DY260288

Overview
NameDY260288
Unique NameDY260288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1042
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260288_ssr1026 microsatellite DY260288_ssr1026:1026..1035. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 4.238e-56
Identity = 114/156 (73.08%), Postives = 125/156 (80.13%), Query Frame = 2
Query:   62 TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            +DSSREENVY+AKLAEQAERYEEMVEFMEKVAKTV+ EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE+SRGN DHVS+IK+YR +IE EL   CDGI +  E   I    L E KV+ LKMKGDY  YL EFK G E+KE  +   V YK
Sbjct:    3 SDSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGILNLLEAHLIPAASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYK 158          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 9.442e-56
Identity = 112/159 (70.44%), Postives = 126/159 (79.25%), Query Frame = 2
Query:   53 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            MSP + SREENVYMAKLAEQAERYEEMVEFMEKVA+TVD EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+DHV++IK+YR +IE EL   CDGI    +   +      E KV+ LKMKGDY  YL EFK+G E+KE  +   + YK
Sbjct:    1 MSPAEPSREENVYMAKLAEQAERYEEMVEFMEKVARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYK 159          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 9.442e-56
Identity = 114/155 (73.55%), Postives = 124/155 (80.00%), Query Frame = 2
Query:   65 DSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            DSSREENVY+AKLAEQAERYEEM+EFMEKVAKT DVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+DHV+ IKEYRS+IE +L   CDGI S  E   I      E KV+ LKMKGDY  YL EFK G E+KE  +   + YK
Sbjct:    3 DSSREENVYLAKLAEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYK 157          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.233e-55
Identity = 115/155 (74.19%), Postives = 124/155 (80.00%), Query Frame = 2
Query:   65 DSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            +S+REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+DHVS IKEYR +IE EL   CDGI +  E   I      E KV+ LKMKGDY  YL EFK G E+KE  +   + YK
Sbjct:    3 ESTREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYK 157          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.233e-55
Identity = 113/156 (72.44%), Postives = 126/156 (80.77%), Query Frame = 2
Query:   62 TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            +DSSREENVYMAKLA++AERYEEMVEFMEKVAKTV+VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+DHV++IKEYR +IE EL   CDGI +  E   I      E KV+ LKMKGDY  YL EFK G E+KE  +   + YK
Sbjct:    2 SDSSREENVYMAKLADEAERYEEMVEFMEKVAKTVEVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIEAELSKICDGILNLLESNLIPSAASPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYK 157          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.747e-55
Identity = 112/154 (72.73%), Postives = 123/154 (79.87%), Query Frame = 2
Query:   68 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            SSREENVY+AKLAEQAERYEEMVEFMEKVAKTVD +ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN DHVS+IK+YR +IE EL   CDGI +  +   +    L E KV+ LKMKGDY  YL EFK G E+KE  +   V YK
Sbjct:    3 SSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYK 156          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 7.993e-55
Identity = 113/159 (71.07%), Postives = 125/159 (78.62%), Query Frame = 2
Query:   53 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            MSP ++SREENVYMAKLAEQAERYEEMVEFMEKVAKT DV ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+ +V+ IKEYRS+IE EL   CDGI    +   +      E KV+ LKMKGDY  YL EFK+G E+KE  +   V YK
Sbjct:    1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYK 159          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 1.044e-54
Identity = 112/154 (72.73%), Postives = 125/154 (81.17%), Query Frame = 2
Query:   68 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            S+REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEEL+VEERNLLSVAYKNVIGARRASWRIISSIEQKEES+GN+DHV++IK+YR +IE+EL   CDGI +  E   I      E KV+ LKMKGDY  YL EFK G E+KE  +   V YK
Sbjct:    2 STREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYK 155          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.781e-54
Identity = 112/156 (71.79%), Postives = 122/156 (78.21%), Query Frame = 2
Query:   62 TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            ++SSREENVYMAKLAEQAERYEEMVEFMEKVAK  D EEL+VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+DHVS IKEYR +IE EL   CDGI +  E   I      E KV+ LKMKGDY  YL EFK G E+KE  +   + YK
Sbjct:    3 SESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYK 158          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.766e-54
Identity = 110/157 (70.06%), Postives = 123/157 (78.34%), Query Frame = 2
Query:   59 PTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            P + SREENVYMAKLAEQAERYEEMVEFMEKVAKTVD EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN+D V++IK+YR +IE EL   CDGI    +   +      E KV+ LKMKGDY  YL EFK+G E+K+  +   V YK
Sbjct:    4 PAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYK 160          
The following BLAST results are available for this feature:
BLAST of DY260288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
14335_ARATH4.238e-5673.0814-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
1433_LILLO9.442e-5670.4414-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14334_SOLLC9.442e-5673.5514-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433E_TOBAC1.233e-5574.1914-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433A_SOYBN1.233e-5572.4414-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14337_ARATH2.747e-5572.7314-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14336_ORYSJ7.993e-5571.0714-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14333_ARATH1.044e-5472.7314-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
1433_MESCR1.781e-5471.7914-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433B_HORVU6.766e-5470.0614-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YA16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260288 ID=DY260288; Name=DY260288; organism=Citrus clementina; type=EST; length=1042bp
TCCTCCCTAAAATTTCGATCGAATCCGTATTCCCCAACCTTAAAACGCTA
AGATGTCCCCTACTGATTCCTCTCGCGAGGAAAATGTCTACATGGCCAAG
CTGGCCGAGCAGGCTGAACGTTATGAGGAAATGGTTGAGTTCATGGAAAA
AGTTGCCAAAACAGTTGATGTTGAGGAGCTAACCGTGGAGGAAAGGAACC
TTCTCTCCGTTGCCTACAAGAATGTGATTGGGGCCAGGAGGGCTTCCTGG
AGGATCATCTCTTCGATTGAGCAGAAGGAGGAGAGCAGGGGAAACCAAGA
CCATGTCTCAGTAATTAAGGAGTACAGGAGCCAGATTGAGAATGAGCTCC
GCATCATNTGTGATGGGATTNTTAGTNNTTTTGAGTTTNATNTTATTTNN
TNTGGTTNATTGGATGAGTTTAAGGTGTATATATTGAAGATGAAGGGTGA
TTATTAGGGGTATTTGGNTGAGTTTAAGAATGGAGATGAGAAGAAGGAAG
ATTGGGATGAGAATTGGGTGATATATAAGTTAATTGGGATAGTGATTTAG
TTTAGTTGAATATAATTAAGTAATAAGTAAGGTGTGGTATATAGGATTTT
AGTGTTATGATTAGAAAAATGTTTATTATGTTAAAGGGGTAAGATTAGGA
TATATTTGATTAGTTATGAATTATTAGAGATATATTGTGTGTGTATGAAT
TTGGATGAGGAGGAGGGAATTGAAAGTGATTTAGTTATATAGATGGAGAA
TAAAATAATTTAATATGATTAATAAGGATGTAAGAATGAGTGTTATGAAG
TGTTTTAGGTATGGTTTTTTTTATAAAATTTAGATAAATATAGGTGAATA
GTATAGAAATATAGAAATGGAGTTATTATTAGATGTGAATTATTAAAAGG
ATATGAAATATTGAAGAGGAGAGGGAAGGGGAAGTATAAAGATGGATAAG
GAATGGGGTTTTTAGATTGTAAATGTTTATAATAAGTAATAGTAAATAAA
ATATTAAAAATAAGAAAAAATAAAAATATATATATAAAATAA
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