DY260185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.040e-22 Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 2 Query: 194 SKTPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQ 397 +K +HPPYFQMI EAL AL +K GSSPYA+AKYME+KHKDELPANFRKIL +QLK+ AAKG LIKI+ Sbjct: 44 AKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 111
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 2.100e-15 Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 200 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQG 400 TP+HP Y +M++EA+ AL+++SGSS AI K++E+KHK LPANFRKIL Q+K A G L K++G Sbjct: 52 TPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKG 118
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 4.678e-15 Identity = 36/66 (54.55%), Postives = 54/66 (81.82%), Query Frame = 2 Query: 200 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQ 397 +P+H PY +M++EA+T+L++++GSS YAIAK++E+KHK +LP NFRK+L VQLK A G L K++ Sbjct: 47 SPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVK 112
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.173e-14 Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = 2 Query: 191 QSKTPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQ 397 +S TP+HPPYF+MI +A+ L++++GSS +AI K++EEK K LP+NF+K+L QLK F A L+K++ Sbjct: 50 RSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVK 117
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.719e-13 Identity = 33/66 (50.00%), Postives = 52/66 (78.79%), Query Frame = 2 Query: 200 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQ 397 T SHP +F+MI++A++ L++++GSS YAI K++E+KHK +LP+NFRK+L LK A G L+K++ Sbjct: 48 TSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVK 112
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 206 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQG 400 SHP Y +MI +A+ +L++K+GSS YAIAK++EEK K +LPANF+K+L LK A G LIK++G Sbjct: 61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKG 124
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.099e-11 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 200 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQ 397 T SHP Y +MI +A+ L++++GSS YAI K++EEKHK LP FRK+L V LK A L+K++ Sbjct: 59 TSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVK 123
BLAST of DY260185 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.991e-11 Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 206 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIQ 397 SHP Y +MI +A+ L++++GSS YAI K++EEK K ELP FRK+L + LK A G L+K++ Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVK 123 The following BLAST results are available for this feature:
BLAST of DY260185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260185 ID=DY260185; Name=DY260185; organism=Citrus clementina; type=EST; length=1035bpback to top |