DY260155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.685e-97 Identity = 130/153 (84.97%), Postives = 139/153 (90.85%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFLK 475 EKFARYF GYYVM+P KAVE+VDENTICVAAILGSTLTGEFEDVKLL +LLTKKN+ETGW+TPIHVDAASGGFIAPFL+PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV+WR+K+DLPDELVFHINYLGSDQPTFTLNF K Sbjct: 169 EKFARYFEVELKEVKLKEGYYVMDPAKAVEIVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWETPIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPDELVFHINYLGSDQPTFTLNFSK 321 HSP 2 Score: 103.219 bits (256), Expect = 3.685e-97 Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLSSLFF*RTATPPPVFEISEGWKKFGWIVP 728 SKGS QIIAQYYQ IRLGFEGYKN+M+NC+ NA+ EG+ GRF+I+SKDVG + + F R ++ VFE+SE ++FGWIVP Sbjct: 320 SKGSYQIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVA-FSLRDSSKYTVFEVSEHLRRFGWIVP 404
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 1.169e-95 Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFLK 475 EKFARYF GYYVM+P KAVE+VDENTICVAAILGSTL GEFEDVK L DLL +KN+ETGWDTPIHVDAASGGFIAPF+YP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWVVWR KDDLPDEL+FHINYLG+DQPTFTLNF K Sbjct: 168 EKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKDDLPDELIFHINYLGADQPTFTLNFSK 320 HSP 2 Score: 104.375 bits (259), Expect = 1.169e-95 Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLSSLFF*RTATPPPVFEISEGWKKFGWIVP 728 SKGSSQ+IAQYYQ IRLG+EGYKN+MENC NA REGLE TGRF I+SK++G L + F + FEISE ++FGWIVP Sbjct: 319 SKGSSQVIAQYYQLIRLGYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVA-FSLKDNRQHNEFEISETLRRFGWIVP 403
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 265.388 bits (677), Expect = 1.676e-91 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFLK 475 EKFARYF GYYVM+P +AV++VDENTICVAAILGSTL GEFEDVKLL DLL +KN+ETGWDTPIHVDAASGGFIAPFLYP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR K+DLP+EL+FHINYLG+DQPTFTLNF K Sbjct: 168 EKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSK 320 HSP 2 Score: 93.5893 bits (231), Expect = 1.676e-91 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLSSLFF*RTATPPPVFEISEGWKKFGWIVP 728 SKGSSQ+IAQYYQ IRLG EGY+N+MENC N REGLE T RF I+SKD G L + F + ++ FEIS+ +++GWIVP Sbjct: 319 SKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVA-FSLKDSSCHTEFEISDMLRRYGWIVP 403
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.853e-91 Identity = 123/153 (80.39%), Postives = 133/153 (86.93%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFLK 475 EKFARYF GYYVM+P KA E+VDENTICVAAILGSTL GEFEDVK L DLL KKNEETGW+TPIHVDAASGGFIAPF+YP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWVVWR +DLP+EL+FHINYLG+DQPTFTLNF K Sbjct: 167 EKFARYFEVELKEVNLSEGYYVMDPDKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSK 319 HSP 2 Score: 95.9005 bits (237), Expect = 2.853e-91 Identity = 51/86 (59.30%), Postives = 62/86 (72.09%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLSSLFF*RTATPPPVFEISEGWKKFGWIVP 728 SKGSSQIIAQYYQ IRLGFEGYKN+MENC+ N +EG+E T RF I+SKD G + + F + + FEISE ++FGWIVP Sbjct: 318 SKGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVA-FSLKDHSFHNEFEISEMLRRFGWIVP 402
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.534e-46 Identity = 85/150 (56.67%), Postives = 104/150 (69.33%), Query Frame = 2 Query: 20 KFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 KFA YF Y+M P +A++ DENTI V LG T T ++EDVK + + L K +ETG D PIHVDAASGGF+APFL P++ WDFRLP VKSIN SGHK+GL GVGWVVWR K+D+ +LVF +NYLG + PTF+LNF Sbjct: 166 KFALYFDIELREVPMEHDRYIMTPEEAIKRCDENTIGVIPTLGVTFTLQYEDVKGISEALDKFEKETGLDIPIHVDAASGGFVAPFLQPEIVWDFRLPRVKSINGSGHKFGLSPLGVGWVVWRGKNDIHKDLVFDVNYLGGNMPTFSLNF 315 HSP 2 Score: 35.039 bits (79), Expect = 1.534e-46 Identity = 20/85 (23.53%), Postives = 40/85 (47.06%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLSSLFF*RTATPPP--VFEISEGWKKFGW 719 S+ QI+ QYY F+R G GY + + C+ + + ++ G F+I+ G + + + +F++S+ + GW Sbjct: 316 SRPGGQIVCQYYNFLRHGRSGYTAVHQACLDHGIFISKQVKKHGIFDIVYDGTGALPGACWKLKKDAKVKFNLFDLSDRMRNRGW 400
