
Query:   11 PDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVP---NNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVK 733
            PD  P+    P+    TT          M++G++AG +EH  MYP+D +KTRMQ +          V +A   +++ EG     RG+     GAGPAHA+YF+ YE  K+  S  +    N+ +A+  +G  +T+  DA + P ++VKQR+Q+ +SPY  V DCV+ V   EG GAFY SY T + MN PFQA+HF TYE ++     F+P    + S   H                PLDV K
Sbjct:   57 PDSGPDYEALPAGATVTT---------HMVAGAVAGILEHCVMYPIDCVKTRMQSLQPDPAARYRNVLEALWRIIRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRSYTTQLTMNVPFQAIHFMTYEFLQE---HFNPQRRYNPS--SHVLSGACAGAVAAAATTPLDVCK 286          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN1_DANRE (Mitoferrin-1 OS=Danio rerio GN=slc25a37 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.551e-35
Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVAS---DAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPN 637
            M +G++AG +EH  MYPVD++KTRMQ +          V  A   +++ EG     RG+    LGAGPAHA+YF+ YE  K   S  + N   +H  +GV  +VA+   DAV+ P ++VKQR+Q+ +SPY+ + DCV  V  +EG+ AFY SY T + MN PFQAVHF TYE ++     F+P+
Sbjct:   37 MTAGAVAGILEHTVMYPVDSVKTRMQSLQPDPKAQYRSVYGALKRIVRTEGLLRPLRGLNITVLGAGPAHALYFACYERIKRSLSDVIQNGGNSHIANGVAGSVATVLHDAVMNPAEVVKQRMQMYNSPYRSLYDCVLMVSRKEGLAAFYRSYSTQLTMNIPFQAVHFITYEFMQE---HFNPH 217          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN_DROME (Mitoferrin OS=Drosophila melanogaster GN=mfrn PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.924e-34
Identity = 77/213 (36.15%), Postives = 120/213 (56.34%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVK 733
            M +G+IAG +EH+ MYP+D++KTRMQ +  S P     +     +++  EG     RG +A+ LGAGPAH++YF+ YE+ KE  +      ++ + +SG  +T+  DA+ +P D++KQR+Q+ +SPY  V  CV+ +   EG  AFY +Y T ++MN P+Q +HF TYE  +  +     N     +  VH                PLDV+K
Sbjct:   18 MTAGAIAGVLEHVVMYPLDSVKTRMQSL--SPPTKNMNIVSTLRTMITREGLLRPIRGASAVVLGAGPAHSLYFAAYEMTKELTAKFTSVRNLNYVISGAVATLIHDAISSPTDVIKQRMQMYNSPYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQTIHFTTYEFFQNKM-----NLERKYNPPVHMAAGAAAGACAAAVTTPLDVIK 223          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN_CAEBR (Mitoferrin OS=Caenorhabditis briggsae GN=CBG02884 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.896e-33
Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNN--SMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL---MEFDPNS 640
            + +G++AG+VEH  M+P D++KTRMQ +       P  V  +  S++K EG     RG+ A+  G+ PAHA+YF+VYE  K F +G    +  ++A+  SGV +T+  DAV+ P ++VKQR+Q+  SPY    +C + V   EG  AFY SY T + MN PFQA+HF  YE  ++ L    ++DP S
Sbjct:   21 LAAGALAGAVEHCVMFPFDSVKTRMQSLCPCETKCPTPVH-SLMSIVKREGWLRPLRGVNAVAAGSMPAHALYFTVYEKMKSFLTGNTAGHEHTLAYGASGVVATLIHDAVMNPAEVVKQRMQMAYSPYGSSLECARCVYNREGFAAFYRSYTTQLAMNVPFQAIHFMGYEFWQQVLNPEHKYDPKS 206          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: YETC_SCHPO (Uncharacterized mitochondrial carrier C8C9.12c OS=Schizosaccharomyces pombe GN=SPAC8C9.12c PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 86/224 (38.39%), Postives = 124/224 (55.36%), Query Frame = 2
