DY260027

Overview
NameDY260027
Unique NameDY260027
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1062
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PT110_ORYSJ (Probable inorganic phosphate transporter 1-10 OS=Oryza sativa subsp. japonica GN=PHT1-10 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.236e-60
Identity = 124/215 (57.67%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   40 VLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQI-PNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRDNDVNKRQHQADIAWRLILMLGSIPAA 681
            VL ALD A+TQYYHF+AI+IAGMGL TD+YDLFCI P+MK++GR+YYSDG  R  + P AVVS  + +ALLG VIG +VFG LGD +GRRRVYG             GFS+C T++C                  DYPLSATIMSEFAN+ TRGAFIAAVFSMQGFGILASS VTMAV   F+  +T           AD+AWR+ILM G++PAA
Sbjct:    6 VLTALDQARTQYYHFKAIVIAGMGLFTDSYDLFCIAPVMKIVGRVYYSDGGARPGVTPPAVVSATVGVALLGAVIGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGFSVCRTRRCALASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFSMQGFGILASSAVTMAVAAAFD-HYTGYPAPLDTPECADLAWRIILMAGAVPAA 219          

HSP 2 Score: 22.7126 bits (47), Expect = 1.236e-60
Identity = 9/20 (45.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  660 AGFYSGCFPYYWPMTMP*SA 719
            AG       YYW M+MP +A
Sbjct:  213 AGAVPAALTYYWRMSMPETA 232          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT18_ARATH (Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 9.403e-59
Identity = 122/217 (56.22%), Postives = 147/217 (67.74%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQ-CVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRDNDVNKRQHQADIAWRLILMLGSIPAA 681
            +KVL +LD A+TQ+YHF+AII+AGMGL TDAYDLFCI P+MK++  +YY+  +    I  AV+S   A+ALLGT  GQLVFG LGD +GRRRVYG            CGFS+CTT++ CV                 DYPLSATIMSEFANK TRGAFIAAVFSMQG GIL SS VTMAVC  F+ +            +AD+AWRLILM+G++PAA
Sbjct:    3 IKVLSSLDVARTQWYHFKAIIVAGMGLFTDAYDLFCIAPVMKMISHVYYNGDS----INTAVLSTSYAIALLGTATGQLVFGYLGDRVGRRRVYGLCLIIMILSSFGCGFSVCTTRRSCVMVSLGFFRFFLGLGIGGDYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILVSSAVTMAVCVAFKRSGGGLEVDAAAPTEADLAWRLILMIGALPAA 215          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT19_ORYSJ (Probable inorganic phosphate transporter 1-9 OS=Oryza sativa subsp. japonica GN=PHT1-9 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.330e-56
Identity = 118/223 (52.91%), Postives = 143/223 (64.13%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYS-------DGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRDNDVNKRQHQADIAWRLILMLGSIPAA 681
            ++VL ALD A+TQYYHF+AI+IAGMGL TD+YDLFCI P+MK+ GR+YY+        G+     P AVVS  + +ALLG V G +VFG LGD +GRRRVYG             G S+C T++C                  DYPLSATIMSEFAN+ TRGAFIAAVFSMQGFGIL SS VTMAV   F+  +T           AD+AWR+ILM G++PAA
Sbjct:    5 IRVLAALDQARTQYYHFKAIVIAGMGLFTDSYDLFCISPVMKIFGRVYYAPSGSVDGSGSGPGVTPPAVVSATVGVALLGAVAGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGLSVCRTRRCALASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFSMQGFGILVSSAVTMAVAAAFD-HYTGYPAPLDTPECADLAWRIILMAGAVPAA 226          