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 5.767e-46 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 EKF Y+ + +N K ++ VDE TI V I+G T TG ++D+K L +L+ + N++T + IHVDAASGG APF+ P+LEWDFRL V SIN SGHKYGLVY GVGWV+WR K LP+EL+F ++YLG + PT +NF Sbjct: 168 EKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINF 318 HSP 2 Score: 48.9062 bits (115), Expect = 5.767e-46 Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILS 620 S +SQ+I QYY F+R GF+GYK I E A E +E TG FEI++ Sbjct: 319 SHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMYLAEEIEKTGMFEIMN 368
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.168e-45 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 EKF Y+ + +N K ++ VDE TI V I+G T TG ++D+K L +L+ + N++T + IHVDAASGG APF+ P+LEWDFRL V SIN SGHKYGLVY GVGWV+WR K LP+EL+F ++YLG + PT +NF Sbjct: 168 EKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINF 318 HSP 2 Score: 47.3654 bits (111), Expect = 2.168e-45 Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILS 620 S +SQ+I QYY F+R GF+GYK I E A + +E TG FEI++ Sbjct: 319 SHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMFLAKEIEKTGMFEIMN 368
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.063e-44 Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 20 KFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 KFA YF G YVMN + ++ VDENTI V LG T T ++EDV + + L K +E+G + PIHVDAASGGF+APF+ ++ WDFRLP VKSIN SGHK+GL GVGWVVWR K DL +LVF++NYLG + TF+LNF Sbjct: 164 KFALYFDIEIREIPMENGRYVMNSEEVLKRVDENTIGVIPTLGVTFTLQYEDVFSISNALDKFEKESGINIPIHVDAASGGFVAPFIQQEIIWDFRLPRVKSINASGHKFGLSPLGVGWVVWREKKDLHKDLVFNVNYLGGNMSTFSLNF 313 HSP 2 Score: 36.965 bits (84), Expect = 3.063e-44 Identity = 25/89 (28.09%), Postives = 39/89 (43.82%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILSKDVGRTLSSLFF*RTATPPP----VFEISEGWKKFGWIV 725 S+ QIIAQYY F+R G GY I + C + L+ G F+++ G + P ++++SE + GW V Sbjct: 314 SRPGGQIIAQYYNFLRHGRNGYTLIQDACAQQGIFIGKELKKMGIFDLIYDGTGALPGVCWTISKNLPSEPLFNLYDLSEKLRSRGWQV 402
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.625e-42 Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 EKF Y+ + +N + ++ VDE TI V ILG T TG ++D+ L + L + N +T + IHVDAASGGF PF+ PD+ WDFRL V SIN SGHKYGLVY G+GWV+W+ + LP+EL+F ++YLG + PT +NF Sbjct: 166 EKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINF 316 HSP 2 Score: 45.4394 bits (106), Expect = 1.625e-42 Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEI 614 S+ +S II QYY F+R GFEGY+ I + A+ +E TG F+I Sbjct: 317 SRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDI 364
BLAST of DY260155 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.625e-42 Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 2 Query: 17 EKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLPDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 469 EKF Y+ + +N + ++ VDE TI V ILG T TG ++D+ L + L + N +T + IHVDAASGGF PF+ PD+ WDFRL V SIN SGHKYGLVY G+GWV+W+ + LP+EL+F ++YLG + PT +NF Sbjct: 166 EKFCVYWDIDMRVVPMDKEHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINF 316 HSP 2 Score: 45.8246 bits (107), Expect = 1.625e-42 Identity = 21/50 (42.00%), Postives = 30/50 (60.00%), Query Frame = 3 Query: 471 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAPREGLENTGRFEILS 620 S+ +S II QYY F+R GFEGY+ I + A+ +E TG F+I + Sbjct: 317 SRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFN 366 The following BLAST results are available for this feature:
BLAST of DY260155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260155 ID=DY260155; Name=DY260155; organism=Citrus clementina; type=EST; length=1204bpback to top |