DY260214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 OS=Arabidopsis thaliana GN=MBP1 PE=1 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 4.470e-95 Identity = 179/264 (67.80%), Postives = 203/264 (76.89%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGE-DDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSMXXXXXXXXXXXXXXTEEAGQKGKTGGTA 817 MVLEAT+ICIDNSEWMRNG Y+PSR QAQTEA NL+CGAKTQ NPENTVG++TMAGKGVRVL TPTSDLGKILACMHGL++GGE+NL A IQ+AQLALKHRQNK Q+QRIIVF GSPIK+EKK LE++G++LKKNSV+LDIVNFGE DDE +KLEALL AVNNND SH+VHVP G NALSDVLLSTP+FTGD ++FGVDP+ DPELA +VSM +EAGQK K G TA Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANALSDVLLSTPVFTGD--EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTA 262
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.707e-58 Identity = 131/303 (43.23%), Postives = 183/303 (60.40%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIF-TGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSMXXXXXXXXXXXXXXTEEAGQKGKTGGTAIQPPGGTND*TRTVFPPSEANVKKKNYKAGPGVCHREAL 934 M LEAT++C+DNSEWMRNG + PSR +AQ +A NLIC +KTQ NPE+ V +M+MAGK VLVT T +L KIL+ L+I G+++ + +Q+AQLAL+HRQN Q RII FVGSP+K K+ L + ++LKKN VA+DI+NFGE E N++KLEA + VNNND SHL+ VPPGP+ LSD++L +PI +G G+ EF ++ DP+LA ++S+ E+ Q+ + G TN T T P+E+N+ N++ P + AL Sbjct: 1 MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPEVLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKETKEELIQLAKRLKKNGVAVDIINFGEVTE-NSDKLEAFINDVNNNDESHLLTVPPGPHILSDIILQSPIVESGSGQFGS-----------------EF-INADTDPDLAMALKLSL-------------EEEKQRQERERKAREEANGGSTNSGTTTTTAPTESNM-DVNFEDDPELAEALAL 270
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.114e-53 Identity = 114/237 (48.10%), Postives = 156/237 (65.82%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 MVLE+T++C+DNSE+MRNG + P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVGSP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+G +EFGVDP DPELA +VSM Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGEG----------GAMLGLGASDFEFGVDPSADPELALALRVSM 224
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_HUMAN (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.114e-53 Identity = 114/237 (48.10%), Postives = 156/237 (65.82%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 MVLE+T++C+DNSE+MRNG + P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVGSP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+G +EFGVDP DPELA +VSM Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGEG----------GAMLGLGASDFEFGVDPSADPELALALRVSM 224
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.114e-53 Identity = 114/237 (48.10%), Postives = 156/237 (65.82%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 MVLE+T++C+DNSE+MRNG + P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVGSP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+G +EFGVDP DPELA +VSM Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGEG----------GAMLGLGASDFEFGVDPSADPELALALRVSM 224
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: RPN10_YEAST (26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae GN=RPN10 PE=1 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 6.758e-51 Identity = 111/237 (46.84%), Postives = 152/237 (64.14%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNN--NDSSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 MVLEAT++ IDNSE+ RNG + +RF+AQ ++ I AK NPENTVG+++ AG RVL T T++ GKILA +H +I G+L++A +Q+AQL LKHRQNK Q QRI+ FV SPI + L + + LKKN+VA+DI+NFGE ++ NTE L+ +AAVNN ++SHL+ V PGP L + + S+PI +G +FGVDP DPELA ++SM Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQ-NTELLDEFIAAVNNPQEETSHLLTVTPGPRLLYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSM 236
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: RPN10_SCHPO (26S proteasome regulatory subunit rpn10 OS=Schizosaccharomyces pombe GN=rpn10 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 6.325e-49 Identity = 106/235 (45.11%), Postives = 144/235 (61.28%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 MVLEAT+I IDNSEWM NG Y P+RF+AQ + ++I K NPEN G+MT+ +VL T T D GK L+ MH L + G GIQ+AQLALKHR+NK Q+QRI+ FVGSPI ++K L + +++KKN+VA+DI++ GE N L+ + A N++DS HLV +PP P LSD++ +PI G +E+GVDP+ D ELA ++SM Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ--NESALQHFIDAANSSDSCHLVSIPPSPQLLSDLVNQSPIGQG---------------VVASQNQFEYGVDPNLDVELALALELSM 218
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_DROME (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Pros54 PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.840e-48 Identity = 113/237 (47.68%), Postives = 146/237 (61.60%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 MVLE+T+IC DNS++ RNG Y P+R Q + NL+C K + NPEN VG+MT++ V VL T TSD G+I + MH ++ GE+NL GI++A L LKHRQ K + RI+VFVGSPI HE+ L ++LKK V +DIV+FG D N E L A + A+N D SHLV VP G + LSD LLS+PI G+ +EFGVDP+ DPELA +VSM Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFG-DHGNNNEILTAFINALNGKDGTGSHLVSVPRG-SVLSDALLSSPIIQGE---------DGMGGAGLGGNVFEFGVDPNEDPELALALRVSM 225
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PIPSL_HUMAN (Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.106e-44 Identity = 104/235 (44.26%), Postives = 141/235 (60.00%), Query Frame = 2 Query: 35 LEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 L+ +DNSE+M NG + P+R QAQ +A N +C +KT+ NPEN VG++T+ VL T T D G+IL+ +H ++ G++ GI VA LALKHRQ + RII FVG+P++ +K L + + LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S PI G+G +EFGVDP DPELA +V M Sbjct: 488 LQMLTTSVDNSEYMGNGDFLPTRLQAQQDAVNTVCHSKTRSNPENNVGLITL-DNDCEVLTTLTPDTGRILSKLHTVQPKGKITFCMGIHVAHLALKHRQGNNHKIRIIAFVGNPVEDNEKNLVKLAKCLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISFPILAGEG----------GAMMGLGASDFEFGVDPSADPELALVLRVFM 709
BLAST of DY260214 vs. ExPASy Swiss-Prot
Match: PSMD4_SCHMA (26S proteasome non-ATPase regulatory subunit 4 OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 1.081e-40 Identity = 95/237 (40.08%), Postives = 141/237 (59.49%), Query Frame = 2 Query: 29 MVLEATLICIDNSEWMRNGYYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPHPDPELAPCSQVSM 733 M EAT+I +DNS++MRNG + P+R QAQ +A LIC +K Q NPENT+G++++A VL T T+D+ KI +H +E G + + I++A LAL+HRQ + Q+ RI+ F+GSPI ++K L + ++LKK V +DI+NFGE +E N +KL + +N D SHL+ V PG L D L+++P+ G+ EFG+D DP+L +VSM Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLAN--TEVLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIGSPILEDEKELTRLAKRLKKEKVNVDIINFGE-NETNEQKLSEFIDTLNGKDGTGSHLISVAPG-TVLHDTLMTSPVVAGE----------DGSGMAGAGLGLEFGLDGAEDPDLLYALRVSM 223 The following BLAST results are available for this feature:
BLAST of DY260214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260214 ID=DY260214; Name=DY260214; organism=Citrus clementina; type=EST; length=1020bpback to top |