DY260127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_USTMA (Mitochondrial Rho GTPase 1 OS=Ustilago maydis GN=GEM1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.034e-50 Identity = 99/203 (48.77%), Postives = 136/203 (67.00%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLR-GDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KS+LI + E+ KV V P LPP+ P+ V I+DTSSS E++ L EL+RA+ + + Y+ + S+ R+ +YWLP +R L + VP+I+ G K+DLR GD +LE+ + P+M +F+E+ETCVECSA + V +VFY+AQKAVL+PTAPL+D E LKP C ALKRIF +CD D DG L+D ELN+F K F Sbjct: 17 KSTLITSLVKEAYVAKVQKVVPPITLPPEVAPEAVVTKIVDTSSSPEHRANLEAELRRANVICIVYSISAPSSFDRIPTYWLPYIRSLGVNVPVILVGNKIDLRSGDVTNAALEDELAPVMAEFKEVETCVECSARIPLNVSEVFYFAQKAVLYPTAPLYDSREHVLKPACVDALKRIFRLCDSDKDGLLSDGELNDFQRKCF 219
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: GEM1_CRYNE (Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans GN=GEM1 PE=3 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.708e-45 Identity = 95/203 (46.80%), Postives = 127/203 (62.56%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATS-LEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF 788 KSS+I + E+ VP V +PP+ P+ +I+DTSS+ ++ L + RA + L Y+ S+ R++ YWLP RR I VP+I+ G K+DLRG LE+ PIM++F+E+ET VECSA + V +VFY+AQKAVLHPTAPL+D E TLKP+C +ALKRIF I D D DG LN ELN+F K F Sbjct: 19 KSSIITSLIKEAFVTNVPHVVPEVTIPPEITPENFTTSIVDTSSNPRSRPHLLSSISRAHVICLVYSIADPSSFDRVAEYWLPLFRREGINVPVILVGNKIDLRGGRVTNQGLEDESAPIMREFKEVETVVECSALLPLNVSEVFYFAQKAVLHPTAPLYDSREHTLKPKCLEALKRIFTISDVDKDGLLNAHELNQFQQKCF 221
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO1_MOUSE (Mitochondrial Rho GTPase 1 OS=Mus musculus GN=Rhot1 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.887e-43 Identity = 99/242 (40.91%), Postives = 147/242 (60.74%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E PE+VPP +P D P+RVP I+D S + ++ +L++E+ +A+ + + YA N + ++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG LNDAELN F F + P + V +K +G GLTLR F F Sbjct: 30 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDV-KNVVRKHLSDGVADSGLTLRGFLF 266 HSP 2 Score: 22.3274 bits (46), Expect = 1.887e-43 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L GFLF LF+++G Sbjct: 259 LTLRGFLFLHTLFIQRG 275
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO1_HUMAN (Mitochondrial Rho GTPase 1 OS=Homo sapiens GN=RHOT1 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.205e-43 Identity = 98/242 (40.50%), Postives = 147/242 (60.74%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E PE+VPP +P D P+RVP I+D S + ++ +L++E+ +A+ + + YA N + ++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG LNDAELN F F + P + V +K +G GLTL+ F F Sbjct: 17 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDV-KNVVRKHISDGVADSGLTLKGFLF 253 HSP 2 Score: 22.7126 bits (47), Expect = 3.205e-43 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L GFLF LF+++G Sbjct: 246 LTLKGFLFLHTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO1_BOVIN (Mitochondrial Rho GTPase 1 OS=Bos taurus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.440e-43 Identity = 98/242 (40.50%), Postives = 147/242 (60.74%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E PE+VPP +P D P+RVP I+D S + ++ +L++E+ +A+ + + YA N + ++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG LNDAELN F F + P + V +K +G GLTL+ F F Sbjct: 30 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDV-KNVVRKHISDGVADGGLTLKGFLF 266 HSP 2 Score: 22.7126 bits (47), Expect = 5.440e-43 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L GFLF LF+++G Sbjct: 259 LTLKGFLFLHTLFIQRG 275
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO1_CHICK (Mitochondrial Rho GTPase 1 OS=Gallus gallus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.441e-43 Identity = 99/242 (40.91%), Postives = 146/242 (60.33%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E PE+VPP +P D P+RVP I+D S + +N +L E+ +A+ + + YA N ++++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG LNDAELN F F + P + V +K+ +G GLTL+ F F Sbjct: 17 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQNDEQLYHEISQANVICIVYAVNNKNSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNRSELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFRISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDV-KNVVRKNVSDGVADNGLTLKGFLF 