HSP 2 Score: 22.7126 bits (47), Expect = 1.330e-56
Identity = 9/20 (45.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  660 AGFYSGCFPYYWPMTMP*SA 719
            AG       YYW M+MP +A
Sbjct:  220 AGAVPAALTYYWRMSMPETA 239          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT19_ARATH (Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.501e-56
Identity = 121/224 (54.02%), Postives = 148/224 (66.07%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQ-CVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIF----EATHTRDNDVNKR---QHQADIAWRLILMLGSIPAA 681
            L +L ALD+A+ Q+YHF+AII+AGMGL TDAYDLFCI PIMK++ +IYY   +    I  A++S   A+ALLGT +GQL+FG LGD +GRR+VYG            CGFS+CTT++ CV                 DYPLSATIMSEFANK TRGAFIAAVFSMQG GIL SS VTM VC  F    E +  + N          ++DIAWRLILM+G++PAA
Sbjct:    4 LSLLSALDAARIQWYHFKAIIVAGMGLFTDAYDLFCIAPIMKMISQIYYHKDS----IGTALLSTSYAIALLGTALGQLIFGYLGDRVGRRKVYGLSLLIMVFSSFGCGFSVCTTRRSCVMVSLGFFRFVLGLGIGGDYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILMSSAVTMVVCLAFKNAGEGSSEKTNVAGLETLAPPESDIAWRLILMIGALPAA 223          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PT112_ORYSJ (Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.505e-48
Identity = 111/221 (50.23%), Postives = 133/221 (60.18%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRF--QIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRD----NDVNKRQHQADIAWRLILMLGSIPA 678
            L+VL ALD+AKTQ+YHF AII+AGMG  TDAYDLFCI  + KLLGRIYY+D A      +P  + + +  +AL GT+ GQL FG LGD +GR+ VYG             G S   T   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   VT+A+   F+A         N       QAD  WR+ILMLG++PA
Sbjct:    8 LQVLNALDAAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYTDPASPTPGSLPPNIAAAVNGVALCGTLSGQLFFGWLGDKLGRKSVYGMTLLLMVICSIASGLSFSHTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVTLAMSAGFQAAFPAPAYEVNAAASTVPQADYVWRIILMLGALPA 228          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT18_ORYSJ (Probable inorganic phosphate transporter 1-8 OS=Oryza sativa subsp. japonica GN=PHT1-8 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.965e-48
Identity = 109/221 (49.32%), Postives = 133/221 (60.18%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGA--DRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHT----RDNDVNKRQHQADIAWRLILMLGSIPA 678
            L+VL ALD+AKTQ+YHF AI++AGMG  TDAYDLFCI  + KLLGRIYY+D A  +   +P  V + +  +A  GT+ GQL FG LGD +GR+ VYG             G S   T   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   VT+ +   F A       +D+       QAD  WR+ILMLG++PA
Sbjct:   10 LQVLSALDAAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYTDLAKENPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKSVYGMTLLMMVICSIASGLSFSHTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVTLIISSAFRAGFPAPAYQDDRAGSTVRQADYVWRIILMLGAMPA 230          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT17_ORYSJ (Probable inorganic phosphate transporter 1-7 OS=Oryza sativa subsp. japonica GN=PHT1-7 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.664e-47
Identity = 111/233 (47.64%), Postives = 135/233 (57.94%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYY-SDGADR-FQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFE----ATHTRDNDVNKRQHQADIAWRLILMLGSIPAAFPIIGL*RCPD 714
            + VL ALDSAKTQ+YHF AI+IAGMG  TDAYDLFCI  + KL+GR+YY +DGA +   +P  V + +  +A +GT+ GQL FG LGD +GR+ VYG             G S   T   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   V + +  IF     A     +       QAD  WRLILM G++PAA       R P+
Sbjct:    6 MHVLSALDSAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLIGRVYYTADGASKPGSLPPNVSAAVNGVAFVGTLTGQLFFGWLGDRVGRKSVYGMTLLLMIICSVASGLSFGDTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGAVAIGITAIFRSRFPAPPFAADPAASTPPQADYVWRLILMFGALPAALTFYWRMRMPE 238          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT11_ORYSJ (Inorganic phosphate transporter 1-1 OS=Oryza sativa subsp. japonica GN=PHT1-1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.771e-47
Identity = 109/222 (49.10%), Postives = 131/222 (59.01%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRF--QIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFE----ATHTRDNDVNKRQHQADIAWRLILMLGSIPAA 681
            L VL  LD AKTQ+YHF AI+IAGMG  TDAYDLFCI  + KLLGRIYY+D +      +P  V + +  +AL GT+ GQL FG LGD +GR+ VYG             G S  ++ + V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGIL  + V +AV   F     A    DN       QAD  WR+ILM G++PAA
Sbjct:    6 LNVLSTLDQAKTQWYHFMAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDDSKDTPGALPPNVSAAVTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSVASGLSFGSSAKGVVSTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGAIVALAVSAGFRHAYPAPSYSDNHAASLVPQADYVWRIILMFGTVPAA 227          

HSP 2 Score: 20.4014 bits (41), Expect = 4.771e-47
Identity = 8/19 (42.11%), Postives = 9/19 (47.37%), Query Frame = 3
Query:  663 GFYSGCFPYYWPMTMP*SA 719
            G       YYW M MP +A
Sbjct:  222 GTVPAALTYYWRMKMPETA 240          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PT111_ORYSJ (Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.078e-46
Identity = 101/224 (45.09%), Postives = 138/224 (61.61%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVV----SPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIF-----EATHTRDNDVNKRQHQADIAWRLILMLGSIPA 678
            L VL ALDSA+TQ YH +AI+IAGMG  TDAYDLFCI  + KLLGR+YY         P A+     + ++ +AL+GT++GQLVFG  GD +GR+RVYG             G S  ++++ V                 DYPLSATIMSE++NK TRGAFIAAVF+MQG GI+ +  V+M V  IF       ++  ++D++++   AD  WR++LM+G+ PA
Sbjct:   10 LAVLDALDSARTQMYHMKAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYQPDGSTDSKPGALSKTANNMVIGVALVGTLMGQLVFGYFGDKLGRKRVYGVTLILMAACAIGSGLSFGSSRKAVIGTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGVGIIFAGLVSMIVSSIFLTYNKAPSYKGNHDLSRQMPAADYVWRIVLMIGAFPA 233          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT13_ORYSJ (Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.338e-46
Identity = 107/222 (48.20%), Postives = 132/222 (59.46%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSD--GADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRDNDVNKRQ----HQADIAWRLILMLGSIPAA 681
            LKVL  LD A+TQ+YHF AI+IAGMG  TDAYDLFCI  + KLLGRIYY+D  G +   +P  V + +  +AL GT+ GQL FG LGD +GR+ VYG             G S   T + V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGIL  + V + V   F   +   +  + R      +AD  WR+ILM G++PAA
Sbjct:    6 LKVLTTLDHARTQWYHFMAIVIAGMGFFTDAYDLFCISLVSKLLGRIYYTDLAGDNPGSLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLVLMVVCSVASGLSFGRTAKGVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGAIVALVVSAGFRNAYPAPSYADGRAASLVPEADYVWRIILMFGTVPAA 227          

