DY260180

Overview
NameDY260180
Unique NameDY260180
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1070
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260180 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.776e-59
Identity = 87/164 (53.05%), Postives = 113/164 (68.90%), Query Frame = 1
Query:  502 GNPSALLVPNGADAVRSDEKLKIGVVLSGGQAPGGHNVIPGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPHRKPGWL*YDP*WE-RQEPKPPKPFKTTYRNSHETLIWTALSLMGGEDSKNKGLPPLPETLRD*KT*KPLGLGTPQNPLVGDLK 990
            G PSA+LVP+ AD++ S+++LKIG+VLSGGQAPGGHNVI GI+DYLQDRAKGS+LYGFRGGPAGIMKC YV+LT+DYI+P+R  G   +D     R + + P+ FK     + + L    L ++GG+DS N     L E  R  K  K   +G P+  + GDLK
Sbjct:   61 GQPSAMLVPDVADSLDSNQQLKIGLVLSGGQAPGGHNVISGIFDYLQDRAKGSILYGFRGGPAGIMKCNYVQLTADYIHPYRNQGG--FDMICSGRDKIETPEQFKQAEETAGK-LDLNGLVVIGGDDS-NTNACLLAENFRS-KNLKTRVIGCPKT-IDGDLK 218          

HSP 2 Score: 101.679 bits (252), Expect = 6.776e-59
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 3
Query:  339 GRVASVYSELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNPDEIAKLFPNLFGQP 509
            GR ASVYSE+Q+SRI+H LPLPSVL +PFKIV GP SSAAGNPDEIAKLFPNLFGQP
Sbjct:    7 GRAASVYSEVQSSRIEHVLPLPSVLNHPFKIVQGPPSSAAGNPDEIAKLFPNLFGQP 63          
BLAST of DY260180 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.053e-49
Identity = 78/167 (46.71%), Postives = 102/167 (61.08%), Query Frame = 1
Query:  502 GNPSALLVPNGADAVRSDEKLKIGVVLSGGQAPGGHNVIPGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPHRKPGWL*YDP*WE-RQEPKPPKPFKTTYRNSHETLIWTALSLMGGEDSKNKGLPPLPETLRD*KT*KPLGLGTPQNPLVGDLKREK 999
            G P   LVP+ +  V  ++ LKIGVVLSGGQAPGGHNVI GI+DYLQ   KGS +YGFRGGPAG+MK KYV LT ++IYP+R  G   +D     R + + P+ FK     + + L    L ++GG+DS N     L E  R  K  K   +G P+  + GDLK ++
Sbjct:   61 GQPHVSLVPDDSGDVAMNQILKIGVVLSGGQAPGGHNVISGIFDYLQTHCKGSTMYGFRGGPAGVMKGKYVVLTPEFIYPYRNQGG--FDMICSGRDKIETPEQFKQA-EETAKKLDLDGLVVIGGDDS-NTNACLLAENFRS-KNLKTRVIGCPKT-IDGDLKSKE 221          

HSP 2 Score: 92.4337 bits (228), Expect = 7.053e-49
Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 3
Query:  342 RVASVYSELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNPDEIAKLFPNLFGQP 509
            R A+VYSE+Q SR+DH LPLPSVL +PFK+VDGP SSAAG+P+EIAKLFP+L+GQP
Sbjct:    8 RYAAVYSEVQNSRLDHPLPLPSVLGSPFKVVDGPPSSAAGHPEEIAKLFPSLYGQP 63          
The following BLAST results are available for this feature:
BLAST of DY260180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PFPB_RICCO6.776e-5953.05Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU7.053e-4946.71Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP11YJ07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260180 ID=DY260180; Name=DY260180; organism=Citrus clementina; type=EST; length=1070bp
TCATCAACTATGGTCAAATCCGATTTCCCTCCCGCCCAAAAGTTTCTGAT
CAAAGAATCAAAACCTCCACCAACCCAACACGTGGCAATCACATTGGGGC
GGAGACTCCCAAGTCCCAAGCCTAGCCTGAAATAACGAAAAGACTTTCCT
GCCCTTTTCAACGATATTATCCCGGAGTCTCCAGGACAAATTAGATGCGT
TCTATCTTCTATGCTCACCGTCACAGTAACACTCCCTACTAGACACAGTT
TGGTAATAAACTCGATAGATTAGAAACAATGTCTCCGTCCTTGGTGGCAA
ACGCCGACCTCAGTCCCGTCACGTCCGGTACCGTTAAGGGACGCGTGGCT
TCAGTTTATAGCGAACTCCAAACGAGTCGAATCGATCACGCCCTCCCTCT
CCCTTCTGTTCTCAAAAACCCTTTCAAAATCGTCGATGGCCCCGCTAGCT
CCGCCGCCGGCAATCCAGATGAGATTGCGAAATTGTTTCCAAATCTGTTC
GGGCAACCCGTCCGCATTGTTGGTGCCGAACGGTGCTGACGCGGTGCGAT
CTGATGAGAAGTTGAAAATCGGCGTCGTCTTGTCTGGAGGTCAGGCGCCA
GGTGGACACAATGTGATCCCTGGAATCTATGATTACTTGCAGGATCGCGC
GAAAGGGAGTGTACTGTATGGATTCCGAGGAGGTCCCGCTGGAATCATGA
AGTGCAAATACGTTGAACTAACTTCCGATTATATTTATCCCCATAGAAAA
CCAGGGTGGCTTTGATATGATCCGTAGTGGGAGAGACAAGAACCCAAACC
CCCAAAACCGTTTAAAACAACCTACAGAAACAGCCATGAAACCTTGATTT
GGACGGCCCTGTCCCTTATGGGTGGGGAAGATTCCAAAAACAAGGGCCTG
CCCCCCTTGCCCGAAACCCTCCGGGATTAAAAAACTTAAAAACCCCTTGG
TCTGGGAACGCCCCAAAACCCATTGGTGGGGGACCTGAAAAGGGAAAAAA
AGGCCCCCCGCCAACCCTTGGCATTTGACCACCGCCCGGCACAAAAAACA
TTTCGCCCAAAACGAGTGTG
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