Query:   74 GLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVI-GASRPLHPAGVRQAFSSVLKLEGPAGFY---RGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVK 733
            G   +  +++G+ +G +EH  MYPVD +KTRMQ++ G SR +    V    +SV+K+    G Y   RGI+++ +GAGP+HA+YFSV E  K   +   P+  +A A++G  +   SDA +TP D++KQR+QL S  YK    C   V   EG+GAFY SY T + M+ PF A+  ATY+     L   +PN+  D +   H                PLDVVK
Sbjct:   16 GSPMYAHLLAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGNIV----NSVIKISSTEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKINAS-PDRPLASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFL---NPNAVYDPT--SHIISGGLSGAIASSLTTPLDVVK 229          

HSP 2 Score: 69.707 bits (169), Expect = 2.663e-11
Identity = 52/188 (27.66%), Postives = 85/188 (45.21%), Query Frame = 2
Query:   98 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSS-------PYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNS 640
            ++G+ A ++    M P D +K RMQ+   SR    A      ++V + EG   FY         + P  A+  + Y+ C  F +     +  +H +SG  S   + ++ TP+D+VK  LQ + S         KG  D V+ +    GI +F+   R  +++  P  AV +A YEA K  L+     S
Sbjct:  118 LAGACAITISDAFMTPFDVIKQRMQL--PSRKYKSA--LHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPTSHIISGGLSGAIASSLTTPLDVVKTLLQTRGSSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIRPRMVVAMPATAVSWAAYEAGKEILIRVSKTS 301          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN2_DANRE (Mitoferrin-2 OS=Danio rerio GN=slc25a28 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 74/188 (39.36%), Postives = 114/188 (60.64%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGV---PNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL---MEFDPNS 640
            M++G++AG +EH  M+P+D +KTRMQ +          V  A   +++ EG     RG+    +GAGPAHA+YF+ YE  K+  S  +    N+ +A+  +G  +T+  DA + P ++VKQR+Q+ +SPY+ V DC++ V   EG  AFY SY T + MN PFQA+HF TYE ++  L     ++P+S
Sbjct:   81 MLAGAVAGIMEHCLMFPIDCVKTRMQSLQPEPAARYRNVMDALWRIMRTEGIWRPIRGLNITAVGAGPAHALYFACYERLKKVLSDIIHPGANSHLANGAAGCVATLLHDAAMNPTEVVKQRMQMYNSPYRSVLDCMRCVWQREGALAFYRSYTTQLTMNVPFQALHFMTYEYLQELLNPQRHYNPSS 268          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN_CAEEL (Mitoferrin OS=Caenorhabditis elegans GN=W02B12.9 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVP--NNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL---MEFDPNS 640
            + +G++AG+VEH  M+P D++KTRMQ +             +  S++K EG     RG+ A+  G+ PAHA+YF+VYE  K + +G     +N++A+  SGV +T+  DA++ P ++VKQR+Q+  SPY    +C + V   EG+ AFY SY T + MN PFQA+HF +YE  +  L    ++DP S
