DY260098

Overview
NameDY260098
Unique NameDY260098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length971
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14117 contig Ccv1_Contig14117:88..1057. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_SOYBN (Phosphomannomutase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 4.300e-116
Identity = 202/226 (89.38%), Postives = 214/226 (94.69%), Query Frame = 2
Query:  152 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            MAAR+ GL+ALFDVDGTLTAPRK  TP+ML FM+ELRKVVTVGVVGGSDL KISEQLG TV ++YDYVFSENGLVAHK+GKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY D FNE HFFGDKTYKGGNDHEI+ES+R V
Sbjct:    1 MAARRPGLIALFDVDGTLTAPRKVVTPEMLTFMQELRKVVTVGVVGGSDLIKISEQLGSTVTNDYDYVFSENGLVAHKEGKLIGTQSLKSFLGEEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTV 226          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_TOBAC (Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 5.257e-114
Identity = 199/226 (88.05%), Postives = 212/226 (93.81%), Query Frame = 2
Query:  152 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            MAARK GL+ALFDVDGTLTAPRK  TP+ML+FM+ELRKVVTVGVVGGSDL KISEQLGKTV  +YDY FSENGLVAHKDGKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGR+CSQEERDEFE+YDK+H IR  MVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY ++FNE HFFGDKTYKGGNDHEI+ES+R V
Sbjct:    1 MAARKPGLIALFDVDGTLTAPRKEVTPEMLKFMKELRKVVTVGVVGGSDLVKISEQLGKTVTTDYDYCFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRDCSQEERDEFEKYDKVHKIRQTMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTV 226          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_SOLLC (Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 2.884e-112
Identity = 197/226 (87.17%), Postives = 210/226 (92.92%), Query Frame = 2
Query:  152 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            MAARK GL+ALFDVDGTLTAPRK +TPQML+FM+ELRKVVTVGVVGGSDL KISEQLG TV ++YDYVFSENGLVAHKDGKLIG QSLKS LG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+  IR  MVSVLREKFAH NLTFSIGGQISFDVFPQGWDKTYCLRY ++FNE HFFGDKTYKGGNDHEI+ES+R V
Sbjct:    1 MAARKAGLIALFDVDGTLTAPRKESTPQMLKFMQELRKVVTVGVVGGSDLVKISEQLGNTVTNDYDYVFSENGLVAHKDGKLIGKQSLKSHLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQKIRETMVSVLREKFAHFNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTV 226          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_WHEAT (Phosphomannomutase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 1.870e-111
Identity = 194/226 (85.84%), Postives = 212/226 (93.81%), Query Frame = 2
Query:  155 AARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            AARK  G+LALFDVDGTLTAPRK  TP+MLEFM+ LR+ VTVGVVGGSDL KISEQLGK+VI +YDYVFSENGLVAHKDGKLIGTQSLK++LG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGM+N+SPIGRNCSQEERD+FE+YDK+HN+RPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY ++F E HFFGDKTYKGGNDHEIFES R V
Sbjct:    3 AARKDAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFKEIHFFGDKTYKGGNDHEIFESDRTV 228          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_ORYSJ (Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2)

HSP 1 Score: 399.053 bits (1024), Expect = 2.067e-110
Identity = 193/227 (85.02%), Postives = 212/227 (93.39%), Query Frame = 2
Query:  152 MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK+V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY ++F E HFFGDKTYKGGND+EIFES R +
Sbjct:    1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTI 227          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_ORYSI (Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 2.067e-110
Identity = 193/227 (85.02%), Postives = 212/227 (93.39%), Query Frame = 2
Query:  152 MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK+V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY ++F E HFFGDKTYKGGND+EIFES R +
Sbjct:    1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDYEIFESDRTI 227          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_ARATH (Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 6.224e-107
Identity = 184/226 (81.42%), Postives = 209/226 (92.48%), Query Frame = 2
Query:  152 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            MAA+  G++ALFDVDGTLTAPRK ATP++L+F+RELRKVVT+GVVGGSDLSKISEQLGKTV ++YDY FSENGLVAHKDGK IG QSLK  LG +KLKE INFTLHYIADLDIPIKRGTFIEFR+GMLN+SPIGRNCSQEERDEFERYDK+ NIRPKMV+ LRE+FAHLNLTFSIGGQISFDVFP+GWDKTYCL+Y +DF+E HFFGDKTY+GGND+EI+ES + +
