DY260236

Overview
NameDY260236
Unique NameDY260236
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1095
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260236 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.291e-38
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 1
Query:   64 KFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 372
            KFNVGG   WVTNP ENY  WSG+NRFLV+DTL+F Y KG+DSVL VNK DYD+CNTK P+ ++D GDSE  LDR GPFYFISGN D+C+KGQKL VVV+  R
Sbjct:   30 KFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of DY260236 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 6.663e-23
Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1
Query:   73 VGGKHG-WVTNPGENYN--KWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 372
            VGGK G W   P  +Y+  +W+ + RF V D + F+Y+ G DSVL V K+ Y+SCNT  PL     G+++ KLDRSGPFYFISG + HC+KGQKL +VV+  R
Sbjct:   33 VGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPR 135          
BLAST of DY260236 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 9.005e-20
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   73 VGGK-HGWV--TNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 372
            VGGK   W   ++P E+ NKW+   RF V DTL +KY +  DSVL V KD Y +CNT  P     +GD++ KL+RSGP++FISG+  +C +G+KL +VV+  R
Sbjct:   28 VGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130          
BLAST of DY260236 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.329e-14
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query:   73 VGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVV 360
            VG   GW T    +Y KW+  N+F V D+L F Y     +VL V+++ + SCN+  P     SG     L R G FYF+ G   HCQ GQK+ + V
Sbjct:    6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of DY260236 vs. ExPASy Swiss-Prot
Match: NO552_SOYBN (Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.051e-12
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   64 KFNVGGKH-GW---VTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNT-KKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 363
            K+ VGG    W   ++ P ++ + W+  +RF + DTL FKY+K ++SV   N+ DY+ CNT  K  +  + G+++  L + G  +FISGN  HCQ G KL V+V+
Sbjct:   28 KYVVGGSEKSWKFPLSKP-DSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVI 131          
The following BLAST results are available for this feature:
BLAST of DY260236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ENL2_ARATH3.291e-3869.90Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
ENL1_ARATH6.663e-2351.46Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
ENL3_ARATH9.005e-2047.57Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
MAVI_CUCPE4.329e-1439.58Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
NO552_SOYBN4.051e-1239.05Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP11YM22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260236 ID=DY260236; Name=DY260236; organism=Citrus clementina; type=EST; length=1095bp
CAGAAATCTCTTCGTCTTTCCTTGGCTCTCTTTGCATTTTTCATCTCTTC
CTCTCACGCACTCAAATTCAACGTGGGTGGCAAACACGGCTGGGTTACAA
ACCCTGGAGAAAATTACAACAAATGGTCTGGGAGAAACAGGTTCCTCGTC
AATGATACCCTCTTTTTCAAGTACAAGAAAGGATCAGACTCGGTGTTGTT
AGTGAACAAAGATGATTACGACAGCTGCAACACGAAGAAGCCTTTGCTGA
AACTGGATTCGGGTGACTCAGAGTTCAAGCTTGATCGTTCGGGTCCTTTC
TATTTCATAAGTGGAAACCATGATCATTGCCAAAAGGGACAGAAATTAAT
CGTCGTCGTTTTGCATGAAAGGCCCCCCCCTCCCTCAACTGGACCCCCCA
CCACGAAACCTCCACCGCATGCCCCGTCTCCTAAGTCTCCTTCTCCGGCC
ACACAGCCGCCGGCGACTTCCCCCTCCACCTCACCAACATCTCATGCACC
TTCGGCTAATCCTCCTAAAGGGTCCTCTCCGACGCCGGCAACTTCACCTT
CCACGTCTTCCCCTTATCCTCCAAAAGGATACTCTCCAGTGCCCGCGACT
TCACCTTCCACGTCACCATCATCTCATGCCCCTTCGCCTTATCCTCCAAA
AGGGTACTCCCCGGTGGCCGCAACCTCACCTTCTACCTCCACCATCATCA
TCCCCAATCCACCTGCGGGCTAAAGCCCCAAACTGGGCTGTCACCGGCTC
CCGGAACTTCCCCCTCCACCTCACCGTAATCCCAACCACCCGCGGGCTAA
TGCTCCAACCTGGGCCTGTCAACGGCCTCCGGAAACTCCCCCCCACCCGG
TCCCCCTTCTCCGAGACCCCCCTGCGGCCACAGCCCCCCACCCGGAAATA
TCCCCCCCCCCCGGGAACCTCCCCCTTTCAAAGTAACCCACCGGCGGAAT
CCACCCCACCCCCCGCGTAAAAGCGCCCTACCCTCTCGCCGCCCATCAAA
ACACCAACCAATCCCCCCTCGACACGGGCACCCACCCCCCCCCCCCCCCC
TCACCGGCCGGTTCCCCAAAACTCCCTGTTCCCTCCCACACCCCT
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