DY260109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.733e-18 Identity = 45/62 (72.58%), Postives = 58/62 (93.55%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MKVIAAY LAVLGGN +P+ADD+++IL SVGAEAD+E++EFLL+E+K KDITE+IA+GRE+L Sbjct: 1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERL 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.263e-18 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFNLFD 401 MKVIAA+ LA+LGGN +P+ +DL++IL SVGA+ADD++IE LLS+VKGKDITELIASGRE+L D+++GF+LFD Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERLASVPSGGGVAVAAAAGGGGGDAPAAAAEEPKKEEKSEEESDEELGFSLFD 112
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.123e-17 Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFNLFD 401 MK +AAY LAVL GNA+PSADDL IL SVG E D+E++E LLS++ GKDITELIA+GREK DDDMGF+LFD Sbjct: 1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.123e-17 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MKV AA+ LAVLGGNANPSAD++++I+G+VGA+ D E IE LL EV GKDI ELIASGREKL Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.118e-16 Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MKV+AAY LAVL G A+P++ D++ ILGSVGAE +D +IE LL EVKGKD+ ELIA+GREKL Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 4.718e-16 Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MKV+AA+ LAVL G A+P+ D+++ILGSVGAE +D +IE LL EVKGKD+ ELIA+GREKL Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.342e-15 Identity = 39/62 (62.90%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 M+ +AAY LAVLGGNANPSA D++ ILGSVG +A+DER+ ++ E+KGKDI E++A+GR KL Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKL 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA23_ARATH (60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana GN=RPP2C PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.533e-14 Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MKVIAA+ LA LGGN NP+++DL+ IL SVGAE D+ +I+ L S +K D+TELIA+GREK+ Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGREKM 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA2_ALTAL (60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.883e-13 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MK +AAY L LGGN +PSA D++ +L SVG EAD +R++ L+SE++GKDI ELIASG EKL Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKL 62
BLAST of DY260109 vs. ExPASy Swiss-Prot
Match: RLA25_ARATH (60S acidic ribosomal protein P2-5 OS=Arabidopsis thaliana GN=RPP2E PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.883e-13 Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 3 Query: 66 MKVIAAYFLAVLGGNANPSADDLQNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 251 MKV+AAY LA L GN NPS DL+ I+ SVGAE D E+I+ S +K +D+TELIA GREK+ Sbjct: 1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGREKM 62 The following BLAST results are available for this feature:
BLAST of DY260109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260109 ID=DY260109; Name=DY260109; organism=Citrus clementina; type=EST; length=1113bpback to top |