HSP 2 Score: 20.4014 bits (41), Expect = 2.338e-46
Identity = 8/19 (42.11%), Postives = 9/19 (47.37%), Query Frame = 3
Query:  663 GFYSGCFPYYWPMTMP*SA 719
            G       YYW M MP +A
Sbjct:  222 GTVPAALTYYWRMKMPETA 240          
The following BLAST results are available for this feature:
BLAST of DY260027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PT110_ORYSJ1.236e-6057.67Probable inorganic phosphate transporter 1-10 OS=O... [more]
PHT18_ARATH9.403e-5956.22Probable inorganic phosphate transporter 1-8 OS=Ar... [more]
PHT19_ORYSJ1.330e-5652.91Probable inorganic phosphate transporter 1-9 OS=Or... [more]
PHT19_ARATH1.501e-5654.02Probable inorganic phosphate transporter 1-9 OS=Ar... [more]
PT112_ORYSJ1.505e-4850.23Probable inorganic phosphate transporter 1-12 OS=O... [more]
PHT18_ORYSJ1.965e-4849.32Probable inorganic phosphate transporter 1-8 OS=Or... [more]
PHT17_ORYSJ1.664e-4747.64Probable inorganic phosphate transporter 1-7 OS=Or... [more]
PHT11_ORYSJ4.771e-4749.10Inorganic phosphate transporter 1-1 OS=Oryza sativ... [more]
PT111_ORYSJ1.078e-4645.09Inorganic phosphate transporter 1-11 OS=Oryza sati... [more]
PHT13_ORYSJ2.338e-4648.20Probable inorganic phosphate transporter 1-3 OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260027 ID=DY260027; Name=DY260027; organism=Citrus clementina; type=EST; length=1062bp
CGGAGATAAGAAAAAAATAAATAAGAATGGGCGTTGAAAGTGCTCCCAGC
GCTAGACTCAGCAAAGACCCAGTACTATCACTTCCAAGCCATAATAATAG
CCGGGATGGGGCTCCTTACCGATGCCTATGACCTCTTCTGTATCCCGCCC
ATCATGAAGCTCCTCGGAAGAATCTACTACAGCGATGGCGCCGATCGATT
CCAAATCCCAAACGCGGTCGTATCGCCGATGTTAGCCCTGGCTTTACTGG
GCACGGTGATAGGGCAGCTGGTCTTCGGCAGACTAGGTGACCTCATCGGA
CGTCGGCGCGTGTACGGATTAGCATTGATGTTGATGGTGCTTAGCTCCCT
TGCATGTGGCTTCTCCATTTGCACCACTAAACAATGCGTCCTCGGGAGTC
TAGGCTTCTTCAGGTTCTTGCTTGGAGTTGGCATCGGCGGGGACTATCCC
TTATCTGCTACCATCATGTCCGAGTTCGCTAACAAGATGACGCGTGGCGC
CTTCATTGCGGCGGTTTTTTCTATGCAGGGCTTTGGTATCTTGGCCAGCT
CTACGGTCACCATGGCGGTTTGCAAAATCTTTGAGGCAACCCACACTCGG
GACAACGATGTCAACAAGAGGCAGCATCAAGCTGATATTGCCTGGAGGTT
GATTCTCATGCTGGGTTCTATTCCGGCTGCTTTCCCTATTATTGGCCTAT
GACGATGCCCTGATCCGCAGATACCCGGCTTTGGTGGACCAAATGTAATG
CACCCGCCAAAAGACTGGAGAAAGTACCAAACGTATCCATAACCCAATTG
CCGAGGAATATCCCTTGCCCCCATTCCCCCCCCTACCCCTATCCCCCAAC
CCTTCCCACCCCCACCCGCCCCCACCTCATCCCCCGCCCCCCCCCGGGGC
GCCCCCCAAACTACCCTCCACGAACCCCCCCCCCCCAACCCAAAACCCCC
CCCCCTACCTTGGGGGCCCCCGGCCCGACCCCACCCCCGGGGCCTTTTTA
AAAACCCCCCCAATTTGAAAAACCCCCACCCTTTTCCCCCTTTTTCCCCC
CCCCCCCGGGTT
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