DY260170

Overview
NameDY260170
Unique NameDY260170
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1049
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1442 contig Ccv1_Contig1442:1..1050. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 2.626e-65
Identity = 123/191 (64.40%), Postives = 149/191 (78.01%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MA IKVHG   STAT RV A+LYEK+L++EL+PVDM+AG HK+EA L+LNPFGQ+P LE GD  LFESRAITQY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP
Sbjct:   49 MASIKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRP 239          

HSP 2 Score: 31.9574 bits (71), Expect = 2.626e-65
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVLALLK 681
            P V+ W   I++RPAWAKV+ L K
Sbjct:  239 PKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 7.613e-65
Identity = 117/187 (62.57%), Postives = 144/187 (77.01%), Query Frame = 3
Query:   54 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            IKVHGS  STAT RV A L EKEL++E VPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRP 189          

HSP 2 Score: 33.8834 bits (76), Expect = 7.613e-65
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVLALLK 681
            P V+AW ADI +RPAW K L  L+
Sbjct:  189 PRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 1.689e-64
Identity = 118/189 (62.43%), Postives = 140/189 (74.07%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MAGIKV G   STAT+RV  +L+EK +++E V V++K GEHKKE F+  NPFG+VP  E GD K+FESRAITQYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RP
Sbjct:    1 MAGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERP 189          

HSP 2 Score: 35.4242 bits (80), Expect = 1.689e-64
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVL 669
            PHV+AW ADITSRP+  KVL
Sbjct:  189 PHVSAWVADITSRPSAQKVL 208          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 3.743e-64
Identity = 117/187 (62.57%), Postives = 142/187 (75.94%), Query Frame = 3
Query:   54 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            IKVHGS  STAT RV A L EK+L++ELVPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRP 189          

HSP 2 Score: 33.8834 bits (76), Expect = 3.743e-64
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVLALLK 681
            P V+AW ADI +RPAW K L  L+
Sbjct:  189 PRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 2.399e-63
Identity = 119/190 (62.63%), Postives = 140/190 (73.68%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MAGIKV G   STAT+RV  +L+EK L++E V +++K GEHKKE F+  NPFG+VP  E GD KLFESRAITQYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RP
Sbjct:    1 MAGIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERP 190          

HSP 2 Score: 35.4242 bits (80), Expect = 2.399e-63
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVL 669
            PHV+AW ADITSRP+  KVL
Sbjct:  190 PHVSAWVADITSRPSAKKVL 209          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 229.95 bits (585), Expect = 1.179e-62
Identity = 122/189 (64.55%), Postives = 148/189 (78.31%), Query Frame = 3
Query:   54 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDAR 608
            IKVHG+  STATQRV  +LYEK LE+E VP+DM AG HK+ ++L+LNPFGQVP LE G+ KLFESRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R
Sbjct:    3 IKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEER 191          

HSP 2 Score: 32.7278 bits (73), Expect = 1.179e-62
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 1
Query:  613 HVTAWAADITSRPAWAKVLALLK 681
            HV+AW   I +RP+W K LAL K
Sbjct:  193 HVSAWCKKILARPSWEKTLALQK 215          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.588e-61
Identity = 118/188 (62.77%), Postives = 142/188 (75.53%), Query Frame = 3
Query:   51 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            G+K+HG   S A  RV A+L EK+L++ELVPV+M+AG+HKKE F++LNPFGQVP  E GD KLFESRAITQYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RP
Sbjct:    2 GMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRP 189          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.273e-56
Identity = 117/193 (60.62%), Postives = 139/193 (72.02%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLT-CPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MAGIKV G   ST+T+RV  +L+EK L++ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT L     K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP
Sbjct:    1 MAGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERP 193          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 4.727e-55
Identity = 115/193 (59.59%), Postives = 140/193 (72.54%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLT-CPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MAGIKV G   S AT+RV  +L+EK L++ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT L     K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP
Sbjct:    1 MAGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERP 193          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 8.769e-41
Identity = 87/190 (45.79%), Postives = 118/190 (62.11%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPP 614
            MA +K++G   S    RV   L EK L++E+VPVD+  G HK+  FL+LNPFGQ+P L  GD+ LFESRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H           +  L  ARPP
Sbjct:    1 MAPLKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANH---------ALLPALTSARPP 181          

HSP 2 Score: 30.0314 bits (66), Expect = 8.769e-41
Identity = 15/37 (40.54%), Postives = 20/37 (54.05%), Query Frame = 1
Query:  595 CLMHAPHVTAWAADITSRPAWAKVLALLKH*TLCPLP 705
            C+   PHV AW   I +RPA+ K +A +      PLP
Sbjct:  185 CVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
The following BLAST results are available for this feature:
BLAST of DY260170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF6_ARATH2.626e-6564.40Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_TOBAC7.613e-6562.57Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF1_ARATH1.689e-6462.43Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF2_TOBAC3.743e-6462.57Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GST11_ARATH2.399e-6362.63Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF_SILCU1.179e-6264.55Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF_HYOMU2.588e-6162.77Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GST16_ARATH3.273e-5660.62Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH4.727e-5559.59Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE8.769e-4145.79Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YI17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260170 ID=DY260170; Name=DY260170; organism=Citrus clementina; type=EST; length=1049bp
AAGTCACAACTCTTAATAACAAGCGAGGGAAGGAAGACCCAAAGATGGCA
GGCATCAAGGTCCACGGTTCTGTTTTCTCAACTGCTACGCAGCGAGTTTT
CGCATCCCTCTACGAGAAGGAGCTCGAATACGAGCTTGTTCCCGTAGACA
TGAAGGCTGGTGAACACAAAAAGGAGGCCTTCCTTTCTTTGAATCCATTC
GGTCAAGTTCCGGTGCTTGAACACGGCGACCAGAAGCTCTTCGAATCAAG
GGCAATCACCCAATACATCGCCCAGGAGTTTCCAGACAAAGGCACCCAGT
TAACATGCCCAGGCAAGCCCATCGCCCCGTTATTGGTATGGAAGGAGGTG
GAGGCACTCCAGTTCGACCCCCCATCATCGAAGCTCAACTGGGAGCTCGT
GTACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAGAAA
ATGAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTTGTCT
CAGTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGCATCA
TCTCCCCAATATTAATTTGTTGTTGGGGACGCCTGTCAAGAAGCTGTTTG
ATGCACGCCCCCCATGTTACCGCATGGGCAGCTGATATCACTTCCAGACC
GGCTTGGGCTAAGGTCCTTGCCTTGCTCAAACACTGAACACTCTGCCCGC
TACCTACTAAACGTTAGTCCCTCCTCGGTGGTCACTTATCTTTTGTAATA
CCTATTAAGCTGGTTTTCCAATTCCTATTCTCTTGTTTGGCGTTTGTCTC
CCATATTCTGCAAAATATTGAGGCCTTGTAATTTGGACCACCCGTTTCTG
ATTTTCACCGCACCGCCCCCAAATCAACTTTTAAGTTGAGGCGCTGAGGT
TTTAATTTTACCCAAGCACCCCAACAAAACCAAAACCCGGAAAAATTCCT
GCCTAAAGGCCCCCGCTGGCTAAAATTCCTAATCCACATGCACCCACCCG
CCCCCCGGGGCTTCTTCCCCAAAAACAAATCGAAAAAATCAAAAACCCA
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