DY260290

Overview
NameDY260290
Unique NameDY260290
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1196
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14655 contig Ccv1_Contig14655:811..2006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 8.006e-25
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQFV 253
            +LVSLWE+K GK LE+ YV EE +LKNI EA+ P  V LSIY +AFVKG  TNF+IEPSFGVEA  +YPDVKYT +DE LNQ+V
Sbjct:  225 ELVSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308          
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.344e-22
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQFV 253
            +L+SLWE+K GKT  +EYV EE +LK I E+  P  +IL+I  +AFV+G QT F+I+P+ GV+A  LYPDVKYTTVDEYLN+F+
Sbjct:  226 ELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309          
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.196e-20
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQF 250
            ++V+LWE+KIGK+LEK ++ EE LLK+I E+  P  V+LSI  + FV G  TN  IEPSFGVEA  LYPDVKYT+VDEYL+ F
Sbjct:  228 EIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309          
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.728e-19
Identity = 46/84 (54.76%), Postives = 64/84 (76.19%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQFV 253
            ++++LWE+KIGKTLEK YVSEE +LK+I E++ PH  +L++Y S  +KG    ++I+P+  +EA   YPDV YTT DEYLNQFV
Sbjct:  236 EVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318          
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.256e-19
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQFV 253
            ++++LWE+KIGKTLEK YVSEE +LK+I  ++ PH  +L++Y S  +KG    ++I+P+  VEA   YPDVKYTT DEYLNQFV
Sbjct:  236 EVIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG-DAVYEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318          
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.026e-19
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQFV 253
            ++VSLWE+KIGKTLEK Y+SEE +LK+I  +  PH  +L++Y S  +KG    ++I+P+   EA  LYPDVKYTT DEYL+QFV
Sbjct:  236 EVVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG-DAVYEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318          
BLAST of DY260290 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 8.574e-19
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 2
Query:    2 DLVSLWERKIGKTLEKEYVSEEPLLKNIPEAAPPHKVILSIYPSAFVKGVQTNFKIEPSFGVEAPPLYPDVKYTTVDEYLNQFV 253
            ++VSLWE KIGKTLEK Y+SEE +L+ + E   P +  L+I  S FV G   NF+++P  GVEA  LYP VKYTTVDE+ N+FV
Sbjct:  227 EIVSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310          
The following BLAST results are available for this feature:
BLAST of DY260290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
IFRH_SOLTU8.006e-2567.86Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_MAIZE6.344e-2259.52Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_ARATH1.196e-2061.45Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_MEDSA1.728e-1954.76Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA2.256e-1955.95Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFR_CICAR5.026e-1955.95Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFRH_TOBAC8.574e-1955.95Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YA19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260290 ID=DY260290; Name=DY260290; organism=Citrus clementina; type=EST; length=1196bp
TGATCTTGTGTCTTTGTGGGAGAGAAAGATTGGTAAAACCCTCGAAAAGG
AGTATGTTTCAGAGGAGCCGCTCCTAAAGAATATTCCAGAAGCTGCCCCT
CCACACAAAGTGATATTATCAATTTATCCCTCTGCTTTCGTGAAGGGAGT
TCAAACCAACTTCAAGATTGAACCATCTTTTGGAGTTGAAGCCCCCCCGC
TTTATCCTGATGTCAAGTACACTACCGTTGATGAGTACCTCAATCAGTTT
GTGTAACCCCTTCGCCGTTTCCCGCTGCAGCTTGCCGGATCTTGGACTGT
TGGTAACTAAACAATTGGCTTGTTGCCCCCTTTGGTTTTCACATGTAAAA
ATTATGGTTGTTGGCCCTACTTCCTTCTGGTTGCCCATGCGCCTTTGTTA
CACCCCTCCCCCGCCCCCCCCGTCCCGCTCCCACGCCCCTCGCCCCCGCC
TCCCACCCGACACATCCCCCGCCAATCCCCTCCTGCCCTTCCCGAACACC
AGCTTCCCGGCCGCTCCCCCTGCTCCCCCCCCCTCCCCATCCCCACCGCC
TCAGCACGAGCTCTTGCCTCCCCCGCGCCCCCACTCCACCCCCCCACCTC
TTCCCCTGCCCCCCCGCCCCACCCCTCTCCCCCCCCCCCCCCCCCCTCAC
CTTCTCCTCCTCCGCGTATCTACCTCCCGGCTTCCTGCTTATCCTCCACC
GCCTCGCTCCCCCCCCCCCCCTGGCTCGCAAGCCGCGCCCTCCTCTGCCC
CTACCCCTAACCCCCACCACCTACCCCCCTACACTCCCCCCTCCCTCTCT
CCTCCACCCATACTCCCTTCGTTCCCCCCCTTTCCCACAACTTCCCACTA
GTCCCCCCCCCTCACTCTCCCCCGCCTCCTCCCTCCGTCCTCCCTCTTCA
TTCCCTCCCCTTCTCTTCTTAAACCCCCCACGCTCTCCCCCTCTCACCCC
TCACCTCCCCATCCCCCCCCCCCGCCGCCGTCCGACCGCCCCCCCCTCCC
CTCCCCCCTCCCCCCCCCCTCCCCCGATCGCCCCCTACCCCTCTCACACA
CCCAGCTCTTGCATCCTGACCCCCCCCCCCGCACCCCCACCCTCCTCCCC
GCCCATCCCCCTCCTACGCCCCCCCCCCCCCTCCCCCCCTCCCCCCTTCC
AGCCTCTACCAATTCTCCCCCGCACCCCTCCCCGCTCCCCCTCCAC
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