DY260075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260075 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.581e-50 Identity = 91/168 (54.17%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 292 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGPAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLPHMTAR 795 +L DFGGVGDG TLNT+AFQ AV +SK G +GG QL VP G+WLT F+LTSH TLFL DA +LA ++ WP++ PLPSYG GR+ R+ S I G NL DV+ITG NGTI+GQG WW+++ L TR L+++M+S+DI ISN+TL +SP W + + +R Sbjct: 64 SLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSR 231 HSP 2 Score: 32.7278 bits (73), Expect = 5.581e-50 Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 2 Query: 830 PI*TPNPEGIDPHSCQELVN*DCSIMLGDEPLP*RVEGDPY*IS*G 967 P+ +PN +GI+P SC DC I+ GD+ + + D Y I+ G Sbjct: 243 PVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 288 The following BLAST results are available for this feature:
BLAST of DY260075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260075 ID=DY260075; Name=DY260075; organism=Citrus clementina; type=EST; length=1059bpback to top |