DY260296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2) HSP 1 Score: 353.214 bits (905), Expect = 1.584e-96 Identity = 171/233 (73.39%), Postives = 197/233 (84.55%), Query Frame = 2 Query: 26 LFSHQPNKVKAPTQAXXXXXXXXXXXXXXXXXXXXFKSTLSANPLQSPLSLGPHRPLDPNNGAAIRRASIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGLKIRKT 724 LF+H PNKVK PTQA FKST++ANPLQSPLS+ P RP+DP++ AA+RRA++VWFRNDLRVH NE LN+AN+E VSVLPVYCFDPRDYGKSSSGFDKTGP+RA FLIESVS+LRKNLQARGS+LVVRVGKPE VLVELAK IGADAVYAHREVSHDEVK+E KIE AMK+EG+EVKYFWGSTLYHLDDLPFK+ ++P+NYG F++KV+ L+IRKT Sbjct: 49 LFAHHPNKVKIPTQASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKEEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKT 281
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 7.478e-38 Identity = 74/157 (47.13%), Postives = 111/157 (70.70%), Query Frame = 2 Query: 233 IVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 703 +VW+RNDLRVH +E L +A +++ V+ +YCFDPR +GK+ GF+KTGP+RA FL+ESV+DLR++L+ GSDL+VR G PE V+ L + AV+ H EV+ +E+ E ++AA+ + V+ FWG+TL H DDLPF + +P + FR++V+ Sbjct: 7 LVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLLESVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVERDLQAALAPLNVPVRSFWGTTLVHPDDLPFAIEAIPELFTDFRKQVE 163
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 4.537e-35 Identity = 69/161 (42.86%), Postives = 107/161 (66.46%), Query Frame = 2 Query: 233 IVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGLKI 715 +VWFRNDLR+H +E L+ A +++ VYC+DPR + ++ GF KTGP+R++FL +SV +L ++LQ G+ L+V G PE V+ ++AK I A +Y HREV+ +E+ E + + GIE K +WGSTL H +DLPF + ++P + FR+ ++ KI Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTILGIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKI 169
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 4.246e-33 Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 230 SIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSS-GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEG--IEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 703 +I+WFRNDLRV N++L A + S ++LPVYC DPR + + F KTG R FL+E + DLRKNL RG +L++R GKPE +L LAK GA V+AH+E +EV E + +K G +++ WGST+YH DDLPF + ++P Y FR+ V+ Sbjct: 86 TILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVE 246
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 9.460e-33 Identity = 76/163 (46.63%), Postives = 101/163 (61.96%), Query Frame = 2 Query: 224 RASIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYA-HREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFK-LGEMPTNYGGFREKVK 703 R I RNDLR+H NE + A + ++P+YCFDPR Y G F KTGP+R FL++SV DLR L+ GS L+VR GKPE V+ EL K +G+ + A H EV+ +E EEK++ + V+ FWGSTLYH DDLPF +G +P Y FR+ V+ Sbjct: 5 RTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVE 167
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.107e-32 Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 2 Query: 224 RASIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIG-ADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFK-LGEMPTNYGGFREKVKGL-KIRKT 724 R I RNDLR+H NE L+ A+ + ++P+YCFDPR Y G F KTGP+R FL+ESV DLR L+ +GS+L++R GKPE V+ +L K +G AV H E + +E E ++ A GI+ + FWGSTLYH +DLPF+ + +P Y FR+ V+ K+R T Sbjct: 6 RVIICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESVRDLRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDVESAVKQACTRLGIKYQTFWGSTLYHREDLPFRHISSLPDVYTQFRKAVETQGKVRPT 176
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.107e-32 Identity = 76/174 (43.68%), Postives = 104/174 (59.77%), Query Frame = 2 Query: 230 SIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSS--GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAM--------------KDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 703 +IVWFRNDLRV NE++ A S +VLPVYC DPR S+ GF KTG RA FLIE + DL++NL +G DL++R GKPE +L +AKA+ A VYAH+E +E+ E + + K +++ WG+TLYH+DDLPF + +P Y FR+ V+ Sbjct: 86 AIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNPKLQLIWGATLYHVDDLPFSVNNLPDVYTQFRKAVE 259
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 2.752e-32 Identity = 77/175 (44.00%), Postives = 107/175 (61.14%), Query Frame = 2 Query: 230 SIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSS-GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK------------DEG----IEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 703 +IVWFRNDLRV NE+L A S ++LPVYC DPR +G + G KTG RA F+IE ++DL++NL RG DL+++ GKPE ++ LAKA A VYAH+E +EVK E+ + ++ D G +++ WGST+YH+DDLPF +P Y FR+ V+ Sbjct: 80 AIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIECLNDLKRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEEVKVEKMVTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLPFDCESLPDVYTQFRKSVE 254
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 3.720e-29 Identity = 62/158 (39.24%), Postives = 96/158 (60.76%), Query Frame = 2 Query: 230 SIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 703 ++VWFRNDLR +E A+ V+C DPR + + GF +TGP+RA FLIE+++DLR L++ G +L+VRVG+PETVL L ++ DAV+ H E +E + E ++ GI +G TL H D+LPF++ + P + FR++++ Sbjct: 4 ALVWFRNDLRTIDHEPFLRASTAD-RCFAVHCIDPRQFETTELGFQRTGPFRARFLIENLTDLRSRLRSLGGELIVRVGRPETVLQHLLPSLAIDAVHFHHEPRTEEADTAESVQQLCDQHGIATHVAYGDTLIHPDELPFEIADTPELFTDFRKEIE 160
BLAST of DY260296 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.082e-28 Identity = 67/158 (42.41%), Postives = 101/158 (63.92%), Query Frame = 2 Query: 230 SIVWFRNDLRVHGNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 703 ++VWFR+DLRV N +L A + +V+PVY FDP Y +S G KTG +RA F ++V+DLR +L+ RG DL+VR G+P TV+ ELA+ GADAVYA + + +E + + +A+ D GI ++ W TLYH DDLP ++ + +R++ + Sbjct: 4 AVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEYGPPKTGGHRAVFRRQAVADLRASLRDRGGDLLVRSGRPATVVPELAQRAGADAVYAQTKPATEERRRAADVASALDDAGIALRQRWTHTLYHPDDLPTPPTDIDDTFTPWRKETE 161 The following BLAST results are available for this feature:
BLAST of DY260296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260296 ID=DY260296; Name=DY260296; organism=Citrus clementina; type=EST; length=1118bpback to top |