Sbjct:   21 LTAGALAGAVEHCVMFPFDSVKTRMQSLCPCPETKCPTPVHSLMSIVKREGWLRPLRGVNAVAAGSMPAHALYFTVYEKMKGYLTGNSAGHSNTLAYGASGVVATLIHDAIMNPAEVVKQRMQMAFSPYGSSLECARCVYNREGVAAFYRSYTTQLAMNVPFQAIHFMSYEFWQHVLNPEHKYDPKS 207          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MFRN1_HUMAN (Mitoferrin-1 OS=Homo sapiens GN=SLC25A37 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.229e-32
Identity = 72/174 (41.38%), Postives = 107/174 (61.49%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKE-----FFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYE 601
            M +G++AG +EH  MYPVD++KTRMQ +          +  A   +++ EG     RG+  M +GAGPAHA+YF+ YE  K      F   G  N+ +A+ ++G  +T+  DAV+ P ++VKQRLQ+ +S ++    C++ V   EG+GAFY SY T + MN PFQ++HF TYE
Sbjct:   49 MTAGAMAGILEHSVMYPVDSVKTRMQSLSPDPKAQYTSIYGALKKIMRTEGFWRPLRGVNVMIMGAGPAHAMYFACYENMKRTLNDVFHHQG--NSHLANGIAGSMATLLHDAVMNPAEVVKQRLQMYNSQHRSAISCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYE 220          
The following BLAST results are available for this feature:
BLAST of DY259974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
MFRN_DICDI1.226e-4038.43Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=... [more]
MFRN2_MOUSE1.551e-3535.80Mitoferrin-2 OS=Mus musculus GN=Slc25a28 PE=2 SV=1[more]
MFRN2_HUMAN1.551e-3536.48Mitoferrin-2 OS=Homo sapiens GN=SLC25A28 PE=2 SV=1[more]
MFRN1_DANRE1.551e-3543.48Mitoferrin-1 OS=Danio rerio GN=slc25a37 PE=1 SV=1[more]
MFRN_DROME2.924e-3436.15Mitoferrin OS=Drosophila melanogaster GN=mfrn PE=1... [more]
MFRN_CAEBR1.896e-3341.18Mitoferrin OS=Caenorhabditis briggsae GN=CBG02884 ... [more]
YETC_SCHPO4.223e-3338.39Uncharacterized mitochondrial carrier C8C9.12c OS=... [more]
MFRN2_DANRE4.223e-3339.36Mitoferrin-2 OS=Danio rerio GN=slc25a28 PE=2 SV=1[more]
MFRN_CAEEL5.515e-3339.57Mitoferrin OS=Caenorhabditis elegans GN=W02B12.9 P... [more]
MFRN1_HUMAN1.229e-3241.38Mitoferrin-1 OS=Homo sapiens GN=SLC25A37 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259974 ID=DY259974; Name=DY259974; organism=Citrus clementina; type=EST; length=926bp
ATATCGGACCCCCGATTTCCACCCCGAAATCTCGGTAAACCCCTCCAAAA
CAAAAGAAACAACAATACACGACGGCCTCGAGTTCTGGCAGTTCATGATT
TCCGGGTCCATCGCGGGCTCCGTTGAGCACATGGCCATGTACCCAGTTGA
CACCCTCAAGACCCGCATGCAAGTCATAGGGGCGTCTCGCCCGCTTCATC
CCGCCGGCGTCCGTCAAGCCTTTAGCTCAGTGCTCAAGCTGGAGGGCCCG
GCAGGGTTTTACCGAGGAATTGCAGCTATGGGACTCGGCGCAGGACCCGC
ACACGCTGTTTACTTCTCGGTTTACGAGCTCTGTAAAGAGTTCTTCTCAG
GTGGGGTCCCTAATAACTCAATGGCTCACGCTGTGTCGGGTGTCTTCTCG
ACGGTGGCGAGTGATGCTGTGATTACGCCCATGGATATGGTGAAGCAGAG
GCTTCAGCTCAAGAGCAGTCCATACAAGGGAGTCCCAGACTGTGTCAAGA
GAGTGTTAGTTGAGGAAGGAATCGGCGCGTTTTACGCTTCATATAGGACT
ACGGTGATCATGAACGCGCCGTTTCAAGCAGTTCATTTCGCCACTTATGA
GGCAGTAAAGAGAGCTTTGATGGAATTTGACCCAAACAGTGGGAGTGATG
AGAGTTTAGTGGTTCATGCAACAGCCGGTGCGGCTGCCGGAGCTCTGGCC
GCTACCTTGACAACGCCCCTTGATGTTGTAAAACCCCGTTGCCGTGCCGG
GTGGCCGTGGGCGGGATAGATTTTCAAGCGTTCAATTGGGAATGGCATGA
AACCGGCCGGGGGAAAAAGGAATCCGGGGGCCTTTGGAAGGGGGGACCCC
CCAAAGGCGGTTACGGGTCCGGCCGCCCCCATCTGGGGGGTCAAAAACAA
ACCACCAAAATTCTTTCTTACACCAT
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