DY260040

Overview
NameDY260040
Unique NameDY260040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1399 contig Ccv1_Contig1399:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY260040 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.427e-44
Identity = 80/151 (52.98%), Postives = 102/151 (67.55%), Query Frame = 1 
Query:  103 QQQHANVHQLVEGPWSSGLCDCFSDXXXXXXXXXXXXXXFGRIADIVDKGSSSCSVSGALFLVISLVTGCGCLYSACYRSKMRQQYMLKGGPCGDCLAHFCCETCALSQEYRELKARGFDMSLGWHGNLERQNRGLEMAPTAPVMEHGMIR 555
            + QH +     EG WS+G CDCFSD              FG++A+IVD+GS+SC  +GAL+ +I++VTGC C+YS  YR KMR QY +KG  C DCL HFCCE C+L+Q+YRELK RG+DMSLGW GN+ERQ     +A  APV + GM R
Sbjct:    2 EAQHLHAKPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQNQGGVAMGAPVFQGGMTR 152
The following BLAST results are available for this feature:
BLAST of DY260040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH5.427e-4452.98Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP11YA23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260040 ID=DY260040; Name=DY260040; organism=Citrus clementina; type=EST; length=789bp
CAAGATTGTAACCTTTTGTCGATCATCATGAACTCATCTAGTTACCCAAA
CCAGAAGTTTGATCATCAGCACGTGGCAACCGGCGTACCGGTAGCTGGTT
TCCAGCAGCAACATGCGAATGTGCATCAGCTCGTAGAGGGACCTTGGTCC
TCAGGACTCTGTGACTGCTTCTCCGATTGCTCAACCTGTTGCTTGACATG
TTGGTGCCCCTGCATCACTTTTGGTCGAATTGCGGATATTGTTGACAAAG
GATCTTCTTCTTGTAGTGTGAGTGGCGCACTGTTTCTTGTAATATCTTTG
GTGACTGGCTGCGGGTGCTTATACTCGGCCTGCTATCGATCTAAAATGAG
GCAGCAGTACATGTTAAAAGGCGGGCCTTGCGGGGATTGCTTGGCTCATT
TTTGCTGCGAGACGTGTGCCTTGAGTCAAGAATATCGCGAGCTCAAAGCC
CGTGGATTCGACATGTCTCTTGGATGGCATGGAAATTTGGAGAGACAAAA
TAGGGGATTGGAAATGGCTCCAACGGCTCCGGTAATGGAACATGGCATGA
TAAGATAAAGTGGATGATCTGCAAATATACAAAATGAATTCGTCTACCTA
ATTTTAAATAATTAGTAGACATGTGAAGCTGATAATTATATGCTGTTATC
TTAATTATTTAGCTGTTTTAGATCTTCCTCTCAACATCCAGCGTTTGTAG
CTCTTTAAGCCTTTGAAGTTTGAAATTTCTTTTATGTACCTTTTCTCTTT
ATTTTATTAATTGATAATAAAAAATTATTATCTTCCAAT
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