DY260173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 5.426e-53 Identity = 108/194 (55.67%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 216 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPADPGAXXXXXXXXXGENILDMKSHSLSRRDAL---------MPVAAECKEVLPASSGGVGDFAMNKVPF-AGGSAAGSTPSWHMDE 767 M+IQCNVCEAAEA VLCCADEAALCW CD+K+HAANKLA KHQRVPLS+S++ +PKCDICQE SGFFFCLQDRALLCRKCDVAIHT N +VSAHQRFLLTG+KVGLE D G + ++ K S + + + V+P + V D K+P + GS GS P W ++E Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTG-PSTKSSPTNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTK--VNDQTSTKLPLVSSGSTTGSIPQWQIEE 191
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.098e-37 Identity = 71/106 (66.98%), Postives = 87/106 (82.08%), Query Frame = 3 Query: 216 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGL 533 M+IQC+VCE A A V+CCADEAALC +CD ++HAANKLASKHQR+ L+S ST+ P+CDICQE + F FC++DRALLCR CD +IH ANS + HQRFL TG+KV L Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.939e-34 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 3 Query: 216 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGL 533 M+IQC+VCE A A ++CCADEAALC +CD +VHAANKLASKHQR+ L S ST+ P CDIC E + F FC++DRALLCR CD A H N+ + HQRFL TG++V L Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVAL 106
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.280e-32 Identity = 80/208 (38.46%), Postives = 109/208 (52.40%), Query Frame = 3 Query: 216 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL---SSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPADPGAXXXXXXXXXGENILDMKSHSLSRRDAL-MPVAA--ECKEVLPASSGGVGDFAMNK---VPFAGGSAAGSTPSWHMDEFLAPSRTPPKYKPSG 812 M+I+C+VC+ EA V C ADEA+LC CD +VH ANKLASKH R L SSS+T P CDICQ+ FC QDRA+LC+ CD +IH AN + H RFLLTGVK+ + + S+S L P++A + ++ P S GD ++N+ + P WH+++FL S + SG Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSG 208
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.182e-15 Identity = 41/92 (44.57%), Postives = 50/92 (54.35%), Query Frame = 3 Query: 228 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 503 C+ C +A V C AD A LC CD +VHAAN+LAS+H+RV + C C+ FFC D A LC CD IH+AN HQR Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.491e-15 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 228 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPA 542 C+ C++ A + C AD A LC +CD K+H ANKLAS+H+RV L C++C++ C D A LC CD IH+AN H+R +T + PA Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA 103
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.660e-15 Identity = 39/92 (42.39%), Postives = 49/92 (53.26%), Query Frame = 3 Query: 228 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 503 C+ C +A V C AD A LC CD +VHAAN++AS+H+RV + C C+ F C D A LC CD IH+AN HQR Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.307e-14 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 228 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLT 515 C+ C++A A + C D A LC CD KVHAANKLAS+H RV + C++C++ C D A LC CD IH+AN H+R +T Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.445e-13 Identity = 36/92 (39.13%), Postives = 49/92 (53.26%), Query Frame = 3 Query: 228 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 503 C+ C + V C AD A LC CD +VH+AN++AS+H+RV + C+ C+ F C D A LC CD +H+AN HQR Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
BLAST of DY260173 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.363e-13 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 3 Query: 228 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRF 506 C+ C+++ A V C AD A LC CD +VH AN+L +KH R L CD C E+ FC +R++LC+ CD HTA+S + + + F Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESPSSLFCETERSVLCQNCDWQHHTASSSLHSRRPF 96 The following BLAST results are available for this feature:
BLAST of DY260173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260173 ID=DY260173; Name=DY260173; organism=Citrus clementina; type=EST; length=1001bpback to top |