Sbjct:    1 MAAKIPGVIALFDVDGTLTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKTVTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQISFDVFPKGWDKTYCLQYLEDFSEIHFFGDKTYEGGNDYEIYESPKTI 226          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM1_DICDI (Phosphomannomutase 1 OS=Dictyostelium discoideum GN=pmmA PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 5.866e-81
Identity = 142/218 (65.14%), Postives = 174/218 (79.82%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQR 823
            + LFDVDGTLT PR   TP+M +F+  LR  V +GVVGGSD++KI EQLG+  I+E+ Y+F+ENGL++ KDG L+ TQ +K FLG E +K+FINF LHYIADLDIPIKRGTF+EFR+GM+NISPIGRNCSQ+ER+EFE+YD  H IRP MVS+L+EKF  L L +SIGGQISFDVFP GWDKTYCLR+   D +   +FFGDKT+ GGND+EI    R
Sbjct:    8 ICLFDVDGTLTKPRNVITPEMKDFLAGLRTKVELGVVGGSDINKIKEQLGENCINEFHYLFAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGTFVEFRNGMINISPIGRNCSQQEREEFEKYDLEHKIRPTMVSILKEKFQSLGLQYSIGGQISFDVFPIGWDKTYCLRHLPEDKYKTIYFFGDKTFVGGNDYEIANDPR 225          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM2_DICDI (Phosphomannomutase 2 OS=Dictyostelium discoideum GN=pmmB PE=3 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 2.725e-78
Identity = 137/224 (61.16%), Postives = 174/224 (77.68%), Query Frame = 2
Query:  158 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQR 823
            ++ +  + LFDVD TLT PR A T +M E +  LR  + +GVVGGS+ +KI EQLG+  I+++DYVF+ENGL+A+KDG L+  Q +K +LG E +K+FINF LHY+ADLDIPIKRGTF+EFR+GMLNISPIGRNCSQ+ER+EFE+YD  H IR  MVS+L+E+F    L +SIGGQISFDVFP GWDKTYCLR+   D+F   +FFGDKT+ GGND+EI    R
Sbjct:    2 SQNKNTICLFDVDDTLTKPRNAITNEMKELLASLRTKIKIGVVGGSNFNKIKEQLGENFINDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGTFVEFRNGMLNISPIGRNCSQQEREEFEKYDLEHKIRSTMVSILKEEFKSFGLQYSIGGQISFDVFPIGWDKTYCLRHLPEDEFKTLYFFGDKTFLGGNDYEIANHPR 225          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_SCHPO (Phosphomannomutase OS=Schizosaccharomyces pombe GN=pmm1 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.145e-76
Identity = 141/223 (63.23%), Postives = 173/223 (77.58%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQL---GKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            L LFDVDGTLT  R + +P+MLE ++ LRKVV +G VGGSDLSK  EQL   G+ VID +DY F+ENGL A++ G+ + +QS  ++LG EK ++ +NF LHYIADLDIP+KRGTFIEFR+GM+NISP+GRN + EER+EFER+DK   IR  MV VLREKF    LTFSIGGQISFDVFP GWDKTYCL++   + F+  HFFGDKTYKGGND+EIF   R +
Sbjct:   15 LVLFDVDGTLTPARLSVSPEMLETLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVIDSFDYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQISFDVFPAGWDKTYCLQHVEKEGFDTIHFFGDKTYKGGNDYEIFVDPRTI 237          
The following BLAST results are available for this feature:
BLAST of DY260098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM_SOYBN4.300e-11689.38Phosphomannomutase OS=Glycine max PE=2 SV=1[more]
PMM_TOBAC5.257e-11488.05Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1[more]
PMM_SOLLC2.884e-11287.17Phosphomannomutase OS=Solanum lycopersicum PE=2 SV... [more]
PMM_WHEAT1.870e-11185.84Phosphomannomutase OS=Triticum aestivum PE=2 SV=1[more]
PMM_ORYSJ2.067e-11085.02Phosphomannomutase OS=Oryza sativa subsp. japonica... [more]
PMM_ORYSI2.067e-11085.02Phosphomannomutase OS=Oryza sativa subsp. indica G... [more]
PMM_ARATH6.224e-10781.42Phosphomannomutase OS=Arabidopsis thaliana GN=PMM ... [more]
PMM1_DICDI5.866e-8165.14Phosphomannomutase 1 OS=Dictyostelium discoideum G... [more]
PMM2_DICDI2.725e-7861.16Phosphomannomutase 2 OS=Dictyostelium discoideum G... [more]
PMM_SCHPO1.145e-7663.23Phosphomannomutase OS=Schizosaccharomyces pombe GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260098 ID=DY260098; Name=DY260098; organism=Citrus clementina; type=EST; length=971bp
CAATTACTTCCCCGTAACTTCCCAGCTTCCGCCATTCAAGATTTCAAGAT
CAAGATCTGCTTTAAATTCCGCGTCCAAATTCAAAGCTCTGCCCTCCACT
CCCGCTATTCCTTCCCTTCTATTCCGATAAATCCATACATTTCAAACTCC
AATGGCTGCTAGGAAGCAAGGTTTATTAGCTCTCTTTGATGTTGACGGAA
CTCTCACGGCTCCGAGAAAGGCGGCAACACCACAAATGTTAGAGTTCATG
CGGGAACTGAGAAAGGTTGTTACAGTTGGAGTCGTCGGTGGATCTGATCT
TTCTAAGATATCAGAGCAGCTTGGGAAGACAGTTATTGATGAATACGATT
ATGTGTTTTCTGAGAATGGTCTTGTGGCTCATAAGGATGGGAAATTAATT
GGCACACAGAGCTTGAAATCATTTCTTGGAGGCGAAAAGCTCAAGGAATT
CATAAATTTTACTCTTCATTACATTGCTGACTTGGACATTCCAATTAAAA
GGGGAACTTTCATTGAATTCCGAAGTGGGATGCTTAATATTTCACCAATT
GGGCGAAACTGCAGCCAAGAAGAAAGGGACGAGTTTGAGAGGTATGACAA
GATTCACAATATACGGCCAAAAATGGTATCTGTGCTTCGGGAGAAGTTTG
CTCACCTTAACTTGACATTTTCCATTGGAGGACAGATAAGCTTTGATGTG
TTTCCCCAGGGATGGGACAAGACATACTGCTTGAGATACCCTGATGACTT
CAATGAAACCCACTTTTTTGGGGACAAAACCTACAAGGGAGGGAATGATC
ATGAAATTTTTGAATCCCAGCGACCAGTGGGTCCACACAGTTACCCCCCC
TGAGGATACTATGGAAAAATGTAAGGCTCCCTCCCCGGCTAAACCCTGGA
ATTTGGGAAAAATTATAATAGTCCACCAAACCCCAAAAAAAAATTTCCTA
TTTCTAATGCCAACCAATTCA
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