DY260184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.502e-24 Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLD 794 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ S+FVGDL V D +L+E F YPS + KVVLD Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 131
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.502e-24 Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLD 794 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ S+FVGDL V D +L+E F YPS + KVVLD Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 131
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.502e-24 Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLD 794 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ S+FVGDL V D +L+E F YPS + KVVLD Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 131
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.502e-24 Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLD 794 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+AT+ K+ DN P+ S+FVGDL V D +L+E F YPS + KVVLD Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 131
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.371e-24 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLD 794 ++W+GDL +MDEN++ FA+ GE + S+K+IRN+ TG+ GY FVEF ATAEK L +P + F+LN+ T+ K+ DN P+ S+FVGDL V D +L+E F YPS + KVVLD Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 131
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.077e-22 Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGEIA-SIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTDQP--FRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLD 794 ++W+GDL +MDEN++ F++ GE A +K+I ++ TG S GY FVE A+ ++ +Q L+P ++ P F+LN+AT+ KR + GP+ S+FVGDL + V D LH+ F ++PS K AKVV D Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTD 134
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.147e-22 Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 387 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSE--GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN----GPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLDANTG 806 G G + T+W+GDL WMD ++ +AS E ++KV+R+K + Y FV+F + A AE+ L Y + ++P F+LNWAT G + +N P+ SIFVGDL DS L TF S YPS +AK+++D TG Sbjct: 78 GVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWAT--GGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTG 221 HSP 2 Score: 25.0238 bits (53), Expect = 4.147e-22 Identity = 12/41 (29.27%), Postives = 18/41 (43.90%), Query Frame = 1 Query: 781 KLSLMPIPVEPKVMVLVRFGNENEKSRATTENDGVYCSSRP 903 K+ + P+ + VRF +E E+ A G C RP Sbjct: 213 KIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRP 253
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.155e-20 Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 387 GSGGGEN----KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWAT-FSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLDANT 803 GS EN T+W+G+L W+ E ++ + + G+ +K+IRN+ TG++ GY FVEF + A + S + +P T+ F+LNWA+ +K + SIFVGDL+ +V + ++ FASRY S K+AK++ D T Sbjct: 82 GSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQT 224 HSP 2 Score: 26.9498 bits (58), Expect = 2.155e-20 Identity = 14/42 (33.33%), Postives = 18/42 (42.86%), Query Frame = 1 Query: 829 VRFGNENEKSRATTENDGVYCSSRPQAYWCRHPQGNPLGLSP 954 VRF +EN++ A E G C RP P+ SP Sbjct: 233 VRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFSP 274
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.327e-15 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 411 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLDAN 800 ++W+G+L +MDE+++ FA GE + I++IR+K TG + GYGFVE E+ L+ +P P R + + G + S+FV DL V D +L+E F + S + K+VLDAN Sbjct: 3 SLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG--KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLDAN 131
BLAST of DY260184 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 4.387e-12 Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 396 GGENKTIWVGDLHHWMDENYLHSCFASTGEI-ASIKVIRNKQTGL----------SEGYGFVEFFTHATAEKVLQSYTSILMPN-TDQPFRLNWATFSTGDKRSD-----NGPDLSIFVGDLAAHVTDSLLHETFASRYPSVKAAKVVLDANTG 806 G +++GDL D+N + +AS GE +++++ N ++GY FV+F + A L +L+PN ++ +LNWAT S + + +G + SIFVGDLA +VT+S L E F +RY S AK+V D TG Sbjct: 50 GTTGNQLYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTG 202 HSP 2 Score: 23.0978 bits (48), Expect = 4.387e-12 Identity = 13/41 (31.71%), Postives = 21/41 (51.22%), Query Frame = 1 Query: 829 VRFGNENEKSRATTENDGVYCSSR-----PQAYWCRHPQGN 936 V+F N +E+ A +E GV+ + R P + +H GN Sbjct: 210 VKFTNSDEQQLALSEMQGVFLNGRAIKVGPTSGQQQHVSGN 250 The following BLAST results are available for this feature:
BLAST of DY260184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260184 ID=DY260184; Name=DY260184; organism=Citrus clementina; type=EST; length=1060bpback to top |