253 HSP 2 Score: 22.7126 bits (47), Expect = 5.441e-43 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L L GFLF LF+++G Sbjct: 246 LTLKGFLFLHTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO1_DANRE (Mitochondrial Rho GTPase 1-A OS=Danio rerio GN=rhot1a PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.091e-43 Identity = 97/242 (40.08%), Postives = 149/242 (61.57%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + +E P++VPP +P D P+RVP I+D S + ++ +L +E+ +A+ + + Y+ N + ++ +++S+W+P E + +VP+I+ G K DL +H+ S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG LND ELN F F + P + V +K+ +G GLTL+ F F Sbjct: 17 KTSLIMSLVSEEFPDEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLYQEITKANVICIVYSVNNKKSIEKVTSHWIPLINERTDKDSRVPLILVGNKSDLV-EHS--SMETIL-PIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYSPEEKEMKPSCIKALTRIFKISDLDNDGILNDNELNFFQRTCFNIPLAPQALEDV-KNVVRKNMTDGVKDNGLTLKGFLF 253 HSP 2 Score: 23.0978 bits (48), Expect = 7.091e-43 Identity = 19/55 (34.55%), Postives = 27/55 (49.09%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKGPP*NTLGLSRKNFG*GEII*N*GEVFFSRFQTYPPPPD 1041 L L GFLF LF+++G T + R+ FG + + E F F+ PPD Sbjct: 246 LTLKGFLFLHTLFIQRGRHETTWTVLRR-FGYDDDLELTQEYLFPLFKI---PPD 296
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_HUMAN (Mitochondrial Rho GTPase 2 OS=Homo sapiens GN=RHOT2 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 9.240e-43 Identity = 91/211 (43.13%), Postives = 133/211 (63.03%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEI---KVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITP 806 K+SLI + E PE+VPP +P D P++VP I+D S + + +L EE+ +A+ V + Y ++++T+ ++ + W+P + +VPII+ G K DLR + +S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D D+D AL+D ELN F F + P Sbjct: 17 KTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTDEELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSDLR---SGSSMEAVL-PIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAP 223 HSP 2 Score: 25.409 bits (54), Expect = 9.240e-43 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L LDGFLF LF+++G Sbjct: 246 LTLDGFLFLNTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_PIG (Mitochondrial Rho GTPase 2 OS=Sus scrofa GN=RHOT2 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.204e-42 Identity = 92/211 (43.60%), Postives = 132/211 (62.56%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITP 806 K+SLI + E PE+VPP +P D P++VP I+D S + + +L +E+++A V + Y ++++T+ ++ + W+P + R +VPII+ G K DLR S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D DMD AL+D ELN F F + P Sbjct: 17 KTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTAEELQDEIQKASVVCVVYDVSEETTVEKIRTKWIPLVNGGTRRGPRVPIILVGNKSDLRP---GGSMEAVL-PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMDQALSDQELNAFQTCCFGHPLAP 223 HSP 2 Score: 25.409 bits (54), Expect = 1.204e-42 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKG 927 L LDGFLF LF+++G Sbjct: 246 LTLDGFLFLNTLFIQRG 262
BLAST of DY260127 vs. ExPASy Swiss-Prot
Match: MIRO2_DANRE (Mitochondrial Rho GTPase 2 OS=Danio rerio GN=rhot2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.523e-42 Identity = 100/242 (41.32%), Postives = 142/242 (58.68%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDGALNDAELNEFPVKWF*CSITPW*NSKA*RGVYQKSTMEGSMALGLTLRWFPF 899 K+SLI + E PE+VP +P D P++VP I+D S + + L EE+ +A+ V + Y Q+ T+ ++ + W+P + K+PII+ G K DLR + +S+E ++ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +++ LK +C +AL RIF I D D D L+DAELN F F + P + V K+T +G GLTL F F Sbjct: 17 KTSLIMSLVGEEFPEQVPLRAEEITIPADVTPEKVPTHIVDYSENEQTDEVLREEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSDLR---SGSSMETIL-PIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEDKQLKAQCVRALSRIFSISDQDNDHILSDAELNCFQKLCFGNPLAPQALEDV-KTVVWKNTSDGVQDNGLTLNGFLF 253 HSP 2 Score: 24.6386 bits (52), Expect = 4.523e-42 Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 877 LPLDGFLFPQALFLEKGPP*NTLGLSRK 960 L L+GFLF LF+++G T + RK Sbjct: 246 LTLNGFLFLNTLFIQRGRHETTWTILRK 273 The following BLAST results are available for this feature:
BLAST of DY260127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260127 ID=DY260127; Name=DY260127; organism=Citrus clementina; type=EST; length=1141bpback to top |