DY260058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260058 vs. ExPASy Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.156e-34 Identity = 94/226 (41.59%), Postives = 115/226 (50.88%), Query Frame = 1 Query: 4 QDDYRSFLHISSAFSSLIVSTLLQNPXXXXXXXXXXTFWPYTNMETSADSPTCPQGGFLSRQMSSPPSMXXXXXXXXXXXXXXXXXHGLLPLCAPFHTPFTCPPACATAVSSMDTAQVPA-AKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESASAKLKMELKATDH--EKNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDAL 672 QDDYRSFL ISS FS+LI+STLLQNP + WPY ++ S DS T SSPPS+ HGLLP+CAP P TC P AV + PA + D +NT QP + + ALQ QN ASKS + DS+E+ KL + K D E+ +HDSN + + VDRSSCGSNTPS S+ ETDAL Sbjct: 284 QDDYRSFLQISSTFSNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDSST--------PMSSSPPSITAIAAATVAAATAWWASHGLLPVCAP--APITCVPFSTVAVPT------PAMTEMDTVENT---------QPFEKQNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQKKNLVDRSSCGSNTPSGSDAETDAL 484 HSP 2 Score: 30.0314 bits (66), Expect = 1.156e-34 Identity = 19/40 (47.50%), Postives = 22/40 (55.00%), Query Frame = 3 Query: 747 RSRTSSN--ITDSWKEVSEVGAAGFSSTPPLERYCPPTFS 860 R S+N TDSWKEVSE G F + ER P +FS Sbjct: 515 RDNNSNNNATTDSWKEVSEEGRIAFQALFARER-LPQSFS 553
BLAST of DY260058 vs. ExPASy Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.699e-18 Identity = 69/220 (31.36%), Postives = 97/220 (44.09%), Query Frame = 1 Query: 40 AFSSLIVSTLLQNPXXXXXXXXXXTFWPYTNMETSADSPTCPQGGFLSRQMSSPPSMXXXXXXXXXXXXXXXXXHGLLPLCAPF-------HTPFTCPPACATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESASAKLKMELKATDHEKNSE--ENELHDSNKTKNRKQVDRSSCGSNTPSSS-EVETDA 669 +F + I+STLLQ P +FWP ++S SP +SPP++ +GLLPLCAP H P T P+C + T Q + ++ + E+SEA +A++S L S+ E+ S K HE+ S E++ S+ +RKQVDRSSCGSNTPSSS +VE DA Sbjct: 263 SFPNHIMSTLLQTPALYTAATFASSFWP---PDSSGGSPV---------PGNSPPNLAAMAAATVAAASAWWAANGLLPLCAPLSSGGFTSHPPSTFGPSCDVEYTKASTLQHGSVQSREQ----------------EHSEASKARSS-------LDSEDVENKS-------KPVCHEQPSATPESDAKGSDGAGDRKQVDRSSCGSNTPSSSDDVEADA 440 HSP 2 Score: 36.965 bits (84), Expect = 7.699e-18 Identity = 19/37 (51.35%), Postives = 22/37 (59.46%), Query Frame = 3 Query: 714 SESPCTDPGN-RRSRTSSNITDSWKEVSEVGAAGFSS 821 + P T N RRSR SSNITD WK VS+ G F + Sbjct: 459 TNKPQTSESNARRSRISSNITDPWKSVSDEGRIAFQA 495 The following BLAST results are available for this feature:
BLAST of DY260058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260058 ID=DY260058; Name=DY260058; organism=Citrus clementina; type=EST; length=967bpback to top |