DY260216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260216 vs. ExPASy Swiss-Prot
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.661e-18 Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3 Query: 159 ETGASLIEKDPVTTTPRNGITYDRVNILIENERIIPVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFESFSKTCLVENVSVLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFNLIEEPIRPTATKA 758 E G+ LI++ P TPR +P+ EV EI+ K+ +A D C ++ KIK+ ESE N+ C+ +N+ VL F+ FS + +L EILS L +FP+ E ++ L SA+S C+ L S D S R+NA ++ E++S D+ +V+ + G EAL LI + + ++TK+ Sbjct: 100 EKGSPLIQRIP---TPR-----------------VPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGD--EKLTFMLNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILS--LDETRVHSFAVENGVAEALVKLIRDSVSSSSTKS 275
BLAST of DY260216 vs. ExPASy Swiss-Prot
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.298e-12 Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 3 Query: 261 IPVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFESFSKTCLVENVS-VLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFNLI 725 +PV S +V EI ++ A D C ++V K+ KESE N+ C+ +N A VL F++FS+ N S +LEE +S L + P+ E + L + SS ++ L +GD +NA L+ EL+ + + V+ L++ G EA I Sbjct: 116 VPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENA---NASLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELL--ELNVTHVHALTKINGVQEAFMKSI 262 The following BLAST results are available for this feature:
BLAST of DY260216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260216 ID=DY260216; Name=DY260216; organism=Citrus clementina; type=EST; length=1074bpback to top |