DY260029

Overview
NameDY260029
Unique NameDY260029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1093
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 1.160e-51
Identity = 94/168 (55.95%), Postives = 122/168 (72.62%), Query Frame = 2
Query:  296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFHGAEYVSTGIQTVVEKETYHPGIVLCAVAVK*PWFRAPIP*NKTQQ 799
            DA   GE+VFGG+DPKH+KG HTYVPV++KGYWQFN+GD+LI   STG C  GCAAIVDSGTSLLAGPT +V ++NHAIG EG++S ECK VVS+YG++I +LL++   P+KVC Q+GLC F G   VS GI++VV+KE      +     +   W    +  NKT++
Sbjct:  224 DASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENLGSDAMCSVCEMAVVWIENQLRENKTKE 391          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.585e-51
Identity = 98/171 (57.31%), Postives = 128/171 (74.85%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFHGAEYVSTGIQTVVEK------ETYHPGIV-LCAVAVK*PWFRAPIP*NKTQQR 802
            GEIVFGGVDPKH++GKHTYVPVT+KGYWQF++GD+LI  + TG C+GGC+AI DSGTSLLAGPTPV+T INHAIG +GVVS +CK VV+QYG  I DLL+S   P+K+C QI LC F G   VS GI++VV++      ++ H G+  +C + V   W +  +  N+T++R
Sbjct:  241 GEIVFGGVDPKHYRGKHTYVPVTQKGYWQFDMGDVLIDGEPTGFCDGGCSAIADSGTSLLAGPTPVITMINHAIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTV--VWMQNQLRQNQTKER 409          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.858e-50
Identity = 98/179 (54.75%), Postives = 123/179 (68.72%), Query Frame = 2
Query:  281 LKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFHGAEYVSTGIQTVVEKETY-------HPGIVLCAVAVK*PWFRAPIP*NKTQ 796
            L   +D    GEI+FGG+DPKH+ G+HTYVPVT+KGYWQF++GD+L+G +STG C GGCAAI DSGTSLLAGPT ++TEIN  IG  GVVS ECK +VSQYG  I DLL++   P+K+C Q+GLC F G   VS GI++VV+ E          P    C +AV   W +  +  NKTQ
Sbjct:  226 LNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAV--VWMQNQLAQNKTQ 402          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 3.494e-48
Identity = 95/169 (56.21%), Postives = 116/169 (68.64%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFHGAEYVSTGIQTVVEKETYH-------PGIVLCAVAVK*PWFRAPIP*NKTQ 796
            GEIVFGG+DP H+KG HTYVPV++KGYWQF +GD+LIG ++TG C  GC+AI DSGTSLLAGPT ++TEIN  IG  GVVS ECK VVSQYG  I DLL++   P K+C Q+GLC F G   VS GI++VV+ E          P    C +AV   W +  +  NKTQ
Sbjct:  237 GEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAV--VWMQNQLAQNKTQ 403          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 2.344e-44
Identity = 83/138 (60.14%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFHGAEYVSTGIQTVVEK 709
            D Q  GE+VFGGVDP HFKG+HTYVPVT+KGYWQF +GD+LIG+++TG C  GCAAI DSGTSLLAG T +VT+IN AIG  GV+S +CK +V QYG  + ++L+S   PEK+C Q+ LC+F G+   S  I++VV+K
Sbjct:  198 DEQEGGELVFGGVDPNHFKGEHTYVPVTQKGYWQFEMGDVLIGDKTTGFCASGCAAIADSGTSLLAGTTTIVTQINQAIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDK 335          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 6.851e-28
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 2
Query:  281 LKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEG 544
            L   +D +  GE+VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG  G
Sbjct:  127 LNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGANG 214          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.400e-27
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 2
Query:  281 LKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            L   +D +  GE+VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  113 LNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 197          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.400e-27
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 2
Query:  281 LKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            L   +D +  GE+VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  113 LNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 197          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.400e-27
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 2
Query:  281 LKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            L   +D +  GE+VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:   71 LNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 155          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.068e-16
Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE----CKLV 571
            GEI+FGG D   + G  TY+ V +K YWQF +  + +G+  T  C  GC AI D+GTSL+AGP   VT IN AIGG  +++ E    C L+
Sbjct:  221 GEIIFGGSDSNKYTGDFTYLSVDRKAYWQFKMDSVKVGD--TEFCNNGCEAIADTGTSLIAGPVSEVTAINKAIGGTPIMNGEYMVDCSLI 309          
The following BLAST results are available for this feature:
BLAST of DY260029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ASPRX_ORYSJ1.160e-5155.95Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR_CUCPE2.585e-5157.31Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU2.858e-5054.75Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ3.494e-4856.21Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA2.344e-4460.14Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
CARDF_CYNCA6.851e-2862.50Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDH_CYNCA3.400e-2763.53Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDG_CYNCA3.400e-2763.53Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA3.400e-2763.53Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]
ASPP_AEDAE2.068e-1646.15Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260029 ID=DY260029; Name=DY260029; organism=Citrus clementina; type=EST; length=1093bp
CTTCACTTTACCTTGCTTCCAACTCAGCTTCAGCAGAAAACCAAAGAACA
TCCTGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCG
TCCTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGAATTGGCTT
GAAGAAGCGGCGTCCAGATCTTCATAGTCTAAATGCTGCAAGAATAACAA
GAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGT
TTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAACTTTATGGATGC
TCAATACTTTGGAGAGATTGTTTTTGGTGGTGTTGATCCAAAGCACTTTA
AAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACTGGCAGTTC
AATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTTTGTGAGGG
TGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGCCGGTCCAA
CACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAGGAGTTGTT
AGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTAATATGGGA
TCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTT
TATGTGCTTTCCATGGCGCTGAATATGTGAGTACTGGGATCCAGACCGTG
GTTGAAAAGGAAACGTATCACCCGGGGATAGTGCTGTGTGCCGTGGCTGT
GAAATGACCGTGGTTTCGGGCCCCAATCCCCTAAAACAAAACCCAACAAA
GGAAAAGTCCTCCGTTATAAAATGACCCTCGCAACGCCCGCCAAATCCCA
AGGGAAAATCATTTATGGACGGGGGCCCCCTTCCACCCTGGCCAAAGGTT
CCTCCCCCCCCGAAAACAAATTTTCCCCCCCCCCCCCAACCCTTAATTCC
GAAACCCCGAAAAGGGATGCCAAATTCCCCCCTCTGGGCTTCCGGGCCTT
CCCCCCCCCCCCCCCCCGGGGGCCCCCCGGGGATCCGGGGGAAGTGTTTC
CCGGGGGGGTTTCCCCCCCCGTTTCCCCCCCCGGGGGAACCCC
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