DY260182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1) HSP 1 Score: 501.901 bits (1291), Expect = 2.561e-141 Identity = 242/264 (91.67%), Postives = 249/264 (94.32%), Query Frame = 3 Query: 33 MGSSE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTLAIAGF 815 MGSSE GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGLQTRSF F+DECVEGV L + F Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 264
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1) HSP 1 Score: 499.59 bits (1285), Expect = 1.271e-140 Identity = 241/264 (91.29%), Postives = 248/264 (93.94%), Query Frame = 3 Query: 33 MGSSE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTLAIAGF 815 MGSSE GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGLQTRSF F+DECVEGV L + F Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 264
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2) HSP 1 Score: 491.5 bits (1264), Expect = 3.462e-138 Identity = 232/251 (92.43%), Postives = 241/251 (96.02%), Query Frame = 3 Query: 63 YTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTLAIAGF 815 YTY ELE+EPYWP EKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQL+T VSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTD+FEMWGDGLQTRSF F+DECVEGV L + F Sbjct: 7 YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 257
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1) HSP 1 Score: 488.804 bits (1257), Expect = 2.244e-137 Identity = 231/263 (87.83%), Postives = 248/263 (94.30%), Query Frame = 3 Query: 33 MGSSEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE-TNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTLAIAGF 815 MG++ GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWKKNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM+EA+RI+G+KRFFYASSACIYPEFKQLE TNVSLKESDAWPAEPQDAYGLEKLA+EELCKHY KDFGIECR+GRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGLQTRSF F+DECVEGV L + F Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 263
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.759e-17 Identity = 70/240 (29.17%), Postives = 114/240 (47.50%), Query Frame = 3 Query: 111 LRISVTGAGGFIASHIARRL-KSEGHYIIASD--------WKKNEHMTEDMFCHEFHLVDLRVMDNCL-KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFK-QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCR--KALTSTDKFEMWGDGLQTRSFPFLDECVEGV 791 ++I VTGA GFI SH+ L K + H +I D K +++ + F + ++ L + +GVD +F+LAA G ++ +N +LEA R ++ F +AS++ +Y E + ++ N SL P YG+ KL E+LC Y + FGI + RF +YGP R++ AF R K ++GDG Q+R F ++ +CV+G+ Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQGKVSENTSLS--------PLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGP-------RQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGI 225
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.409e-14 Identity = 66/239 (27.62%), Postives = 112/239 (46.86%), Query Frame = 3 Query: 105 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTL 800 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++LA+ ++ N + NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G+ L Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.409e-14 Identity = 66/239 (27.62%), Postives = 112/239 (46.86%), Query Frame = 3 Query: 105 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTL 800 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++LA+ ++ N + NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G+ L Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.409e-14 Identity = 66/239 (27.62%), Postives = 112/239 (46.86%), Query Frame = 3 Query: 105 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTL 800 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++LA+ ++ N + NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G+ L Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.409e-14 Identity = 66/239 (27.62%), Postives = 112/239 (46.86%), Query Frame = 3 Query: 105 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTL 800 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++LA+ ++ N + NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G+ L Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
BLAST of DY260182 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.140e-14 Identity = 65/239 (27.20%), Postives = 113/239 (47.28%), Query Frame = 3 Query: 105 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFPFLDECVEGVPTL 800 ++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V++ + VD +++LA+ ++ N + NT+ + NML ++ G R AS++ +Y + V + + W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL ++ ++G G QTR+F ++ + V G+ L Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EQLTVYGSGEQTRAFQYVSDLVNGLVAL 313 The following BLAST results are available for this feature:
BLAST of DY260182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260182 ID=DY260182; Name=DY260182; organism=Citrus clementina; type=EST; length=1059bpback to top |