DY260114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.733e-24 Identity = 78/166 (46.99%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 103 MTGKDFECVSLGHAEKITVSKDQTVILLC---KACIGHEKLLQWRFTMEN-LQDFPEESC----TKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 M ++FE LG +K+TVSKD TVIL K I E+ Q R +EN D+ +E K S AV+K+ G+++AEV EKKDR E G+V ++LLYA KELDKLQTAN QKIGVQ IQ AL+ V IA +AGV+G+ VV KLLE Sbjct: 340 MNLENFEPHMLGTCKKVTVSKDDTVILDGAGDKKSI-EERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLE 504 HSP 2 Score: 39.2762 bits (90), Expect = 1.733e-24 Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K C +K PGFGE+RKA+L+D+A T Sbjct: 297 INKLRAGIKVCAVKAPGFGENRKANLQDLAILT 329
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.418e-24 Identity = 72/163 (44.17%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVIL-----------LCKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEGSKP 576 LG +KIT+SKD TVIL C+ +L + E LQ E K S AV+K+ G+++AEV EKKDR E G+V ++LLYA KELDKL TAN QKIGVQ IQ AL+ V IA +AGV+G+ VV KLLE P Sbjct: 348 LGSCKKITISKDDTVILDGAGDKKSIEERCEQIRSAIELSTSDYDKEKLQ----ERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNP 506 HSP 2 Score: 40.4318 bits (93), Expect = 8.418e-24 Identity = 19/36 (52.78%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 LN + K C IK PGFGE+RKA L D+A T Q Sbjct: 295 LNKLRAGIKVCAIKAPGFGENRKAGLHDLAVLTGGQ 330
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.095e-23 Identity = 75/156 (48.08%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLC---KACIGHEKLLQWRFTMEN-LQDFPEESC----TKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 LG +K+TVSKD TVIL K I E+ Q R +EN D+ +E K S AV+K+ G+++AEV EKKDR E G+V ++LLYA KELDKLQTAN QKIGVQ IQ AL+ V IA +AGV+G+ VV KLLE Sbjct: 350 LGSCKKVTVSKDDTVILDGAGDKKSI-EERADQIRSAVENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLE 504 HSP 2 Score: 39.2762 bits (90), Expect = 1.095e-23 Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K C +K PGFGE+RKA+L+D+A T Sbjct: 297 INKLRAGIKVCAVKAPGFGENRKANLQDLAILT 329
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.425e-23 Identity = 71/162 (43.83%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRF----------TMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEGSKP 576 LG +KIT+SKD TVIL G +K ++ R T + ++ +E K S AV+K+ G+++AEV EKKDR E G+V ++LLYA KELDKL TAN QKIGVQ IQ AL+ V IA +AGV+G+ VV KLLE P Sbjct: 348 LGSCKKITISKDDTVIL---DGAGDKKAIEERCDQIRSGIEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDDP 506 HSP 2 Score: 40.817 bits (94), Expect = 1.425e-23 Identity = 19/36 (52.78%), Postives = 23/36 (63.89%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 LN + K C IK PGFGE+RKA L+D+A T Q Sbjct: 295 LNKLRAGIKVCAIKAPGFGENRKAGLQDLAVLTGGQ 330
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.314e-23 Identity = 73/161 (45.34%), Postives = 93/161 (57.76%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLC----KACIGHEKLLQWRFTMENLQ-DFPEESC----TKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSV-VSKLLEGSKP 576 LG+ +KITVSKD TV L K IG E+ Q R +E + D+ +E K S AV+K+ G++++EV EKKDR E G+V ++LLYA KELDKL TAN KIGVQ IQ AL+ V IA +AGV+G+V V KLLE P Sbjct: 350 LGNCKKITVSKDDTVFLGWGAGDKKAIG-ERCEQIRSMVEASESDYDKEKLQERLAKLSGGVAVLKIGGASESEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDHKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLESDNP 509 HSP 2 Score: 40.0466 bits (92), Expect = 5.314e-23 Identity = 17/36 (47.22%), Postives = 23/36 (63.89%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 LN + K C +K PGFGE+RKA++ D+A T Q Sbjct: 297 LNKLRAGIKVCAVKAPGFGENRKANMHDLATLTGAQ 332
