DY260134

Overview
NameDY260134
Unique NameDY260134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1183
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1427 contig Ccv1_Contig1427:1..1183. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY260134 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 4.146e-58
Identity = 112/299 (37.46%), Postives = 175/299 (58.53%), Query Frame = 1 
Query:    4 ILAFACAW-WMLLNWVWLKPKKLEKFLRKQGFSGNSYKVFYGDMKELAQTTKEAKSRPISLSDDIARRILPFHYHIITNFGKNSFIWMGPRPNLNITDPKMIREIFLKHDIFKK---LRSPLAKLLITGMVGYDGEQWFKVRKIATPAFHHDKLKNMLPTIHKSCNDMLRKWEMSFSKDESCELDVWPHIQTLTADVISPTAFGSNFEKGRKIFEVLSEQFNLVTQASLFAYIPRWEFVPNKLNRNLNPTTMKRENW*KVSLTKKREPLKLENPPKWGPFGVYWWNQSQKNSGKGNRKE 888
            I A   AW W +L+W W  PK++EK LR+QGF GN Y+   GD+KE  +  +EA S+P+  ++DI  R++P   H I  +G+NSF WMG  P +++ +P++I+E+      ++K   + +PL K L+TG+  ++G +W K R+I +PAF  +KLK+MLP      +DML KWE    K  S E+D++P    LT+DVIS  AFGS +E+G KIF +L E  +L        YIP W ++P K N+ +     +  +  +  + K+ + LK   P +    GV   +  Q+   +GN+K+
Sbjct:   16 IFALVMAWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSKPMEFNNDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAFAICYHDMLTKWEKIAEKQGSHEVDIFPTFDVLTSDVISKVAFGSTYEEGGKIFRLLKELMDLTIDCMRDVYIPGWSYLPTKRNKRMKEINKEITDMLRFIINKRMKALKAGEPGEDDLLGVLLESNIQEIQKQGNKKD 314
The following BLAST results are available for this feature:
BLAST of DY260134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO4.146e-5837.46Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP11YG19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260134 ID=DY260134; Name=DY260134; organism=Citrus clementina; type=EST; length=1183bp
GCTATTCTAGCCTTTGCATGTGCCTGGTGGATGCTACTGAATTGGGTATG
GCTAAAACCAAAGAAGCTAGAAAAGTTCCTCAGAAAGCAAGGATTCTCCG
GAAACTCCTACAAAGTATTTTACGGAGACATGAAAGAGCTTGCCCAGACC
ACTAAAGAAGCTAAAAGCAGACCCATCAGCCTCTCCGACGATATCGCCCG
GCGAATTCTGCCTTTCCACTATCATATCATCACCAATTTTGGTAAGAATT
CCTTCATATGGATGGGTCCAAGACCAAACTTAAACATCACAGACCCTAAG
ATGATAAGGGAAATCTTTTTGAAGCATGATATCTTTAAAAAGCTGAGAAG
CCCACTTGCGAAGTTGCTGATCACTGGGATGGTAGGCTATGATGGTGAAC
AGTGGTTTAAAGTTAGAAAAATCGCCACTCCAGCTTTCCATCATGATAAG
TTGAAGAATATGTTACCTACAATTCATAAGAGCTGTAACGACATGCTAAG
GAAATGGGAGATGTCGTTTTCAAAGGATGAGTCCTGTGAGTTAGATGTGT
GGCCTCATATTCAAACTTTGACAGCGGATGTGATTTCTCCAACAGCATTC
GGCAGTAACTTTGAAAAAGGAAGAAAAATATTTGAAGTCCTAAGCGAACA
ATTTAACCTTGTAACTCAAGCTTCCTTGTTTGCTTATATTCCAAGATGGG
AGTTTGTGCCTAATAAACTGAACAGAAATTTGAACCCCACCACAATGAAA
AGGGAAAACTGGTAAAAGGTATCCTTAACAAAAAAAAGGGAACCCCTGAA
GTTGGAAAACCCCCCAAAATGGGGACCTTTTGGGGTATATTGGTGGAACC
AATCCCAAAAAAATTCCGGGAAAGGAAACCGGAAAGAGTTTTTAAAAAGG
TATTGAAAAAGGGCCGCCCTTTTTTTCCCTGTTGGGGAAAGAAACCAATC
GGTCCCTTGGCTTGGGGGGGACAAAGGTTTTTTTTTTCCCCAAACCCCCC
GAAAGGGGAAAAAAAAAAAACAAGGGAAAAAGGTTTTTTTCACTTTTTTT
AGAAAAAAAAAAAAACAAAAATTTTCAAAAAACTAAAAACCCCTTTTATA
AAAAAATAAAAACCACCAATTTCTTCTCCACAAAGAGGATGCTGGGGGGT
TTTATCTCTCCCCCCCACCCCCCCCTCCCCCCC
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