DY260282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260282 vs. ExPASy Swiss-Prot
Match: AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 6.870e-98 Identity = 146/194 (75.26%), Postives = 158/194 (81.44%), Query Frame = 1 Query: 22 MALMENSKP---TVEIHPLKFXXXXXXXXXXXXXXXLIHDFPPPSHAGDRCPLVGSHGAGKTTILKIIGGKHMVEPEMVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 594 MA+ E K TVEI L+F LI DF ++ DRC LVGS+GAGKTTILKI+GGKHMVEP MV+ LGRSAFHDT LTSSGDL YLGGEWRR+VAFAGFEVPIQMD+SAEKMIFGVAGIDPQRR ELIKVLDI++SWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD Sbjct: 1 MAVTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 194 HSP 2 Score: 83.5741 bits (205), Expect = 6.870e-98 Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 3 Query: 651 ATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEA*QLSLMRTVESW 791 ATHIFDGLE+WP+HIVYVA+GKLQLA+PM+KVKE + SLMRTVESW Sbjct: 213 ATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSLMRTVESW 259 HSP 3 Score: 36.5798 bits (83), Expect = 6.870e-98 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 596 LLRFLRKECEERGAPIIY 649 LL+FLRKECEERGA IIY Sbjct: 195 LLKFLRKECEERGATIIY 212
BLAST of DY260282 vs. ExPASy Swiss-Prot
Match: AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana GN=ABCI21 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.020e-64 Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 1 Query: 121 LIHDFPPPSHAGDRCPLVGSHGAGKTTILKIIGGKHMVEPE-MVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 594 + DF AG RC LVG++G+GKTT+LKI+ GKHMV + +V+ L RSAFHDT L SGDLSYLGG W + AG ++P+Q D SAE MIFGV GIDP RR +LI +LDINL WRMHKVSDGQRRRVQICMGLL PFKVLLLDE+TVDLDV+AR D Sbjct: 28 IFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMD 185 HSP 2 Score: 50.447 bits (119), Expect = 4.020e-64 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 3 Query: 651 ATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKE-A*QLSLMRTVESW 791 ATHIFDGLE W SH+ Y+ G+L+L+ +D++K+ +L+ VE+W Sbjct: 204 ATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVEAW 251 HSP 3 Score: 30.4166 bits (67), Expect = 4.020e-64 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 2 Query: 590 LTLLRFLRKECEERGAPIIY 649 + LL F ++ECE+RGA I+Y Sbjct: 184 MDLLEFFKEECEQRGATIVY 203
BLAST of DY260282 vs. ExPASy Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.104e-62 Identity = 108/159 (67.92%), Postives = 124/159 (77.99%), Query Frame = 1 Query: 121 LIHDFPPPSHAGDRCPLVGSHGAGKTTILKIIGGKHMVEPE-MVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 594 + DF AG RC LVG++G+GKTT+LKI+ GKHMV + +V+ L RSAFHDT L SGDLSYLGG W + V AG EVP+Q D SAE MIFGV G DP RR +LI +LDINL WRMHKVSDGQ+RRVQICMGLL PFKVLLLDE+TVDLDV+AR D Sbjct: 29 IFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMD 186 HSP 2 Score: 45.0542 bits (105), Expect = 2.104e-62 Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 3 Query: 651 ATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKE-A*QLSLMRTVESW 791 ATHIFDGLE W +H+ Y+ G+L M ++E +L+ VESW Sbjct: 205 ATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKTSPNLLSVVESW 252 HSP 3 Score: 29.261 bits (64), Expect = 2.104e-62 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 2 Query: 590 LTLLRFLRKECEERGAPIIY 649 + LL F ++EC++RGA I+Y Sbjct: 185 MDLLEFFKEECDQRGATIVY 204
BLAST of DY260282 vs. ExPASy Swiss-Prot
Match: YE31_SCHPO (Uncharacterized ABC transporter ATP-binding protein C20G4.01 OS=Schizosaccharomyces pombe GN=SPAC20G4.01 PE=4 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.126e-35 Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 154 GDRCPLVGSHGAGKTTILKIIGGKHMVEPEMVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGID-PQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 594 G R LVG++GAGK+T+LK++ GK + + + G+ F + SS YLG EW I D+S ++I V G +RR LI +LDI+L WRMH VSDG+RRRVQ+CMGLL+PF+VLLLDE+TVDLDVLARAD Sbjct: 30 GSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRE----SSSAFVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARAD 166 HSP 2 Score: 38.5058 bits (88), Expect = 1.126e-35 Identity = 15/31 (48.39%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 651 ATHIFDGLENWPSHIVYVAHGKLQLAMPMDK 743 ATHIFDGL WP+H+V+++ G++ P+ K Sbjct: 185 ATHIFDGLAEWPTHLVHLSLGRIVDYGPISK 215
BLAST of DY260282 vs. ExPASy Swiss-Prot
Match: CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae GN=CAF16 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.201e-27 Identity = 63/158 (39.87%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 160 RCPLVGSHGAGKTTILKIIGGKHMVEPEMVKALGRSAFHDTALTSSGD------------LSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDP--QRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARA 591 R +VG++GAGK+T+LK++ GKH+ + G F ++ D +YLG EW I D+ +++ + G D +R L+++LDI++ WRMH++SDGQ+RRVQ+ MGLLKP++VLLLDE+TVDLDV+ARA Sbjct: 36 RSLVVGANGAGKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMNQVDDDESVEDSTNYQTTTYLGTEWCHMSI-------INRDIGVLELLKSI-GFDHFRERGERLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVIARA 185 HSP 2 Score: 34.2686 bits (77), Expect = 1.201e-27 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 651 ATHIFDGLENWPSHIVYVAHGKL 719 ATHIFDGL WP+ + ++ GK+ Sbjct: 205 ATHIFDGLAKWPNQVYHMKSGKI 227 The following BLAST results are available for this feature:
BLAST of DY260282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260282 ID=DY260282; Name=DY260282; organism=Citrus clementina; type=EST; length=1161bpback to top |