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.915e-23 Identity = 71/159 (44.65%), Postives = 93/159 (58.49%), Query Frame = 1 Query: 136 GHAEKITVSKDQTVILLC---KACIGHEKLLQWRFTME-NLQDFPEESC----TKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEGSKP 576 G+ +K+TVSKD TV+L K IG E+ Q R +E + D+ +E K S AV+K+ G+++ EV EKKDR E G+V ++LLYA KEL+KL TAN QKIGVQ IQ AL+ V IA +AGV+G+ VV KLLE P Sbjct: 349 GNCKKVTVSKDDTVVLDGAGDKQAIG-ERCEQIRSMVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVVVGKLLEQDNP 506 HSP 2 Score: 40.0466 bits (92), Expect = 6.915e-23 Identity = 18/36 (50.00%), Postives = 23/36 (63.89%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 LN + K C +K PGFGE+RKA+L D+A T Q Sbjct: 295 LNKLRANIKVCAVKAPGFGENRKANLHDLAALTGAQ 330
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.171e-22 Identity = 69/163 (42.33%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVIL-----------LCKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSV-VSKLLEGSKP 576 LG +K+TVSKD TVIL C+ +L + E LQ E K S AV+K+ G+++AEV EKKDR E G++ ++LLYA +EL+KL TAN QKIGVQ IQ AL+ V IA +AGV+G+V V KLLE P Sbjct: 347 LGTCKKVTVSKDDTVILDGAGDKKGIEERCEQIRSAIELSTSDYDKEKLQ----ERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGILPGGGVALLYAARELEKLPTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLEQDNP 505 HSP 2 Score: 41.2022 bits (95), Expect = 1.171e-22 Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 LN + K C IK PGFGE+RKA+L+D+A T Sbjct: 294 LNKLRAGIKVCAIKAPGFGENRKANLQDLAALT 326
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.538e-20 Identity = 63/158 (39.87%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRF----------TMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 LG A+K+TV++D T+IL G +KL++ R T Q+ +E +K S AV KV G++++EV E+KDR E G++ ++LLYA K LD LQT N Q+ GVQ +Q AL+ IA +AG DGS VV KLLE Sbjct: 347 LGTAKKVTVTRDDTIILHGG---GDKKLIEERCEELRSANEKSTSTFDQEKTQERLSKLSGGVAVFKVGGASESEVGERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLQTENEDQRRGVQIVQNALKAPAFTIAANAGYDGSLVVGKLLE 501 HSP 2 Score: 37.3502 bits (85), Expect = 1.538e-20 Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 26 KACVIKPPGFGESRKASLRDIAKFT 100 K C IK PGFG++RKASL D+A T Sbjct: 302 KVCAIKAPGFGDNRKASLDDLAVLT 326 HSP 3 Score: 25.7942 bits (55), Expect = 1.538e-20 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 2 Query: 584 SVKVKNADMLMPEIVFPLKTIRAVLVEATSEML 682 + K K DM+ I+ P+K IR L +A S L Sbjct: 511 AAKGKYVDMVKAGIIDPVKVIRTALTDAASVSL 543
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.007e-16 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILL---CKACIGHEKLLQWRFTMENL-----QDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVVSV--MSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVVS-KLLEGS 570 LG A+ +T++KD T I+ KA I + Q R T+E+ ++ +E K S AVI+V G+++ EV+EKKDR E G+++ ++LL+A K LD L AN QK+G++ ++ AL+ V IA +AGVDG+VV+ KLLE S Sbjct: 317 LGTAKTVTITKDNTTIVDGAGVKADID-ARCAQIRATIEDTTSDYDREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALLHAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESS 473 HSP 2 Score: 31.9574 bits (71), Expect = 1.007e-16 Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L DIA T Q Sbjct: 264 VNRLRGGLKVASVKAPGFGDRRKAMLEDIAILTGGQ 299
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.306e-16 Identity = 57/160 (35.62%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM--ENLQDFP--------EESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVVSV--MSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVVS-KLLEGS 570 LG A+K+T++K++T ++ G +K ++ R + N++D +E K + AVIKV G+ + EV+EKKDR E GVV+ ++LL+A + LD ++ AN Q +G++ ++ AL+ V IA +AGVDG+VV+ KLLE S Sbjct: 317 LGTAKKVTITKEETTLV---DGAGDKKDIEARCSQIRANIEDTSSDYDREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEGVVAGGGVALLHAIRSLDSVKGANPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENS 473 HSP 2 Score: 32.7278 bits (73), Expect = 6.306e-16 Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L DIA T Q Sbjct: 264 VNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQ 299 The following BLAST results are available for this feature:
BLAST of DY260114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260114 ID=DY260114; Name=DY260114; organism=Citrus clementina; type=EST; length=980bpback to top |